메뉴 건너뛰기




Volumn 10, Issue 4, 2011, Pages 1728-1736

Large-scale phosphoproteomics analysis of whole saliva reveals a distinct phosphorylation pattern

Author keywords

dynamic range compression; mass spectrometry; phosphoproteomics; whole saliva

Indexed keywords

CASEIN KINASE; GLYCOPROTEIN; HEXAPEPTIDE; PHOSPHOPROTEIN; PLASMA PROTEIN; PROLINE; SALIVA PROTEIN;

EID: 79953716847     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr1010247     Document Type: Article
Times cited : (43)

References (30)
  • 1
    • 0037032835 scopus 로고    scopus 로고
    • The protein kinase complement of the human genome
    • DOI 10.1126/science.1075762
    • Manning, G.; Whyte, D. B.; Martinez, R.; Hunter, T.; Sudarsanam, S. The protein kinase complement of the human genome Science 2002, 298 (5600) 1912-34 (Pubitemid 35425239)
    • (2002) Science , vol.298 , Issue.5600 , pp. 1912-1934
    • Manning, G.1    Whyte, D.B.2    Martinez, R.3    Hunter, T.4    Sudarsanam, S.5
  • 2
    • 0034614490 scopus 로고    scopus 로고
    • Signaling - 2000 and beyond
    • Hunter, T. Signaling - 2000 and beyond Cell 2000, 100 (1) 113-27 (Pubitemid 30046300)
    • (2000) Cell , vol.100 , Issue.1 , pp. 113-127
    • Hunter, T.1
  • 3
    • 70449708959 scopus 로고    scopus 로고
    • Saliva as a tool for oral cancer diagnosis and prognosis
    • Nagler, R. M. Saliva as a tool for oral cancer diagnosis and prognosis Oral Oncol. 2009, 45 (12) 1006-10
    • (2009) Oral Oncol. , vol.45 , Issue.12 , pp. 1006-10
    • Nagler, R.M.1
  • 6
    • 50049110046 scopus 로고    scopus 로고
    • Characterization of the human cerebrospinal fluid phosphoproteome by titanium dioxide affinity chromatography and mass spectrometry
    • Bahl, J. M.; Jensen, S. S.; Larsen, M. R.; Heegaard, N. H. Characterization of the human cerebrospinal fluid phosphoproteome by titanium dioxide affinity chromatography and mass spectrometry Anal. Chem. 2008, 80 (16) 6308-16
    • (2008) Anal. Chem. , vol.80 , Issue.16 , pp. 6308-16
    • Bahl, J.M.1    Jensen, S.S.2    Larsen, M.R.3    Heegaard, N.H.4
  • 7
    • 76149133112 scopus 로고    scopus 로고
    • Characterization of the human plasma phosphoproteome using linear ion trap mass spectrometry and multiple search engines
    • Carrascal, M.; Gay, M.; Ovelleiro, D.; Casas, V.; Gelpi, E.; Abian, J. Characterization of the human plasma phosphoproteome using linear ion trap mass spectrometry and multiple search engines J. Proteome Res. 2010, 9 (2) 876-84
    • (2010) J. Proteome Res. , vol.9 , Issue.2 , pp. 876-84
    • Carrascal, M.1    Gay, M.2    Ovelleiro, D.3    Casas, V.4    Gelpi, E.5    Abian, J.6
  • 8
    • 58149464332 scopus 로고    scopus 로고
    • Profiling of endogenous serum phosphorylated peptides by titanium (IV) immobilized mesoporous silica particles enrichment and MALDI-TOFMS detection
    • Hu, L.; Zhou, H.; Li, Y.; Sun, S.; Guo, L.; Ye, M.; Tian, X.; Gu, J.; Yang, S.; Zou, H. Profiling of endogenous serum phosphorylated peptides by titanium (IV) immobilized mesoporous silica particles enrichment and MALDI-TOFMS detection Anal. Chem. 2009, 81 (1) 94-104
    • (2009) Anal. Chem. , vol.81 , Issue.1 , pp. 94-104
    • Hu, L.1    Zhou, H.2    Li, Y.3    Sun, S.4    Guo, L.5    Ye, M.6    Tian, X.7    Gu, J.8    Yang, S.9    Zou, H.10
  • 9
    • 52449093014 scopus 로고    scopus 로고
    • Identification of free phosphopeptides in different biological fluids by a mass spectrometry approach
    • Cirulli, C.; Chiappetta, G.; Marino, G.; Mauri, P.; Amoresano, A. Identification of free phosphopeptides in different biological fluids by a mass spectrometry approach Anal. Bioanal. Chem. 2008, 392 (1-2) 147-59
    • (2008) Anal. Bioanal. Chem. , vol.392 , Issue.1-2 , pp. 147-59
    • Cirulli, C.1    Chiappetta, G.2    Marino, G.3    Mauri, P.4    Amoresano, A.5
  • 12
    • 48949117187 scopus 로고    scopus 로고
    • Facts and artifacts in proteomics of body fluids. What proteomics of saliva is telling us?
    • DOI 10.1002/jssc.200800100
