-
1
-
-
0035166973
-
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
-
Apweiler, R., et al. 2001. The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res. 29:37-40. (Pubitemid 32054401)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.1
, pp. 37-40
-
-
Apweiler, R.1
Attwood, T.K.2
Bairoch, A.3
Bateman, A.4
Birney, E.5
Biswas, M.6
Bucher, P.7
Cerutti, L.8
Corpet, F.9
Croning, M.D.R.10
Durbin, R.11
Falquet, L.12
Fleischmann, W.13
Gouzy, J.14
Hermjakob, H.15
Hulo, N.16
Jonassen, I.17
Kahn, D.18
Kanapin, A.19
Karavidopoulou, Y.20
Lopez, R.21
Marx, B.22
Mulder, N.J.23
Oinn, T.M.24
Pagni, M.25
Servant, F.26
Sigrist, C.J.A.27
Zdobnov, E.M.28
more..
-
2
-
-
0032694256
-
Yersinia enterocolitica: Overview and epidemiologic correlates
-
Bottone, E. J. 1999. Yersinia enterocolitica: Overview and epidemiologic correlates. Microbes Infect. 1:323-333.
-
(1999)
Microbes Infect.
, vol.1
, pp. 323-333
-
-
Bottone, E.J.1
-
3
-
-
0031002852
-
Yersinia enterocolitica: The charisma continues
-
Bottone, E. J. 1997. Yersinia enterocolitica: The charisma continues. Clin. Microbiol. Rev. 10:257-276. (Pubitemid 27196671)
-
(1997)
Clinical Microbiology Reviews
, vol.10
, Issue.2
, pp. 257-276
-
-
Bottone, E.J.1
-
4
-
-
38849176797
-
Presence of a functional flagellar cluster Flag-2 and low-temperature expression of flagellar genes in Yersinia enterocolitica W22703
-
DOI 10.1099/mic.0.2007/008458-0
-
Bresolin, G., J. Trcek, S. Scherer, and T. M. Fuchs. 2008. Presence of a functional flagellar cluster Flag-2 and low-temperature expression of flagellar genes in Yersinia enterocolitica W22703. Microbiology 154:196-206. (Pubitemid 351201399)
-
(2008)
Microbiology
, vol.154
, Issue.1
, pp. 196-206
-
-
Bresolin, G.1
Trcek, J.2
Scherer, S.3
Fuchs, T.M.4
-
5
-
-
77349121865
-
Genomic characterization of the Yersinia genus
-
Chen, P. E., et al. 2010. Genomic characterization of the Yersinia genus. Genome Biol. 11:R1.
-
(2010)
Genome Biol.
, vol.11
-
-
Chen, P.E.1
-
7
-
-
33845477449
-
The translocated Salmonella effector proteins SseF and SseG interact and are required to establish an intracellular replication niche
-
DOI 10.1128/IAI.00648-06
-
Deiwick, J., et al. 2006. The translocated Salmonella effector proteins SseF and SseG interact and are required to establish an intracellular replication niche. Infect. Immun. 74:6965-6972. (Pubitemid 44913172)
-
(2006)
Infection and Immunity
, vol.74
, Issue.12
, pp. 6965-6972
-
-
Deiwick, J.1
Salcedo, S.P.2
Boucrot, E.3
Gilliland, S.M.4
Henry, T.5
Petermann, N.6
Waterman, S.R.7
Gorvel, J.-P.8
Holden, D.W.9
Meresse, S.10
-
8
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
Delcher, A. L., D. Harmon, S. Kasif, O. White, and S. L. Salzberg. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 7:4636-4641.
