Evolution by reticulation: European dogroses originated by multiple hybridization across the genus Rosa

Journal of Heredity

Volumn 96, Issue 1, 2005, Pages 4-14

  Ritz, C M ^a   Schmuths, H ^b   Wissemann, V ^a  

^a FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

^b IPK Gatersleben ^*  (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER 1; RIBOSOME DNA;

ARTICLE; DNA DETERMINATION; DNA STRUCTURE; EUROPE; EVOLUTION; HAPLOIDY; HYBRIDIZATION; MEIOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PENTAPLOIDY; POLLEN; PRIORITY JOURNAL; PSEUDOGENE; ROSE; TETRAPLOIDY; UNINDEXED SEQUENCE;

CONSENSUS SEQUENCE; DNA, PLANT; EVOLUTION; GENOME, PLANT; HAPLOIDY; HYBRIDIZATION, GENETIC; MEIOSIS; MOLECULAR SEQUENCE DATA; POLYPLOIDY; ROSA; SEQUENCE ANALYSIS, DNA;

CANIDAE; ROSA;

EID: 12744272176     PISSN: 00221503     EISSN: None     Source Type: Journal    
DOI: 10.1093/jhered/esi011     Document Type: Article

References (49)

1. Aguilar JF, Rossello JA, and Feliner GN, 1999. Nuclear ribosomal DNA (nrDNA) concerted evolution in natural and artificial hybrids of Armeria (Plumbaginaceae). Mol Ecol 8:1341-1346.
2. Ainouche ML and Bayer RJ, 1997. On the origins of the tetraploid Bromus species (section Bromus, Poaceae): insights from internal transcribed spacer sequences of nuclear ribosomal DNA. Genome 40:730-743.
3. Alvarez I and Wendel JF, 2003. Ribosomal ITS sequences and plant phylogenetic inference. Mol Phylogenet Evol 29:417-434.
4. Bailey CD, Carr TG, Harris SA, and Hughes CE, 2003. Characterization of angiosperm nrDNA polymorphism, paralogy, and pseudogenes. Mol Phylogenet Evol 29:435-455.
5. Baldwin BG, Sanderson MJ, Porter MJ, Wojciechowski MF, Campbell CS, and Donoghue MJ, 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann Missouri Bot Gard 82:247-277.
6. Blackburn K and Harrison JHW, 1921. The status of the British rose forms as determined by their cytological behaviour. Ann Bot 35:159-188.
7. Buckler ES and Holtsford TP, 1996. Zea ribosomal repeat evolution and substitution patterns. Mol Biol Evol 13:623-632.
8. Buckler ES, Ippolito A, and Holtsford TP, 1997. The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications. Genetics 145:821-832.
9. Campbell CS, Wojciechowski MF, Baldwin BG, Alice LA, and Donoghue MJ, 1997. Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic complex (Rosaceae). Mol Biol Evol 14:81-90.
10. Clement M, Posada D, and Crandall KA, 2000. TCS: a computer program to estimate gene genealogies. Mol Ecol 9:1657-1659.
11. Denduangboripant J and Cronk QCB, 2001. Evolution and alignment of the hypervariable arm 1 of Aeschynanthus (Gesneriaceae) ITS2 nuclear ribosomal DNA. Mol Phylogenet Evol 20:163-172.
12. Gottschling M, Hilger HH, Wolf M, and Diane N, 2001. Secondary structure of the ITS1 transcript and its application in a reconstruction of the phylogeny of Boraginales. Plant Biol 3:629-636.
13. Grant V, 1971. Plant speciation. New York: Columbia University Press.
14. Gustafsson A, 1944. The constitution of the Rosa canina complex. Hereditas 30:405-428.
15. Gustafsson A and Hakansson A, 1942. Meiose in some Rosa-hybrids. Bot Not 331-343.
16. Henker H and Schulze G, 1993. Die Wildrosen des norddeutschen Tieflandes. Gleditschia 21:3-22.
17. Hofacker I, Fekete M, and Stadler PF, 2002. Secondary structure prediction for aligned RNA sequences. J Mol Biol 319:1059-1066.
18. Hurst CC, 1925. Chromosomes and characters in Rosa and their significance in the origin of species. In: Experiments in genetics, vol. 46. Cambridge: Cambridge University Press.
19. Hurst CC, 1928. Differential polyploidy in the genus Rosa L. Z. Indukt Abstammungs-Vererbungsl Supplement 2 46:46-47.
20. Klásterškỳ I, 1969. Die Problematik des Rosa canina L.-Komplexes in der Tschechoslowakei. Mitt Bot Linz 6.1 (1974).
21. Liu JS and Schardl CL, 1994. A conserved sequence in internal transcribed spacer-1 of plant nuclear ribosomal-RNA genes. Plant Mol Biol 26:775-778.
22. Ma Y, IslamFaridi MN, Crane CF, Ji Y, Stelly DM, Price HJ, and Byrne DH, 1997. In situ hybridization of ribosomal DNA to rose chromosomes. J Hered 88:158-161.
23. Matsumoto S, Kouchi M, Yabuki J, Kusunoki M, Ueda Y, and Fukui H, 1998. Phylogenetic analyses of the genus Rosa using the matK sequence: molecular evidence for the narrow genetic background of modern roses. Scientia Horticulturae 77:73-82.
24. Matsumoto S, Kouchi M, Fukui H, and Ueda Y, 2000. Phylogenetic analyses of the subgenus Eurosa using the ITS nrDNA sequence. Acta Hort. (ISHS) 521:193-202.