    • Messana, I.; Inzitari, R.; Fanali, C.; Cabras, T.; Castagnola, M. Facts and artifacts in proteomics of body fluids. What proteomics of saliva is telling us? J. Sep. Sci. 2008, 31 (11) 1948-63 (Pubitemid 352003180)
    • (2008) Journal of Separation Science , vol.31 , Issue.11 , pp. 1948-1963
    • Messana, I.1    Inzitari, R.2    Fanali, C.3    Cabras, T.4    Castagnola, M.5
  • 13
    • 77956874230 scopus 로고    scopus 로고
    • Large-scale phosphoproteome of human whole saliva using disulfide-thiol interchange covalent chromatography and mass spectrometry
    • Salih, E.; Siqueira, W. L.; Helmerhorst, E. J.; Oppenheim, F. G. Large-scale phosphoproteome of human whole saliva using disulfide-thiol interchange covalent chromatography and mass spectrometry Anal. Biochem. 2010, 407 (1) 19-33
    • (2010) Anal. Biochem. , vol.407 , Issue.1 , pp. 19-33
    • Salih, E.1    Siqueira, W.L.2    Helmerhorst, E.J.3    Oppenheim, F.G.4
  • 14
    • 57449099068 scopus 로고    scopus 로고
    • Precision proteomics: The case for high resolution and high mass accuracy
    • Mann, M.; Kelleher, N. L. Precision proteomics: the case for high resolution and high mass accuracy Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (47) 18132-8
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , Issue.47 , pp. 18132-8
    • Mann, M.1    Kelleher, N.L.2
  • 15
    • 71549145619 scopus 로고    scopus 로고
    • A dynamic range compression and three-dimensional peptide fractionation analysis platform expands proteome coverage and the diagnostic potential of whole saliva
    • Bandhakavi, S.; Stone, M. D.; Onsongo, G.; Van Riper, S. K.; Griffin, T. J. A dynamic range compression and three-dimensional peptide fractionation analysis platform expands proteome coverage and the diagnostic potential of whole saliva J. Proteome Res. 2009, 8 (12) 5590-600
    • (2009) J. Proteome Res. , vol.8 , Issue.12 , pp. 5590-600
    • Bandhakavi, S.1    Stone, M.D.2    Onsongo, G.3    Van Riper, S.K.4    Griffin, T.J.5
  • 16
    • 84984933087 scopus 로고    scopus 로고
    • The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry
    • Villen, J.; Gygi, S. P. The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry Nat. Protoc. 2008, 3 (10) 1630-8
    • (2008) Nat. Protoc. , vol.3 , Issue.10 , pp. 1630-8
    • Villen, J.1    Gygi, S.P.2
  • 17
    • 0037317228 scopus 로고    scopus 로고
    • Stop And Go Extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics
    • DOI 10.1021/ac026117i
    • Rappsilber, J.; Ishihama, Y.; Mann, M. Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics Anal. Chem. 2003, 75 (3) 663-70 (Pubitemid 36176744)
    • (2003) Analytical Chemistry , vol.75 , Issue.3 , pp. 663-670
    • Rappsilber, J.1    Ishihama, Y.2    Mann, M.3
  • 18
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • DOI 10.1021/ac025747h
    • Keller, A.; Nesvizhskii, A. I.; Kolker, E.; Aebersold, R. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search Anal. Chem. 2002, 74 (20) 5383-92 (Pubitemid 35215372)
    • (2002) Analytical Chemistry , vol.74 , Issue.20 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4
  • 19
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • DOI 10.1021/ac0341261
    • Nesvizhskii, A. I.; Keller, A.; Kolker, E.; Aebersold, R. A statistical model for identifying proteins by tandem mass spectrometry Anal. Chem. 2003, 75 (17) 4646-58 (Pubitemid 37082259)
    • (2003) Analytical Chemistry , vol.75 , Issue.17 , pp. 4646-4658
    • Nesvizhskii, A.I.1    Keller, A.2    Kolker, E.3    Aebersold, R.4
  • 22
    • 74049135503 scopus 로고    scopus 로고
    • Plucking, pillaging and plundering proteomes with combinatorial peptide ligand libraries
    • Righetti, P. G.; Boschetti, E.; Zanella, A.; Fasoli, E.; Citterio, A. Plucking, pillaging and plundering proteomes with combinatorial peptide ligand libraries J. Chromatogr., A 2010, 1217 (6) 893-900
    • (2010) J. Chromatogr., A , vol.1217 , Issue.6 , pp. 893-900
    • Righetti, P.G.1    Boschetti, E.2    Zanella, A.3    Fasoli, E.4    Citterio, A.5
  • 23
    • 33847616949 scopus 로고    scopus 로고
