-
1
-
-
36849148382
-
Origin of life: the RNA world
-
Gilbert W, (1986) Origin of life: the RNA world. Nature pp. 319-618.
-
(1986)
Nature
, pp. 319-618
-
-
Gilbert, W.1
-
2
-
-
0001244368
-
Ribosomal RNA genes in plants: variability in copy number and in intergenic spacer
-
Rogers SO, Bendich AJ, (1987) Ribosomal RNA genes in plants: variability in copy number and in intergenic spacer. Plant Mol Biol 9: 509-520.
-
(1987)
Plant Mol Biol
, vol.9
, pp. 509-520
-
-
Rogers, S.O.1
Bendich, A.J.2
-
3
-
-
0026300584
-
Ribosomal DNA - molecular evolution and phylogenetic inference
-
Hillis DM, Dixon MT, (1991) Ribosomal DNA - molecular evolution and phylogenetic inference. Q Rev Biol 66: 410-453.
-
(1991)
Q Rev Biol
, vol.66
, pp. 410-453
-
-
Hillis, D.M.1
Dixon, M.T.2
-
4
-
-
0030056762
-
Conservation patterns in angiosperm ITS2 sequences
-
Hershkovitz MA, Zimmer EA, (1996) Conservation patterns in angiosperm ITS2 sequences. Nucleic Acids Res 24: 2857-2867.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2857-2867
-
-
Hershkovitz, M.A.1
Zimmer, E.A.2
-
5
-
-
0031292477
-
A conserved motif in the 5.8S ribosomal RNA (rRNA) gene is a useful diagnostic marker for plant internal transcribed spacer (ITS) sequence
-
Jobes DV, Thien LB, (1997) A conserved motif in the 5.8S ribosomal RNA (rRNA) gene is a useful diagnostic marker for plant internal transcribed spacer (ITS) sequence. Plant Mol Biol Rep 15: 326-334.
-
(1997)
Plant Mol Biol Rep
, vol.15
, pp. 326-334
-
-
Jobes, D.V.1
Thien, L.B.2
-
6
-
-
34250821680
-
Pan-eukaryote ITS2 homologies revealed by RNA secondary structure
-
Coleman AW, (2007) Pan-eukaryote ITS2 homologies revealed by RNA secondary structure. Nucleic Acids Res 35: 3322-3329.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3322-3329
-
-
Coleman, A.W.1
-
7
-
-
15444361843
-
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
-
Schultz J, Stefanie M, Gerlach D, Muller T, Wolf M, (2007) A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota. RNA 11: 361-364.
-
(2007)
RNA
, vol.11
, pp. 361-364
-
-
Schultz, J.1
Stefanie, M.2
Gerlach, D.3
Muller, T.4
Wolf, M.5
-
8
-
-
27144461969
-
Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures
-
Wolf M, Achtziger M, Schultz J, Dandekar T, (2005) Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures. Bioinformatics 11: 1616-1623.
-
(2005)
Bioinformatics
, vol.11
, pp. 1616-1623
-
-
Wolf, M.1
Achtziger, M.2
Schultz, J.3
Dandekar, T.4
-
9
-
-
42449146039
-
5.8S motifs for the identification of pseudogenic ITS regions
-
Harpke D, Peterson A, (2008a) 5.8S motifs for the identification of pseudogenic ITS regions. Botany 86: 300-305.
-
(2008)
Botany
, vol.86
, pp. 300-305
-
-
Harpke, D.1
Peterson, A.2
-
10
-
-
43449086680
-
Extensive 5.8S nrDNA polymorphism in Mammillaria (Cactaceae) with special reference to the identification of pseudogenic internal transcribed spacer region
-
Harpke D, Peterson A, (2008b) Extensive 5.8S nrDNA polymorphism in Mammillaria (Cactaceae) with special reference to the identification of pseudogenic internal transcribed spacer region. J Plant Res 121: 261-270.
-
(2008)
J Plant Res
, vol.121
, pp. 261-270
-
-
Harpke, D.1
Peterson, A.2
-
11
-
-
34447292525
-
Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs
-
Ochieng JW, Henry RJ, Baverstock PR, Steane DA, Shepherd M, (2007) Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs. Mol Phylogenet Evol 44: 752-764.
-
(2007)
Mol Phylogenet Evol
, vol.44
, pp. 752-764
-
-
Ochieng, J.W.1
Henry, R.J.2
Baverstock, P.R.3
Steane, D.A.4
Shepherd, M.5
-
12
-
-
76849085808
-
High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: Incomplete concerted evolution and the origin of pseudogenes
-
Xiao L-Q, Möller M, Zhu H, (2010) High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: Incomplete concerted evolution and the origin of pseudogenes. Mol Phylogenet Evol 55: 168-177.