25. Mayol M and Rossello JA, 2001. Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus. Mol Phylogenet Evol 19:167-176.
26. Ochsmann J, 2000. Morphologische und molekularsystematische Untersuchungen an der Centaurea stoebe L.-Gruppe (Asteraceae-Cardueae) in Europa. Dissertationes Botanicae, 324, Berlin, Stuttgart: Cramer.
27. Rehder A, 1949. Bibliography of cultivated trees and shrubs hardy in the cooler temperate regions of the northern hemisphere. In: Koeltz, S. (ed.), Collectanea bibliographica, vol. 10, 296-317. Jamaica Plain. Mass.: Arnold Arboretum. Reprint 1978 by O. Koeltz Koenigstein.
28. Ritland CE, Ritland K, and Straus NA, 1993. Variation in the ribosomal internal transcribed spacers (ITS1 and ITS2) among 8 taxa of the Mimulusguttatus species complex. Mol Biol Evol 10:1273-1288.
29. Ritz CM and Wissemann V, 2003. Male correlated non-matroclinal character inheritance in reciprocal hybrids of Rosa section Caninae (DC) Ser. (Rosaceae). Plant Syst Evol 241:213-221.
30. Sang T, Crawford DJ, and Stuessy TF, 1995. Documentation of reticulate evolution in peonies (Peonia) using internal transcribed spacer sequences of nuclear ribosomal DNA-implications for biogeography and concerted evolution. Proc Natl Acad Sci USA 92:6813-6817.
31. SantaLucia J, 1998. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc Natl Acad Sci USA 95:1460-1465.
32. Schlotterer C and Tautz D, 1994. Chromosomal homogeneity of Drosophila ribosomal DNA arrays suggests intrachromosomal exchanges drive concerted evolution. Curr Biol 4:777-783.
33. Soltis PS and Soltis DE, 1991. Multiple origins of the allotetraploid Tragopogon mirus (Compositae)-rDNA evidence. Syst Bot 16:407-413.
34. Soltis PS, Plunkett GM, Novak SJ, and Solus DE, 1995. Genetic variation in Tragopogon species-additional origins of the allotetraploids T. mirus and T. miscellus (Compositae). Am J Bot 82:1329-1341.
35. Suh Y, Thien LB, Reeve HA, and Zimmer EA, 1993. Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in Winteraceae. Am J Bot 80:1042-1055.
36. Täckholm G, 1920. On the cytology of the genus Rosa. A preliminary note. Svensk Botanisk Tidskrift 14:300-311.
37. Täckholm G, 1922. Zytologische Studien über die Gattung Rosa. Acta Horti Bergiani 7:97-381.
38. Templeton AR, Crandall KA, and Sing CF, 1992. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132:619-632.
39. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, and Higgins DG, 1997. The ClustaIX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882.
40. Vargas P, McAllister HA, Morton C, Jury SL, and Wilkinson MJ, 1999. Polyploid speciation in Hedera (Araliaceae): phylogenetic and biogeographic insights based on chromosome counts and ITS sequences. Plant Syst Evol 219:165-179.
41. Volkov RA, Borisjuk NV, Panchuk II, Schweizer D, and Hemleben V, 1999. Elimination and rearrangement of parental rDNA in the allotetraploid Nicotiana tabacum. Mol Biol Evol 16:311-320.
42. Volkov RA, Medina FJ, Zentgraf U, and Hemleben V, 2004. Molecular cell biology: organization and molecular evolution of rDNA, nucleolar dominance, and nucleolar structure. Prog Botany 65:106-146.
43. White TJ, Lee S, and JT, 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols. A guide to methods and applications (Innis MA, Gelfand DH, Sninsky JJ, and White JW, eds). New York: Academic Press; 315-322.
44. Wissemann V, 2000. Molekulargenetische und morphologisch-anatomische Untersuchungen zur Evolution und Genomzusammensetzung von Wildrosen der Sektion Caninae (DC.) Ser. Botanische Jahrbücher für Systematik, Pflanzengeschichte und Pflanzengeographie 122:357-429.
45. Wissemann V and Hellwig FH, 1997. Reproduction and hybridisation in the genus Rosa section Caninae (Ser.). Rehd Botanica Acta 110:251-256.
46. Wissemann V, 2003a. Conventional taxonomy of wild roses. In: Encyclopedia of rose science (Roberts A, Debener T, and Gudin S, eds). London: Academic Press; 111-117.
47. Wissemann V, 2003b. Hybridization and the evolution of the nrITS spacer region. In: Plant genome: biodiversity and evolution, vol. 1 part A (Sharma AK and Sharma A eds). Enfield: Science Publishers.
48. Wu S, Ueda Y, He HY, Nishihara S, and Matsumoto S, 2000. Phylogenetic analysis of Japanese Rosa species using matK sequences. Breeding Sci 50:275-281.
49. Wu S, Ueda Y, Nishihara S, and Matsumoto S, 2001. Phylogenetic analysis of Japanese Rosa species using DNA sequences of nuclear ribosomal internal transcribed spacers (ITS). J Hort Sci Biotechnol 76:127-132.