    • Reproducible isolation of distinct, overlapping segments of the phosphoproteome
    • DOI 10.1038/nmeth1005, PII NMETH1005
    • Bodenmiller, B.; Mueller, L. N.; Mueller, M.; Domon, B.; Aebersold, R. Reproducible isolation of distinct, overlapping segments of the phosphoproteome Nat. Methods 2007, 4 (3) 231-7 (Pubitemid 46358873)
    • (2007) Nature Methods , vol.4 , Issue.3 , pp. 231-237
    • Bodenmiller, B.1    Mueller, L.N.2    Mueller, M.3    Domon, B.4    Aebersold, R.5
  • 25
    • 0022623229 scopus 로고
    • The primary structure and functional characterization of the neutral histidine-rich polypeptide from human parotid secretion
    • Oppenheim, F. G.; Yang, Y. C.; Diamond, R. D.; Hyslop, D.; Offner, G. D.; Troxler, R. F. The primary structure and functional characterization of the neutral histidine-rich polypeptide from human parotid secretion J. Biol. Chem. 1986, 261 (3) 1177-82 (Pubitemid 16103924)
    • (1986) Journal of Biological Chemistry , vol.261 , Issue.3 , pp. 1177-1182
    • Oppenheim, F.G.1    Yang, Y.C.2    Diamond, R.D.3
  • 26
    • 0023888810 scopus 로고
    • Histatins, a novel family of histidine-rich proteins in human parotid secretion. Isolation, characterization, primary structure, and fungistatic effects on Candida albicans
    • Oppenheim, F. G.; Xu, T.; McMillian, F. M.; Levitz, S. M.; Diamond, R. D.; Offner, G. D.; Troxler, R. F. Histatins, a novel family of histidine-rich proteins in human parotid secretion. Isolation, characterization, primary structure, and fungistatic effects on Candida albicans J. Biol. Chem. 1988, 263 (16) 7472-7
    • (1988) J. Biol. Chem. , vol.263 , Issue.16 , pp. 7472-7
    • Oppenheim, F.G.1    Xu, T.2    McMillian, F.M.3    Levitz, S.M.4    Diamond, R.D.5    Offner, G.D.6    Troxler, R.F.7
  • 27
    • 0017348985 scopus 로고
    • Complete covalent structure of statherin, a tyrosine rich acidic peptide which inhibits calcium phosphate precipitation from human parotid saliva
    • Schlesinger, D. H.; Hay, D. I. Complete covalent structure of statherin, a tyrosine-rich acidic peptide which inhibits calcium phosphate precipitation from human parotid saliva J. Biol. Chem. 1977, 252 (5) 1689-95 (Pubitemid 8062367)
    • (1977) Journal of Biological Chemistry , vol.252 , Issue.5 , pp. 1689-1695
    • Schlesinger, D.H.1    Hay, D.I.2
  • 28
    • 2942598149 scopus 로고    scopus 로고
    • PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation
    • DOI 10.1002/pmic.200300772
    • Hornbeck, P. V.; Chabra, I.; Kornhauser, J. M.; Skrzypek, E.; Zhang, B. PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation Proteomics 2004, 4 (6) 1551-61 (Pubitemid 38738314)
    • (2004) Proteomics , vol.4 , Issue.6 , pp. 1551-1561
    • Hornbeck, P.V.1    Chabra, I.2    Kornhauser, J.M.3    Skrzypek, E.4    Zhang, B.5
  • 29
    • 0023732174 scopus 로고
    • Substrate-specificity determinants for a membrane-bound casein kinase of lactating mammary gland. A study with synthetic peptides
    • Meggio, F.; Boulton, A. P.; Marchiori, F.; Borin, G.; Lennon, D. P.; Calderan, A.; Pinna, L. A. Substrate-specificity determinants for a membrane-bound casein kinase of lactating mammary gland. A study with synthetic peptides Eur. J. Biochem. 1988, 177 (2) 281-4
    • (1988) Eur. J. Biochem. , vol.177 , Issue.2 , pp. 281-4
    • Meggio, F.1    Boulton, A.P.2    Marchiori, F.3    Borin, G.4    Lennon, D.P.5    Calderan, A.6    Pinna, L.A.7
  • 30
    • 77954594787 scopus 로고    scopus 로고
    • Motif analysis of phosphosites discloses a potential prominent role of the Golgi casein kinase (GCK) in the generation of human plasma phospho-proteome
    • Salvi, M.; Cesaro, L.; Tibaldi, E.; Pinna, L. A. Motif analysis of phosphosites discloses a potential prominent role of the Golgi casein kinase (GCK) in the generation of human plasma phospho-proteome J. Proteome Res. 2010, 9 (6) 3335-8
    • (2010) J. Proteome Res. , vol.9 , Issue.6 , pp. 3335-8
    • Salvi, M.1    Cesaro, L.2    Tibaldi, E.3    Pinna, L.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.