-
(2010)
Mol Phylogenet Evol
, vol.55
, pp. 168-177
-
-
Xiao, L.-Q.1
Möller, M.2
Zhu, H.3
-
14
-
-
0000270001
-
The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny
-
Baldwin BG, Sanderson MJ, Porter MJ, Wojciechowski MF, Campbell CS, et al. (1995) The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann Mo Bot Gard 82: 247-277.
-
(1995)
Ann Mo Bot Gard
, vol.82
, pp. 247-277
-
-
Baldwin, B.G.1
Sanderson, M.J.2
Porter, M.J.3
Wojciechowski, M.F.4
Campbell, C.S.5
-
15
-
-
0029360612
-
Concerted evolution of repetitive DNA sequences in eukaryotes
-
Elder JF Jr, Turner BJ, (1995) Concerted evolution of repetitive DNA sequences in eukaryotes. Q Rev Biol 70: 297-320.
-
(1995)
Q Rev Biol
, vol.70
, pp. 297-320
-
-
Elder Jr., J.F.1
Turner, B.J.2
-
16
-
-
0028917850
-
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium)
-
Wendel JF, Schnabel A, Seelanan T, (1995) Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium). Proc Natl Acad Sci U S A 92: 280-284.
-
(1995)
Proc Natl Acad Sci U S A
, vol.92
, pp. 280-284
-
-
Wendel, J.F.1
Schnabel, A.2
Seelanan, T.3
-
17
-
-
0344613211
-
Ribosomal ITS sequences and plant phylogenetic inference
-
Alvarez I, Wendel JF, (2003) Ribosomal ITS sequences and plant phylogenetic inference. Mol Phylogenet Evol 29: 417-434.
-
(2003)
Mol Phylogenet Evol
, vol.29
, pp. 417-434
-
-
Alvarez, I.1
Wendel, J.F.2
-
18
-
-
0346091284
-
Concerted evolution of 18-5.8-26S rDNA repeats in Nicotiana allotetraploids
-
Kovařík A, Matyášek R, Lim KY, Skalická K, Koukalová B, et al. (2004) Concerted evolution of 18-5.8-26S rDNA repeats in Nicotiana allotetraploids. Biol J Linn Soc 82: 615-625.
-
(2004)
Biol J Linn Soc
, vol.82
, pp. 615-625
-
-
Kovařík, A.1
Matyášek, R.2
Lim, K.Y.3
Skalická, K.4
Koukalová, B.5
-
19
-
-
0000799135
-
Origin and evolution of the endemic genera of Gonosperminae (Asteraceae: Anthemideae) from the Canary Islands: Evidence from nucleotide sequences of the internal transcribed spacers of the nuclear ribosomal DNA
-
Francisco-Ortega J, Barber JC, Santos-Guerra A, Febles-Hernández R, Jansen RR, (2001) Origin and evolution of the endemic genera of Gonosperminae (Asteraceae: Anthemideae) from the Canary Islands: Evidence from nucleotide sequences of the internal transcribed spacers of the nuclear ribosomal DNA. Am J Bot 88: 161-169.
-
(2001)
Am J Bot
, vol.88
, pp. 161-169
-
-
Francisco-Ortega, J.1
Barber, J.C.2
Santos-Guerra, A.3
Febles-Hernández, R.4
Jansen, R.R.5
-
20
-
-
34247565560
-
Phylogenetics of Cucumis (Cucurbitaceae): Cucumber (C. sativus) belongs in an Asian/Australian clade far from melon (C. melo)
-
Available:. Accessed 2010 Aug 12
-
Renner SS, Schaefer H, Kocyan A, (2007) Phylogenetics of Cucumis (Cucurbitaceae): Cucumber (C. sativus) belongs in an Asian/Australian clade far from melon (C. melo). BMC Evol Biol 7: 58 Available:http://www.biomedcentral.com/1471-2148/7/58. Accessed 2010 Aug 12.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 58
-
-
Renner, S.S.1
Schaefer, H.2
Kocyan, A.3
-
21
-
-
53749086311
-
Phylogenetic patterns and conservation among North American members of the genus Agalinis (Orobanchaceae)
-
Available:. Accessed 2010 Aug 12
-
Pettengill JB, Neel MC, (2008) Phylogenetic patterns and conservation among North American members of the genus Agalinis (Orobanchaceae). BMC Evol Biol 8: 264 Available:http://www.biomedcentral.com/1471-2148/8/264. Accessed 2010 Aug 12.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 264
-
-
Pettengill, J.B.1
Neel, M.C.2
-
22
-
-
0036909225
-
Molecular phylogenetics of Hippophae L. (Elaegnaceae) based on the internal transcribed spacer (ITS) sequence of nrDNA
-
Sun K, Chen X, Ma R, Li C, Wang Q, et al. (2002) Molecular phylogenetics of Hippophae L. (Elaegnaceae) based on the internal transcribed spacer (ITS) sequence of nrDNA. Plant Syst Evol 235: 121-134.