-
(1999)
Nucleic Acids Res
, vol.7
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
9
-
-
33845456098
-
Release of immunity protein requires functional endonuclease colicin import machinery
-
DOI 10.1128/JB.00941-06
-
Duche, D., A. Frenkian, V. Prima, and R. Lloubes. 2006. Release of immunity protein requires functional endonuclease colicin import machinery. J. Bacteriol. 188:8593-8600. (Pubitemid 44894060)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.24
, pp. 8593-8600
-
-
Duche, D.1
Frenkian, A.2
Prima, V.3
Lloubes, R.4
-
10
-
-
34848890360
-
Acute oral toxicity of Yersinia pseudotuberculosis to fleas: Implications for the evolution of vector-borne transmission of plague
-
DOI 10.1111/j.1462-5822.2007.00986.x
-
Erickson, D. L., et al. 2007. Acute oral toxicity of Yersinia pseudotuberculosis to fleas: Implications for the evolution of vector-borne transmission of plague. Cell. Microbiol. 9:2658-2666. (Pubitemid 47500517)
-
(2007)
Cellular Microbiology
, vol.9
, Issue.11
, pp. 2658-2666
-
-
Erickson, D.L.1
Waterfield, N.R.2
Vadyvaloo, V.3
Long, D.4
Fischer, E.R.5
Ffrench-constant, R.6
Hinnebusch, B.J.7
-
11
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleischmann, R. D., et al. 1995. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269:496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
-
13
-
-
58149253184
-
Insecticidal genes of Yersinia spp.: Taxonomical distribution, contribution to toxicity towards Manduca sexta and Galleria mellonella, and evolution
-
Fuchs, T. M., G. Bresolin, L. Marcinowski, J. Schachtner, and S. Scherer. 2008. Insecticidal genes of Yersinia spp.: Taxonomical distribution, contribution to toxicity towards Manduca sexta and Galleria mellonella, and evolution. BMC Microbiol. 8:214.
-
(2008)
BMC Microbiol.
, vol.8
, pp. 214
-
-
Fuchs, T.M.1
Bresolin, G.2
Marcinowski, L.3
Schachtner, J.4
Scherer, S.5
-
14
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., C. Abajian, and P. Green. 1998. Consed: A graphical tool for sequence finishing. Genome Res. 8:195-202. (Pubitemid 28177231)
-
(1998)
Genome Research
, vol.8
, Issue.3
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
15
-
-
0037252684
-
Rfam: An RNA family database
-
DOI 10.1093/nar/gkg006
-
Griffiths-Jones, S., A. Bateman, M. Marshall, A. Khanna, and S. R. Eddy. 2003. Rfam: An RNA family database. Nucleic Acids Res. 31:439-441. (Pubitemid 36150423)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 439-441
-
-
Griffiths-Jones, S.1
Bateman, A.2
Marshall, M.3
Khanna, A.4
Eddy, S.R.5
-
16
-
-
0025073818
-
Involvement of M cells in the bacterial invasion of Peyer's patches: A common mechanism shared by Yersinia enterocolitica and other enteroinvasive bacteria
-
Grutzkau, A., C. Hanski, H. Hahn, and E. O. Riecken. 1990. Involvement of M cells in the bacterial invasion of Peyer's patches: A common mechanism shared by Yersinia enterocolitica and other enteroinvasive bacteria. Gut 31: 1011-1015. (Pubitemid 20295936)
-
(1990)
Gut
, vol.31
, Issue.9
, pp. 1011-1015
-
-
Grutzkau, A.1
Hanski, C.2
Hahn, H.3
Riecken, E.O.4
-
17
-
-
57349084643
-
The Yersinia pseudotuberculosis and Yersinia pestis toxin complex is active against cultured mammalian cells
-
Hares, M. C., et al. 2008. The Yersinia pseudotuberculosis and Yersinia pestis toxin complex is active against cultured mammalian cells. Microbiology 154: 3503-3517.
-
(2008)
Microbiology
, vol.154
, pp. 3503-3517
-
-
Hares, M.C.1
-
18
-
-
41449117022
-
Comparative analysis of the Photorhabdus luminescens and the Yersinia enterocolitica genomes: Uncovering candidate genes involved in insect pathogenicity
-
Heermann, R., and T. M. Fuchs. 2008. Comparative analysis of the Photorhabdus luminescens and the Yersinia enterocolitica genomes: Uncovering candidate genes involved in insect pathogenicity. BMC Genomics 9:40.
