-
1
-
-
3543063591
-
Phylogeny of Cerberus (Serpentes: Homalopsinae) and phylogeography of Cerberus rynchops: diversification of a coastal marine snake in Southeast Asia
-
Alfaro M.E., Karns D.R., Voris H.K., Abernathy E., Sellins S.L. Phylogeny of Cerberus (Serpentes: Homalopsinae) and phylogeography of Cerberus rynchops: diversification of a coastal marine snake in Southeast Asia. J. Biogeogr. 2004, 31:1277-1292.
-
(2004)
J. Biogeogr.
, vol.31
, pp. 1277-1292
-
-
Alfaro, M.E.1
Karns, D.R.2
Voris, H.K.3
Abernathy, E.4
Sellins, S.L.5
-
2
-
-
0036909632
-
Estimating divergence times from molecular data on phylogenetic and population genetic timescales
-
Arbogast B.S., Edwards S.V., Wakeley J., Beerli P., Slowinski J. Estimating divergence times from molecular data on phylogenetic and population genetic timescales. Annu. Rev. Ecol. Syst. 2002, 33:707-740.
-
(2002)
Annu. Rev. Ecol. Syst.
, vol.33
, pp. 707-740
-
-
Arbogast, B.S.1
Edwards, S.V.2
Wakeley, J.3
Beerli, P.4
Slowinski, J.5
-
3
-
-
33847041452
-
Cryptic species as a window on diversity and conservation
-
Bickford D., Lohman D.J., Sodhi N.S., Ng P.K.L., Meier R., Winker K., Ingram K.K., Das I. Cryptic species as a window on diversity and conservation. Trends Ecol. Evol. 2007, 22:148-155.
-
(2007)
Trends Ecol. Evol.
, vol.22
, pp. 148-155
-
-
Bickford, D.1
Lohman, D.J.2
Sodhi, N.S.3
Ng, P.K.L.4
Meier, R.5
Winker, K.6
Ingram, K.K.7
Das, I.8
-
4
-
-
9944255059
-
Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of Scincid lizards
-
Brandley M.C., Schmitz A., Reeder T.W. Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of Scincid lizards. Syst. Biol. 2005, 54:373-390.
-
(2005)
Syst. Biol.
, vol.54
, pp. 373-390
-
-
Brandley, M.C.1
Schmitz, A.2
Reeder, T.W.3
-
5
-
-
47749133826
-
Rates and patterns in the evolution of snake-like body form in squamate reptiles: evidence for repeated re-evolution of lost digits and long-term persistence of intermediate body forms
-
Brandley M.C., Huelsenbeck J.P., Wiens J.J. Rates and patterns in the evolution of snake-like body form in squamate reptiles: evidence for repeated re-evolution of lost digits and long-term persistence of intermediate body forms. Evolution 2008, 62:2042-2064.
-
(2008)
Evolution
, vol.62
, pp. 2042-2064
-
-
Brandley, M.C.1
Huelsenbeck, J.P.2
Wiens, J.J.3
-
6
-
-
0012545511
-
A revision of the genus Brachymeles (Scincidae), with descriptions of new species and subspecies
-
Brown W.C. A revision of the genus Brachymeles (Scincidae), with descriptions of new species and subspecies. Breviora 1956, 54:1-19.
-
(1956)
Breviora
, vol.54
, pp. 1-19
-
-
Brown, W.C.1
-
7
-
-
0001463964
-
The zoogeography of the Philippine Islands, a fringing archipelago
-
Brown W.C., Alcala A.C. The zoogeography of the Philippine Islands, a fringing archipelago. Proc. California Acad. Sci. 1970, 38:105-130.
-
(1970)
Proc. California Acad. Sci.
, vol.38
, pp. 105-130
-
-
Brown, W.C.1
Alcala, A.C.2
-
9
-
-
77649089842
-
A new species of Brachymeles (Reptilia: Scincidae) from Catanduanes Island, Philippines
-
Brown W.C., Alcala A.C. A new species of Brachymeles (Reptilia: Scincidae) from Catanduanes Island, Philippines. Proc. Biol. Soc. Wash. 1995, 108:392-394.
-
(1995)
Proc. Biol. Soc. Wash.