-
(2002)
Plant Syst Evol
, vol.235
, pp. 121-134
-
-
Sun, K.1
Chen, X.2
Ma, R.3
Li, C.4
Wang, Q.5
-
23
-
-
33645367270
-
Phylogenetic relationships in Elymus (Poaceae: Triticeae) based on the nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences
-
Liu QL, Ge S, Tang HB, Zhang XL, Zhu GF, et al. (2006) Phylogenetic relationships in Elymus (Poaceae: Triticeae) based on the nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. New Phytol 170: 411-4206.
-
(2006)
New Phytol
, vol.170
, pp. 411-4206
-
-
Liu, Q.L.1
Ge, S.2
Tang, H.B.3
Zhang, X.L.4
Zhu, G.F.5
-
24
-
-
34548629813
-
Phylogenetic relationships and hybrid origin of Potamogeton species (Potamogetonaceae) distributed in China: insight from the nuclear ribosomal internal transcribed spacer sequence (ITS)
-
Wang QD, Zhang T, Wang JB, (2007) Phylogenetic relationships and hybrid origin of Potamogeton species (Potamogetonaceae) distributed in China: insight from the nuclear ribosomal internal transcribed spacer sequence (ITS). Plant Syst Evol 267: 65-78.
-
(2007)
Plant Syst Evol
, vol.267
, pp. 65-78
-
-
Wang, Q.D.1
Zhang, T.2
Wang, J.B.3
-
25
-
-
0141991410
-
The origin of Arabidopsis suecica as indicated by nuclear rDNA sequences
-
O'Kane SL, Schaal BA, Al-Shehbaz IA, (1996) The origin of Arabidopsis suecica as indicated by nuclear rDNA sequences. Syst Bot 21: 559-566.
-
(1996)
Syst Bot
, vol.21
, pp. 559-566
-
-
O'Kane, S.L.1
Schaal, B.A.2
Al-Shehbaz, I.A.3
-
26
-
-
0034847822
-
Inferring the history of the polyploid Silene aegaea (Caryophyllacea) using plastid and homeologous nuclear DNA sequences
-
Popp M, Oxelman B, (2001) Inferring the history of the polyploid Silene aegaea (Caryophyllacea) using plastid and homeologous nuclear DNA sequences. Mol Phylogenet Evol 20: 474-481.
-
(2001)
Mol Phylogenet Evol
, vol.20
, pp. 474-481
-
-
Popp, M.1
Oxelman, B.2
-
27
-
-
0026145634
-
Use of a genomic clone for ribosomal RNA from Brassica oleracea in RFLP analysis of Brassica species
-
Bennet RI, Smith AG, (1991) Use of a genomic clone for ribosomal RNA from Brassica oleracea in RFLP analysis of Brassica species. Plant Mol Biol 16: 685-688.
-
(1991)
Plant Mol Biol
, vol.16
, pp. 685-688
-
-
Bennet, R.I.1
Smith, A.G.2
-
28
-
-
0036273505
-
Hybrid origin and parentage of Dendrochilum acuiferum (Orchidaceae) infered in a phylogenetic context using nuclear and plastid DNA sequence data
-
Barkman TJ, Simpson BB, (2002) Hybrid origin and parentage of Dendrochilum acuiferum (Orchidaceae) infered in a phylogenetic context using nuclear and plastid DNA sequence data. Syst Bot 27: 209-220.
-
(2002)
Syst Bot
, vol.27
, pp. 209-220
-
-
Barkman, T.J.1
Simpson, B.B.2
-
29
-
-
34547416030
-
Ribosomal DNA in plant hybrids: inheritance, rearrangement, expression
-
Volkov RA, Komarova NY, Hemleben V, (2007) Ribosomal DNA in plant hybrids: inheritance, rearrangement, expression. Syst Biodivers 5: 261-276.