-
(2008)
BMC Genomics
, vol.9
, pp. 40
-
-
Heermann, R.1
Fuchs, T.M.2
-
19
-
-
33646596541
-
Application of comparative phylogenomics to study the evolution of Yersinia enterocolitica and to identify genetic differences relating to pathogenicity
-
DOI 10.1128/JB.188.10.3645-3653.2006
-
Howard, S. L., et al. 2006. Application of comparative phylogenomics to study the evolution of Yersinia enterocolitica and to identify genetic differences relating to pathogenicity. J. Bacteriol. 188:3645-3653. (Pubitemid 43726228)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.10
, pp. 3645-3653
-
-
Howard, S.L.1
Gaunt, M.W.2
Hinds, J.3
Witney, A.A.4
Stabler, R.5
Wren, B.W.6
-
20
-
-
0031864184
-
Type III protein secretion systems in bacterial pathogens of animals and plants
-
Hueck, C. J. 1998. Type III protein secretion systems in bacterial pathogens of animals and plants. Microbiol. Mol. Biol. Rev. 62:379-433. (Pubitemid 28270280)
-
(1998)
Microbiology and Molecular Biology Reviews
, vol.62
, Issue.2
, pp. 379-433
-
-
Hueck, C.J.1
-
21
-
-
0037378869
-
Novel virulence-associated type II secretion system unique to high-pathogenicity Yersinia enterocolitica
-
DOI 10.1128/IAI.71.4.1872-1879.2003
-
Iwobi, A., et al. 2003. Novel virulence-associated type II secretion system unique to high-pathogenicity Yersinia enterocolitica. Infect. Immun. 71:1872-1879. (Pubitemid 36368718)
-
(2003)
Infection and Immunity
, vol.71
, Issue.4
, pp. 1872-1879
-
-
Iwobi, A.1
Heesemann, J.2
Garcia, E.3
Igwe, E.4
Noelting, C.5
Rakin, A.6
-
23
-
-
0035399931
-
Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes
-
DOI 10.1016/S0966-842X(01)02079-0, PII S0966842X01020790
-
Karlin, S. 2001. Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes. Trends Microbiol. 9:335-343. (Pubitemid 32575278)
-
(2001)
Trends in Microbiology
, vol.9
, Issue.7
, pp. 335-343
-
-
Karlin, S.1
-
24
-
-
72749105684
-
Ubiquitination of the bacterial inositol phosphatase, SopB, regulates its biological activity at the plasma membrane
-
Knodler, L. A., S. Winfree, D. Drecktrah, R. Ireland, and O. Steele-Mortimer. 2009. Ubiquitination of the bacterial inositol phosphatase, SopB, regulates its biological activity at the plasma membrane. Cell. Microbiol. 11:1652-1670.
-
(2009)
Cell. Microbiol.
, vol.11
, pp. 1652-1670
-
-
Knodler, L.A.1
Winfree, S.2
Drecktrah, D.3
Ireland, R.4
Steele-Mortimer, O.5
-
26
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz, S., et al. 2004. Versatile and open software for comparing large genomes. Genome Biol. 5:R12.
-
(2004)
Genome Biol.
, vol.5
-
-
Kurtz, S.1
-
27
-
-
0026092354
-
Yersinia enterocolitica O: 3: An emerging cause of pediatric gastroenteritis in the United States. The yersinia enterocolitica collaborative study group
-
Lee, L. A., et al. 1991. Yersinia enterocolitica O:3: An emerging cause of pediatric gastroenteritis in the United States. The Yersinia enterocolitica Collaborative Study Group. J. Infect. Dis. 163:660-663.
-
(1991)
J. Infect. Dis.
, vol.163
, pp. 660-663
-
-
Lee, L.A.1
-
28
-
-
0030854739
-
TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
DOI 10.1093/nar/25.5.955
-
Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964. (Pubitemid 27298263)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.5
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
29
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
DOI 10.1038/nature03959, PII N03959
-
Margulies, M., et al. 2005. Genome sequencing in microfabricated highdensity picolitre reactors. Nature 437:376-380. (Pubitemid 41613494)
-
(2005)
Nature
, vol.437
, Issue.7057
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.-J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.I.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.-B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
Lohman, K.L.31
Lu, H.32
Makhijani, V.B.33
McDade, K.E.34
McKenna, M.P.35
Myers, E.W.36
Nickerson, E.37
Nobile, J.R.38
Plant, R.39
Puc, B.P.40
Ronan, M.T.41
Roth, G.T.42
Sarkis, G.J.43
Simons, J.F.44
Simpson, J.W.45
Srinivasan, M.46
Tartaro, K.R.47
Tomasz, A.48
Vogt, K.A.49
Volkmer, G.A.50
Wang, S.H.51
Wang, Y.52
Weiner, M.P.53
Yu, P.54
Begley, R.F.55
Rothberg, J.M.56
more..