, vol.108
, pp. 392-394
-
-
Brown, W.C.1
Alcala, A.C.2
-
10
-
-
0012486957
-
Application of lineage-based species concepts to oceanic island frog populations: the effects of differing taxonomic philosophies on the estimation of Philippine biodiversity
-
Brown R.M., Diesmos A.C. Application of lineage-based species concepts to oceanic island frog populations: the effects of differing taxonomic philosophies on the estimation of Philippine biodiversity. Silliman J. 2002, 42:133-162.
-
(2002)
Silliman J.
, vol.42
, pp. 133-162
-
-
Brown, R.M.1
Diesmos, A.C.2
-
11
-
-
70349849206
-
Philippines, Biology
-
University of California Press, Berkeley, R. Gillespie, D. Clague (Eds.)
-
Brown R.M., Diesmos A.C. Philippines, Biology. Encyclopedia of Islands 2009, 723-732. University of California Press, Berkeley. R. Gillespie, D. Clague (Eds.).
-
(2009)
Encyclopedia of Islands
, pp. 723-732
-
-
Brown, R.M.1
Diesmos, A.C.2
-
12
-
-
0036657015
-
Phylogenetic systematics of the Rana signata complex of Philippine and Bornean stream frogs: reconsideration of Huxley's modification of Wallace's Line at the Oriental-Australian faunal zone interface
-
Brown R.M., Guttman S.I. Phylogenetic systematics of the Rana signata complex of Philippine and Bornean stream frogs: reconsideration of Huxley's modification of Wallace's Line at the Oriental-Australian faunal zone interface. Biol. J. Linn. Soc. 2002, 76:393-461.
-
(2002)
Biol. J. Linn. Soc.
, vol.76
, pp. 393-461
-
-
Brown, R.M.1
Guttman, S.I.2
-
13
-
-
77649172099
-
Review of the genus Brachymeles (Scincidae), with descriptions of new species and subspecies
-
Brown W.C., Rabor D.S. Review of the genus Brachymeles (Scincidae), with descriptions of new species and subspecies. Proc. California Acad. Sci. 1967, 15:525-548.
-
(1967)
Proc. California Acad. Sci.
, vol.15
, pp. 525-548
-
-
Brown, W.C.1
Rabor, D.S.2
-
14
-
-
0034096790
-
Status of some Philippine frogs related to Rana everetti (Anura: Ranidae), description of a new species, and resurrection of Rana igorota (Taylor 1922)
-
Brown R.M., McGuire J.A., Diesmos A.C. Status of some Philippine frogs related to Rana everetti (Anura: Ranidae), description of a new species, and resurrection of Rana igorota (Taylor 1922). Herpetologica 2000, 56:81-104.
-
(2000)
Herpetologica
, vol.56
, pp. 81-104
-
-
Brown, R.M.1
McGuire, J.A.2
Diesmos, A.C.3
-
15
-
-
77952695401
-
The Philippine frogs of the genus Leptobrachium (Anura; Megophryidae): phylogeny-based species delimitation, taxonomic revision, and descriptions of three new species
-
Brown R.M., Siler C.D., Diesmos A.C., Alcala A.C. The Philippine frogs of the genus Leptobrachium (Anura; Megophryidae): phylogeny-based species delimitation, taxonomic revision, and descriptions of three new species. Herpetol. Monogr. 2009, 23:1-44.
-
(2009)
Herpetol. Monogr.
, vol.23
, pp. 1-44
-
-
Brown, R.M.1
Siler, C.D.2
Diesmos, A.C.3
Alcala, A.C.4
-
16
-
-
77958165782
-
Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: evidence for recent human-mediated range expansion?
-
Brown R.M., Linkem C.W., Siler C.D., Sukumaran J., Esselstyn J.A., Diesmos A.C., Iskandar D.T., Bickford D., Evans B.J., McGuire J.A., Grismer L., Supriatna J., Andayani N. Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: evidence for recent human-mediated range expansion?. Mol. Phylogenet. Evol. 2010, 57:598-619.
-
(2010)
Mol. Phylogenet. Evol.