-
(2007)
Syst Biodivers
, vol.5
, pp. 261-276
-
-
Volkov, R.A.1
Komarova, N.Y.2
Hemleben, V.3
-
30
-
-
34247364671
-
Transcription activity of rRNA genes correlates with a tendency towards intergenomic homogenization in Nicotiana allotetraploids
-
Dadejová M, Lim KY, Součková-Skalická K, Matyášek R, Grandbastien M-A, et al. (2007) Transcription activity of rRNA genes correlates with a tendency towards intergenomic homogenization in Nicotiana allotetraploids. New Phytol 174: 658-668.
-
(2007)
New Phytol
, vol.174
, pp. 658-668
-
-
Dadejová, M.1
Lim, K.Y.2
Součková-Skalická, K.3
Matyášek, R.4
Grandbastien, M.-A.5
-
31
-
-
15544385627
-
Rapid concerted evolution of nuclear ribosomal DNA in two Tragopogon allopolyploids of recent and recurrent origin
-
Kovařík A, Pires JC, Leitch AR, Lim KY, Sherwood AM, et al. (2005) Rapid concerted evolution of nuclear ribosomal DNA in two Tragopogon allopolyploids of recent and recurrent origin. Genetics 169: 931-944.
-
(2005)
Genetics
, vol.169
, pp. 931-944
-
-
Kovařík, A.1
Pires, J.C.2
Leitch, A.R.3
Lim, K.Y.4
Sherwood, A.M.5
-
32
-
-
4344697413
-
Genome evolution in allotetraploid Nicotiana
-
Lim KY, Matyášek R, Kovařík A, Leitch A, (2004) Genome evolution in allotetraploid Nicotiana. Biol J Linn Soc 82: 599-606.
-
(2004)
Biol J Linn Soc
, vol.82
, pp. 599-606
-
-
Lim, K.Y.1
Matyášek, R.2
Kovařík, A.3
Leitch, A.4
-
33
-
-
0033059265
-
Elimination and rearrangement of parental rDNA in the allopolyploid Nicotiana tabacum
-
Volkov RA, Borisjuk NV, Panchuk II, Schweizer D, Hemleben V, (1999) Elimination and rearrangement of parental rDNA in the allopolyploid Nicotiana tabacum. Mol Biol Evol 16: 311-320.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 311-320
-
-
Volkov, R.A.1
Borisjuk, N.V.2
Panchuk, I.I.3
Schweizer, D.4
Hemleben, V.5
-
34
-
-
0034782104
-
Why nuclear ribosomal DNA spacers (ITS) tell us different stories in Quercus
-
Mayol M, Rosselló JA, (2001) Why nuclear ribosomal DNA spacers (ITS) tell us different stories in Quercus. Mol Phylogenet Evol 19: 167-176.
-
(2001)
Mol Phylogenet Evol
, vol.19
, pp. 167-176
-
-
Mayol, M.1
Rosselló, J.A.2
-
35
-
-
84980072510
-
The taxonomy and origins of the cultivated bananas
-
Simmonds NW, Shepherd K, (1955) The taxonomy and origins of the cultivated bananas. Bot J Linn Soc 55: 302-312.
-
(1955)
Bot J Linn Soc
, vol.55
, pp. 302-312
-
-
Simmonds, N.W.1
Shepherd, K.2
-
36
-
-
0002254584
-
Classification of the bananas II. The genus Musa L
-
Cheesman EE, (1947) Classification of the bananas II. The genus Musa L. Kew Bull 2: 106-117.
-
(1947)
Kew Bull
, vol.2
, pp. 106-117
-
-
Cheesman, E.E.1
-
37
-
-
0000763669
-
Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa
-
Gawel NJ, Jarret RL, Whittemore AP, (1992) Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa. Theor Appl Genet 84: 286-290.
-
(1992)
Theor Appl Genet
, vol.84
, pp. 286-290
-
-
Gawel, N.J.1
Jarret, R.L.2
Whittemore, A.P.3
-
38
-
-
84966154038
-
Variation of ribosomal gene spacer length among wild and cultivated banana
-
Lanaud C, Tezenas du Montcel H, Jolivot MP, Glaszmann JC, González de León D, (1992) Variation of ribosomal gene spacer length among wild and cultivated banana. Heredity 68: 147-156.