-
31
-
-
3042703212
-
Comparison of the biotypes of Yersinia enterocolitica isolated from pigs, cattle and sheep at slaughter and from humans with yersiniosis in Great Britain during 1999-2000
-
DOI 10.1111/j.1472-765X.2004.01548.x
-
McNally, A., et al. 2004. Comparison of the biotypes of Yersinia enterocolitica isolated from pigs, cattle and sheep at slaughter and from humans with yersiniosis in Great Britain during 1999-2000. Lett. Appl. Microbiol. 39:103-108. (Pubitemid 38869815)
-
(2004)
Letters in Applied Microbiology
, vol.39
, Issue.1
, pp. 103-108
-
-
McNally, A.1
Cheasty, T.2
Fearnley, C.3
Dalziel, R.W.4
Paiba, G.A.5
Manning, G.6
Newell, D.G.7
-
32
-
-
37049001662
-
Pig herds free from human pathogenic Yersinia enterocolitica
-
Nesbakken, T., T. Iversen, and B. Lium. 2007. Pig herds free from human pathogenic Yersinia enterocolitica. Emerg. Infect. Dis. 13:1860-1864. (Pubitemid 350248487)
-
(2007)
Emerging Infectious Diseases
, vol.13
, Issue.12
, pp. 1860-1864
-
-
Nesbakken, T.1
Iversen, T.2
Lium, B.3
-
33
-
-
0034805338
-
SseBCD proteins are secreted by the type III secretion system of Salmonella pathogenicity island 2 and function as a translocon
-
DOI 10.1128/JB.183.20.6036-6045.2001
-
Nikolaus, T., et al. 2001. SseBCD proteins are secreted by the type III secretion system of Salmonella pathogenicity island 2 and function as a translocon. J. Bacteriol. 183:6036-6045. (Pubitemid 32917423)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.20
, pp. 6036-6045
-
-
Nikolaus, T.1
Deiwick, J.2
Rappl, C.3
Freeman, J.A.4
Schroder, W.5
Miller, S.I.6
Hensel, M.7
-
34
-
-
0242664748
-
The Export of Coat Protein from Enteroaggregative Escherichia coli by a Specific ATP-binding Cassette Transporter System
-
DOI 10.1074/jbc.M306413200
-
Nishi, J., et al. 2003. The export of coat protein from enteroaggregative Escherichia coli by a specific ATP-binding cassette transporter system. J. Biol. Chem. 278:45680-45689. (Pubitemid 37432710)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.46
, pp. 45680-45689
-
-
Nishi, J.1
Sheikh, J.2
Mizuguchi, K.3
Luisi, B.4
Burland, V.5
Boutin, A.6
Rose, D.J.7
Blattner, F.R.8
Nataro, J.P.9
-
35
-
-
0031935001
-
The yersiniabactin biosynthetic gene cluster of Yersinia enterocolitica: Organization and siderophore-dependent regulation
-
Pelludat, C., A. Rakin, C. A. Jacobi, S. Schubert, and J. Heesemann. 1998. The yersiniabactin biosynthetic gene cluster of Yersinia enterocolitica: Organization and siderophore-dependent regulation. J. Bacteriol. 180:538-546. (Pubitemid 28100534)
-
(1998)
Journal of Bacteriology
, vol.180
, Issue.3
, pp. 538-546
-
-
Pelludat, C.1
Rakin, A.2
Jacobi, C.A.3
Schubert, S.4
Heesemann, J.5
-
37
-
-
33644873699
-
ISfinder: The reference centre for bacterial insertion sequences
-
Siguier, P., J. Perochon, L. Lestrade, J. Mahillon, and M. Chandler. 2006. ISfinder: The reference centre for bacterial insertion sequences. Nucleic Acids Res. 34:D32-D36.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Siguier, P.1
Perochon, J.2
Lestrade, L.3
Mahillon, J.4
Chandler, M.5
-
38
-
-
0035162592
-
The COG database: New developments in phylogenetic classification of proteins from complete genomes
-
Tatusov, R. L., et al. 2001. The COG database: New developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res. 29:22-28. (Pubitemid 32054398)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.1
, pp. 22-28
-
-
Tatusov, R.L.1
Natale, D.A.2
Garkavtsev, I.V.3
Tatusova, T.A.4
Shankavaram, U.T.5
Rao, B.S.6
Kiryutin, B.7
Galperin, M.Y.8
Fedorova, N.D.9
Koonin, E.V.10
-
39
-
-
33845999944
-
The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081
-
Thomson, N. R., et al. 2006. The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081. PLoS Genet. 2:e206.