, vol.57
, pp. 598-619
-
-
Brown, R.M.1
Linkem, C.W.2
Siler, C.D.3
Sukumaran, J.4
Esselstyn, J.A.5
Diesmos, A.C.6
Iskandar, D.T.7
Bickford, D.8
Evans, B.J.9
McGuire, J.A.10
Grismer, L.11
Supriatna, J.12
Andayani, N.13
-
17
-
-
68049139241
-
A multilocus phylogeny of Malagasy scincid lizards elucidates the relationships of the fossorial genera Androngo and Cryptoscincus
-
Crottini A., Dordel J., Kohler J., Glaw F., Schmitz A., Vences M. A multilocus phylogeny of Malagasy scincid lizards elucidates the relationships of the fossorial genera Androngo and Cryptoscincus. Mol. Phylogenet. Evol. 2009, 53:345-350.
-
(2009)
Mol. Phylogenet. Evol.
, vol.53
, pp. 345-350
-
-
Crottini, A.1
Dordel, J.2
Kohler, J.3
Glaw, F.4
Schmitz, A.5
Vences, M.6
-
18
-
-
15944395807
-
Unraveling evolutionary lineages in the limbless fossorial skink genus Acontias (Sauria: Scincidae): are subspecies equivalent systematic units?
-
Daniels S.R., Heideman N.J.L., Hendricks M.G.J., Mokone M.E., Crandall K.A. Unraveling evolutionary lineages in the limbless fossorial skink genus Acontias (Sauria: Scincidae): are subspecies equivalent systematic units?. Mol. Phylogenet. Evol. 2005, 34:645-654.
-
(2005)
Mol. Phylogenet. Evol.
, vol.34
, pp. 645-654
-
-
Daniels, S.R.1
Heideman, N.J.L.2
Hendricks, M.G.J.3
Mokone, M.E.4
Crandall, K.A.5
-
19
-
-
0004139632
-
-
Bureau of Science, Manila, Philippines
-
Dickerson R.E., Merrill E.R., McGregor R.C., Schultze W., Taylor E.H., Herre A.W.C.T. Distribution of Life in the Philippines 1925, Bureau of Science, Manila, Philippines.
-
(1925)
Distribution of Life in the Philippines
-
-
Dickerson, R.E.1
Merrill, E.R.2
McGregor, R.C.3
Schultze, W.4
Taylor, E.H.5
Herre, A.W.C.T.6
-
20
-
-
78049377344
-
Status and distribution of alien invasive frogs in the Philippines
-
Diesmos A.C., Diesmos M.L., Brown R.M. Status and distribution of alien invasive frogs in the Philippines. J. Environ. Sci. Manage., Philippines 2006, 9:41-53.
-
(2006)
J. Environ. Sci. Manage., Philippines
, vol.9
, pp. 41-53
-
-
Diesmos, A.C.1
Diesmos, M.L.2
Brown, R.M.3
-
21
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
22
-
-
33344465800
-
Relaxed phylogenetics and dating with confidence
-
Drummond A.J., Ho S.Y.W., Phillips M.J., Rambaut A. Relaxed phylogenetics and dating with confidence. PLoS Biol. 2006, 4:88.
-
(2006)
PLoS Biol.
, vol.4
, pp. 88
-
-
Drummond, A.J.1
Ho, S.Y.W.2
Phillips, M.J.3
Rambaut, A.4
-
23
-
-
79952738970
-
-
Erṕetologie ǵeńeral ou histoire naturelle complete des reptiles, V.
-
Duméril, A.M.C., Bibron, G., 1839. Erṕetologie ǵeńeral ou histoire naturelle complete des reptiles, V.
-
(1839)
-
-
Duméril, A.M.C.1
Bibron, G.2
-
24
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl. Acids Res. 2004, 32:1792-1797.
-
(2004)
Nucl. Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
25
-
-
67949121764
-
The role of repreated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago
-
Esselstyn J.A., Brown R.M. The role of repreated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago. Mol. Phylogenet. Evol. 2009, 58:171-181.
-
(2009)
Mol. Phylogenet. Evol.
, vol.58
, pp. 171-181
-
-
Esselstyn, J.A.1
Brown, R.M.2
-
26
-
-
11344289642
-
The mammals of Palawan Island, Philippines
-
Esselstyn J.A., Widmann P., Heaney L.R. The mammals of Palawan Island, Philippines. Proc. Biol. Soc. Wash. 2004, 117:271-302.