-
(1992)
Heredity
, vol.68
, pp. 147-156
-
-
Lanaud, C.1
Tezenas du Montcel, H.2
Jolivot, M.P.3
Glaszmann, J.C.4
González de León, D.5
-
39
-
-
0036326774
-
Assessment of the validity of the section in Musa (Musaceae) using AFLP
-
Wong C, Kiew R, Argent G, Set O, Lee SK, et al. (2002) Assessment of the validity of the section in Musa (Musaceae) using AFLP. Ann Bot 90: 231-238.
-
(2002)
Ann Bot
, vol.90
, pp. 231-238
-
-
Wong, C.1
Kiew, R.2
Argent, G.3
Set, O.4
Lee, S.K.5
-
40
-
-
0036929337
-
Analysis of genetic diversity and sectional relationships in Musa using AFLP markers
-
Ude G, Pillay M, Ogundiwin E, Tenkouano A, (2002) Analysis of genetic diversity and sectional relationships in Musa using AFLP markers. Theor Appl Genet 104: 1239-1245.
-
(2002)
Theor Appl Genet
, vol.104
, pp. 1239-1245
-
-
Ude, G.1
Pillay, M.2
Ogundiwin, E.3
Tenkouano, A.4
-
41
-
-
70349693908
-
Development and assesment of Diversity Array technology for high-throughput DNA analysis in Musa
-
Risterucci AM, Hippolyte I, Perrier X, Xia L, Caig V, et al. (2009) Development and assesment of Diversity Array technology for high-throughput DNA analysis in Musa. Theor Appl Genet 119: 1093-1103.
-
(2009)
Theor Appl Genet
, vol.119
, pp. 1093-1103
-
-
Risterucci, A.M.1
Hippolyte, I.2
Perrier, X.3
Xia, L.4
Caig, V.5
-
42
-
-
16344368904
-
Nuclear genome size and genomic distribution of ribosomal DNA in Musa and Ensete (Musaceae): taxonomic implications
-
Bartoš J, Alkhimova O, Doleželová M, De Langhe E, Doležel J, (2005) Nuclear genome size and genomic distribution of ribosomal DNA in Musa and Ensete (Musaceae): taxonomic implications. Cytogenet Genome Res 109: 50-57.
-
(2005)
Cytogenet Genome Res
, vol.109
, pp. 50-57
-
-
Bartoš, J.1
Alkhimova, O.2
Doleželová, M.3
de Langhe, E.4
Doležel, J.5
-
43
-
-
33746076969
-
Musa voonii, a new Musa species from northern Borneo and discussion of the section Callimusa in Borneo
-
Hakkinen M, (2004) Musa voonii, a new Musa species from northern Borneo and discussion of the section Callimusa in Borneo. Acta Phytotaxon Geobot 55: 79-88.
-
(2004)
Acta Phytotaxon Geobot
, vol.55
, pp. 79-88
-
-
Hakkinen, M.1
-
44
-
-
33746073952
-
Musa azizii, a new Musa species (Musaceae) from northern Borneo
-
Hakkinen M, (2005) Musa azizii, a new Musa species (Musaceae) from northern Borneo. Acta Phytotaxon Geobot 56: 27-31.
-
(2005)
Acta Phytotaxon Geobot
, vol.56
, pp. 27-31
-
-
Hakkinen, M.1
-
45
-
-
66649124176
-
Genetic diversity of carotenoid-rich bananas evaluated by Diversity Arrays Technology
-
Amorim EP, Vilarinhos AD, Cohen KO, Amorim VBO, dos Santos-Serejo JA, et al. (2009) Genetic diversity of carotenoid-rich bananas evaluated by Diversity Arrays Technology. Genet Mol Biol 32: 96-103.
-
(2009)
Genet Mol Biol
, vol.32
, pp. 96-103
-
-
Amorim, E.P.1
Vilarinhos, A.D.2
Cohen, K.O.3
Amorim, V.B.O.4
dos Santos-Serejo, J.A.5
-
46
-
-
20144362700
-
Isolation and characterization of microsatellite markers from Musa balbisiana
-
Buhariwalla HK, Jarret RL, Jayashree B, Crouch JH, Ortiz R, (2005) Isolation and characterization of microsatellite markers from Musa balbisiana. Mol Ecol Notes 5: 327-330.
-
(2005)
Mol Ecol Notes
, vol.5
, pp. 327-330
-
-
Buhariwalla, H.K.1
Jarret, R.L.2
Jayashree, B.3
Crouch, J.H.4
Ortiz, R.5
-
47
-
-
34447094769
-
Genetic diversity of wild banana (Musa balbisiana Colla) in China as revealed by AFLP markers
-
Wang XL, Chiang TY, Roux N, Hao G, Ge XJ, (2007) Genetic diversity of wild banana (Musa balbisiana Colla) in China as revealed by AFLP markers. Genet Resour Crop Evol 54: 1125-1132.