-
(2006)
PLoS Genet.
, vol.2
-
-
Thomson, N.R.1
-
40
-
-
33749515943
-
An extensive repetoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination
-
DOI 10.1073/pnas.0604891103
-
Tobe, T., et al. 2006. An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination. Proc. Natl. Acad. Sci. U. S. A. 103:14941-14946. (Pubitemid 44527833)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.40
, pp. 14941-14946
-
-
Tobe, T.1
Beatson, S.A.2
Taniguchi, H.3
Abe, H.4
Bailey, C.M.5
Fivian, A.6
Younis, R.7
Matthews, S.8
Marches, O.9
Frankel, G.10
Hayashi, T.11
Pallen, M.J.12
-
41
-
-
23944488316
-
Environmental regulation and virulence attributes of the Ysa type III secretion system of Yersinia enterocolitica biovar 1B
-
DOI 10.1128/IAI.73.9.5961-5977.2005
-
Venecia, K., and G. M. Young. 2005. Environmental regulation and virulence attributes of the Ysa type III secretion system of Yersinia enterocolitica biovar 1B. Infect. Immun. 73:5961-5977. (Pubitemid 41193035)
-
(2005)
Infection and Immunity
, vol.73
, Issue.9
, pp. 5961-5977
-
-
Venecia, K.1
Young, G.M.2
-
42
-
-
70349687274
-
Distribution of pathogenic Yersinia enterocolitica in China
-
Wang, X., et al. 2009. Distribution of pathogenic Yersinia enterocolitica in China. Eur. J. Clin. Microbiol. Infect. Dis. 28:1237-1244.
-
(2009)
Eur. J. Clin. Microbiol. Infect. Dis.
, vol.28
, pp. 1237-1244
-
-
Wang, X.1
-
43
-
-
77951792188
-
Pathogenic strains of Yersinia enterocolitica isolated from domestic dogs (Canis familiaris) belonging to farmers are of the same subtype as pathogenic Y. enterocolitica strains isolated from humans and may be a source of human infection in Jiangsu Province, China
-
Wang, X., et al. 2010. Pathogenic strains of Yersinia enterocolitica isolated from domestic dogs (Canis familiaris) belonging to farmers are of the same subtype as pathogenic Y. enterocolitica strains isolated from humans and may be a source of human infection in Jiangsu Province, China. J. Clin. Microbiol. 48:1604-1610.
-
(2010)
J. Clin. Microbiol.
, vol.48
, pp. 1604-1610
-
-
Wang, X.1
-
44
-
-
47349099158
-
O:8 serotype Yersinia enterocolitica strains in China
-
Wang, X., et al. 2008. O:8 serotype Yersinia enterocolitica strains in China. Int. J. Food Microbiol. 125:259-266.
-
(2008)
Int. J. Food Microbiol.
, vol.125
, pp. 259-266
-
-
Wang, X.1
-
45
-
-
0036170459
-
LcrQ and SycH function together at the Ysc type III secretion system in Yersinia pestis to impose a hierarchy of secretion
-
DOI 10.1046/j.1365-2958.2002.02752.x
-
Wulff-Strobel, C. R., A. W. Williams, and S. C. Straley. 2002. LcrQ and SycH function together at the Ysc type III secretion system in Yersinia pestis to impose a hierarchy of secretion. Mol. Microbiol. 43:411-423. (Pubitemid 34146731)
-
(2002)
Molecular Microbiology
, vol.43
, Issue.2
, pp. 411-423
-
-
Wulff-Strobel, C.R.1
Williams, A.W.2
Straley, S.C.3
|