-
(2007)
Genet Resour Crop Evol
, vol.54
, pp. 1125-1132
-
-
Wang, X.L.1
Chiang, T.Y.2
Roux, N.3
Hao, G.4
Ge, X.J.5
-
48
-
-
0346640580
-
PCR-RFLP of the ribosomal DNA internal transcribed spacer (ITS) provides markers for the A and B genomes in Musa L
-
Nwakanma DC, Pillay M, Okoli BE, Tenkouano A, (2003) PCR-RFLP of the ribosomal DNA internal transcribed spacer (ITS) provides markers for the A and B genomes in Musa L. Theor Appl Genet 108: 154-159.
-
(2003)
Theor Appl Genet
, vol.108
, pp. 154-159
-
-
Nwakanma, D.C.1
Pillay, M.2
Okoli, B.E.3
Tenkouano, A.4
-
49
-
-
77956263812
-
Molecular phylogeny and systematics of the banana family (Musaceae) inferred from multiple nuclear and chloroplast DNA fragments, with a special reference to the genus Musa
-
Li L-F, Hakkinen M, Yuan Y-M, Hao G, Ge X-J, (2010) Molecular phylogeny and systematics of the banana family (Musaceae) inferred from multiple nuclear and chloroplast DNA fragments, with a special reference to the genus Musa. Mol Phylogenet Evol 57: 1-10.
-
(2010)
Mol Phylogenet Evol
, vol.57
, pp. 1-10
-
-
Li, L.-F.1
Hakkinen, M.2
Yuan, Y.-M.3
Hao, G.4
Ge, X.-J.5
-
50
-
-
77149138008
-
Phylogenetic analyses of the banana family (Musaceae) based on nuclear ribosomal (ITS) and chloroplast (trnL-F) evidence
-
Liu A-Z, Kress J, Li D-Z, (2010) Phylogenetic analyses of the banana family (Musaceae) based on nuclear ribosomal (ITS) and chloroplast (trnL-F) evidence. Taxon 59: 20-28.
-
(2010)
Taxon
, vol.59
, pp. 20-28
-
-
Liu, A.-Z.1
Kress, J.2
Li, D.-Z.3
-
51
-
-
79955079429
-
A multi-gene sequence based phylogeny of the Musaceae (banana) family
-
Christelová P, Valárik M, Høibová E, De Langhe E, Doležel J, (2011) A multi-gene sequence based phylogeny of the Musaceae (banana) family. BMC Evol Biol (submitted).
-
(2011)
BMC Evol Biol (Submitted)
-
-
Christelová, P.1
Valárik, M.2
Høibová, E.3
de Langhe, E.4
Doležel, J.5
-
52
-
-
0345149784
-
Characterization of angiosperm nrDNA polymorphism, paralogy and pseudogenes
-
Bailey CD, Carr TG, Harris SA, Hughes CE, (2003) Characterization of angiosperm nrDNA polymorphism, paralogy and pseudogenes. Mol Phylogenet Evol 29: 435-455.
-
(2003)
Mol Phylogenet Evol
, vol.29
, pp. 435-455
-
-
Bailey, C.D.1
Carr, T.G.2
Harris, S.A.3
Hughes, C.E.4
-
53
-
-
50449109352
-
Allopolyploid speciation in Persicaria (Polygonaceae): insights from a low-copy nuclear region
-
Kim ST, Sultan SE, Donoghue MJ, (2008) Allopolyploid speciation in Persicaria (Polygonaceae): insights from a low-copy nuclear region. Proc Natl Acad Sci U S A 105: 12370-12375.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 12370-12375
-
-
Kim, S.T.1
Sultan, S.E.2
Donoghue, M.J.3
-
54
-
-
12744272176
-
Evolution by reticulation: European dogroses originated by multiple hybridization across the genus Rosa
-
Ritz CM, Schmuths H, Wissemann V, (2005) Evolution by reticulation: European dogroses originated by multiple hybridization across the genus Rosa. J Hered 96: 4-14.
-
(2005)
J Hered
, vol.96
, pp. 4-14
-
-
Ritz, C.M.1
Schmuths, H.2
Wissemann, V.3
-
55
-
-
78649571043
-
Did backcrossing contribute to the origine of hybrid edible bananas?
-
De Langhe E, Høibová E, Carpentier S, Doležel J, Swennen R, (2010) Did backcrossing contribute to the origine of hybrid edible bananas? Ann Bot 106: 849-857.
-
(2010)
Ann Bot
, vol.106
, pp. 849-857
-
-
De Langhe, E.1
Høibová, E.2
Carpentier, S.3
Doležel, J.4
Swennen, R.5
-
56
-
-
0036918660
-
Molecular evidence for allopolyploid origin of the Rosa canina complex (Rosaceae, Rosoideae)
-
Wissemann V, (2002) Molecular evidence for allopolyploid origin of the Rosa canina complex (Rosaceae, Rosoideae). J Appl Bot 76: 176-178.
-
(2002)
J Appl Bot
, vol.76
, pp. 176-178
-
-
Wissemann, V.1
-
57
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 473: 376-380.
-
(2005)
Nature
, vol.473
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
-
59
-
-
0002338429
-
Observation on Musa taxonomy
-
Workshop held at Los Banos, Philippines 5-10 September. INIBAP, Montpellier, France
-
Shepherd K, (1988) Observation on Musa taxonomy. pp. 158-165 In: Identification of Genetic Diversity in the Genus Musa. Proc. Int. Workshop held at Los Banos, Philippines 5-10 September. INIBAP, Montpellier, France.
-
(1988)
Identification of Genetic Diversity in the Genus Musa. Proc. Int.
, pp. 158-165
-
-
Shepherd, K.1
-
60
-
-
0001756602
-
Notes on banana taxonomy
-
Simmond NW, (1960) Notes on banana taxonomy. Kew Bull 14: 198-212.
-
(1960)
Kew Bull
, vol.14
, pp. 198-212
-
-
Simmond, N.W.1
-
61
-
-
0031845613
-
ITS sequences from nuclear rDNA suggest phylogenetic relationships between Euro-Mediterranean, East Asiatic and North American Quercus (Fagaceae)
-
Samuel R, Bachmair A, Jobst J, Ehrendorfer F, (1998) ITS sequences from nuclear rDNA suggest phylogenetic relationships between Euro-Mediterranean, East Asiatic and North American Quercus (Fagaceae). Plant Syst Evol 211: 129-139.
-
(1998)
Plant Syst Evol
, vol.211
, pp. 129-139
-
-
Samuel, R.1
Bachmair, A.2
Jobst, J.3
Ehrendorfer, F.4
-
62
-
-
0033174343
-
Phylogeny, biogeography and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae)
-
Manos P, Doyle JJ, Nixon KC, (1999) Phylogeny, biogeography and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae). Mol Phylogenet Evol 12: 333-349.
-
(1999)
Mol Phylogenet Evol
, vol.12
, pp. 333-349
-
-
Manos, P.1
Doyle, J.J.2
Nixon, K.C.3
-
63
-
-
0030158571
-
The Staden sequence analysis package
-
Staden R, (1996) The Staden sequence analysis package. Mol Biotechnol 5: 233-241.
-
(1996)
Mol Biotechnol
, vol.5
, pp. 233-241
-
-
Staden, R.1
-
64
-
-
0029141926
-
Preparation of megabase-size DNA from plant nuclei
-
Zhang HB, Zhao X, Ding X, Paterson AH, Wing RA, (1995) Preparation of megabase-size DNA from plant nuclei. Plant J 7: 175-184.
-
(1995)
Plant J
, vol.7
, pp. 175-184
-
-
Zhang, H.B.1
Zhao, X.2
Ding, X.3
Paterson, A.H.4
Wing, R.A.5
-
65
-
-
20144369090
-
Creation of a BAC resource to study the structure and evolution of the banana (Musa balbisiana) genome
-
Šafář J, Noa-Carrazana JC, Vrána J, Bartoš J, Alkhimova O, et al. (2004) Creation of a BAC resource to study the structure and evolution of the banana (Musa balbisiana) genome. Genome 47: 1182-1191.
-
(2004)
Genome
, vol.47
, pp. 1182-1191
-
-
Šafář, J.1
Noa-Carrazana, J.C.2
Vrána, J.3
Bartoš, J.4
Alkhimova, O.5
-
66
-
-
38349172944
-
From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing
-
doi:10.1093/nar/gkm1095
-
Meyer M, Briggs AW, Maricic T, Hober B, Hoffner B, et al. (2008) From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing. Nucl Acids Res 36: e5 doi:10.1093/nar/gkm1095.
-
(2008)
Nucl Acids Res
, vol.36
-
-
Meyer, M.1
Briggs, A.W.2
Maricic, T.3
Hober, B.4
Hoffner, B.5
-
67
-
-
24944555175
-
RepeatMasker Open-3.0
-
Available
-
Smit AFA, Hubley R, Green P, (1996-2004) RepeatMasker Open-3.0. Available:http://www.repeatmasker.org.
-
(1996)
-
-
Smit, A.F.A.1
Hubley, R.2
Green, P.3
-
68
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huan X, Madan A, (1999) CAP3: A DNA sequence assembly program. Genome Res 9: 868-877.
-
(1999)
Genome Res
, vol.9
, pp. 868-877
-
-
Huan, X.1
Madan, A.2
-
69
-
-
38349101340
-
Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula
-
Available:. Accessed 2010 Sep 10
-
Macas J, Neumann P, Navrátilová A, (2007) Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula. BMC Genomics 8: 427 Available:http://www.biomedcentral.com/1471-2164/8/427. Accessed 2010 Sep 10.
-
(2007)
BMC Genomics
, vol.8
, pp. 427
-
-
Macas, J.1
Neumann, P.2
Navrátilová, A.3
-
70
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
71
-
-
0030464460
-
SeaView and Phylo_win, two graphic tools for sequence alignment and molecular phylogeny
-
Galtier N, Gouy M, Gautier C, (1996) SeaView and Phylo_win, two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12: 543-548.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 543-548
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
72
-
-
0028294049
-
MEGA, Molecular Evolutionary Genetics Analysis software for microcomputers
-
Kumar S, Tamura K, Nei M, (1994) MEGA, Molecular Evolutionary Genetics Analysis software for microcomputers. Bioinformatics 10: 189-191.
-
(1994)
Bioinformatics
, vol.10
, pp. 189-191
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
73
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews DH, Sabina J, Zuker M, Turner DH, (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol 288: 911-940.
-
(1999)
J Mol Biol
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
74
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M, (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
75
-
-
0000464521
-
Phylogeny of the Scitamineae: Morphological and anatomical considerations
-
Tomlinson PB, (1962) Phylogeny of the Scitamineae: Morphological and anatomical considerations. Evolution 16: 192-213.
-
(1962)
Evolution
, vol.16
, pp. 192-213
-
-
Tomlinson, P.B.1
-
76
-
-
0035527397
-
Unraveling the evolution of the families of the Zingiberales using morphological and molecular evidence
-
Kress WJ, Prince LM, Hahn WJ, Zimmer EA, (2001) Unraveling the evolution of the families of the Zingiberales using morphological and molecular evidence. Syst Biol 50: 926-944.
-
(2001)
Syst Biol
, vol.50
, pp. 926-944
-
-
Kress, W.J.1
Prince, L.M.2
Hahn, W.J.3
Zimmer, E.A.4
-
77
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D, (2006) Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23: 254-267.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
78
-
-
45849154165
-
jModelTest: Phylogenetic model averaging
-
Posada D, (2008) jModelTest: Phylogenetic model averaging. Mol Biol Evol 25: 1253-1256.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
79
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
80
-
-
0016355478
-
A new look at the statistical model identification
-
Akaike H, (1974) A new look at the statistical model identification. IEEE Trans Autom Control 19: 716-723.
-
(1974)
IEEE Trans Autom Control
, vol.19
, pp. 716-723
-
-
Akaike, H.1
-
81
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Available:. Accessed 2010 Sep 10
-
Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214 Available:http://www.biomedcentral.com/1471-2148/7/214. Accessed 2010 Sep 10.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
82
-
-
0035162598
-
The European large subunit ribosomal RNA database
-
Wuyts J, De Rijk P, Van de Peer Y, Winkelmans T, De Wachter R, (2001) The European large subunit ribosomal RNA database. Nucleic Acids Res 29: 175-177.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 175-177
-
-
Wuyts, J.1
de Rijk, P.2
van de Peer, Y.3
Winkelmans, T.4
de Wachter, R.5
-
83
-
-
70349565077
-
Combining biological approaches to shed light on the evolution of edible bananas
-
Perrier X, Bakry F, Carreel F, Jenny C, Horry J-P, et al. (2009) Combining biological approaches to shed light on the evolution of edible bananas. Ethnobotany Research & Applications 7: 199-216.
-
(2009)
Ethnobotany Research & Applications
, vol.7
, pp. 199-216
-
-
Perrier, X.1
Bakry, F.2
Carreel, F.3
Jenny, C.4
Horry, J.-P.5
|