-
(2004)
Proc. Biol. Soc. Wash.
, vol.117
, pp. 271-302
-
-
Esselstyn, J.A.1
Widmann, P.2
Heaney, L.R.3
-
27
-
-
51349112488
-
A new species of Desmalopex (Pteropodidae) from the Philippines, with a phylogenetic analysis of the Pteropodini
-
Esselstyn J.A., Garcia H.J.D., Saulog M.G., Heaney L.R. A new species of Desmalopex (Pteropodidae) from the Philippines, with a phylogenetic analysis of the Pteropodini. J. Mammal. 2008, 89:815-825.
-
(2008)
J. Mammal.
, vol.89
, pp. 815-825
-
-
Esselstyn, J.A.1
Garcia, H.J.D.2
Saulog, M.G.3
Heaney, L.R.4
-
28
-
-
67949099298
-
Do geological or climatic processes drive speciation in dynamic archipelagos? The tempo and mode of diversification in Southeast Asian shrews
-
Esselstyn J.A., Timm R.M., Brown R.M. Do geological or climatic processes drive speciation in dynamic archipelagos? The tempo and mode of diversification in Southeast Asian shrews. Evolution 2009, 63:2595-2610.
-
(2009)
Evolution
, vol.63
, pp. 2595-2610
-
-
Esselstyn, J.A.1
Timm, R.M.2
Brown, R.M.3
-
29
-
-
1642446520
-
Phylogenetics of fanged frogs: testing biogeographical hypotheses at the interface of the Asian and Australian faunal zones
-
Evans B.J., Brown R.M., McGuire J.A., Supriatna J., Andayani N., Diesmos A., Iskandar D., Melnick D.J., Cannatella D.C. Phylogenetics of fanged frogs: testing biogeographical hypotheses at the interface of the Asian and Australian faunal zones. Syst. Biol. 2003, 52:794-819.
-
(2003)
Syst. Biol.
, vol.52
, pp. 794-819
-
-
Evans, B.J.1
Brown, R.M.2
McGuire, J.A.3
Supriatna, J.4
Andayani, N.5
Diesmos, A.6
Iskandar, D.7
Melnick, D.J.8
Cannatella, D.C.9
-
31
-
-
31844435709
-
Early evolution of the venom system in lizards and snakes
-
Fry B.G., Vidal N., Norman J.A., Vonk F.J., Scheib H., Ryan Ramjan S.F., Kuruppu S., Fung K., Hedges S.B., Richardson M.K., Hodgson W.C., Ignjatovic V., Summerhayes R., Kochva E. Early evolution of the venom system in lizards and snakes. Nature (Letters) 2006, 439:584-588.
-
(2006)
Nature (Letters)
, vol.439
, pp. 584-588
-
-
Fry, B.G.1
Vidal, N.2
Norman, J.A.3
Vonk, F.J.4
Scheib, H.5
Ryan Ramjan, S.F.6
Kuruppu, S.7
Fung, K.8
Hedges, S.B.9
Richardson, M.K.10
Hodgson, W.C.11
Ignjatovic, V.12
Summerhayes, R.13
Kochva, E.14
-
32
-
-
0001301797
-
Limb reduction in squamates: identification of the lineages and discussion of the trends
-
Greer A.E. Limb reduction in squamates: identification of the lineages and discussion of the trends. J. Herpetol. 1991, 25:166-173.
-
(1991)
J. Herpetol.
, vol.25
, pp. 166-173
-
-
Greer, A.E.1
-
33
-
-
0242578620
-
A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood
-
Guindon S., Gascuel O. A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Syst. Biol. 2003, 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
34
-
-
0022240369
-
Zoogeographic evidence for middle and late Pleistocene land bridges to the Philippine Islands
-
Heaney L.R. Zoogeographic evidence for middle and late Pleistocene land bridges to the Philippine Islands. Mod. Quat. Res. SE Asia 1985, 9:127-143.
-
(1985)
Mod. Quat. Res. SE Asia
, vol.9
, pp. 127-143
-
-
Heaney, L.R.1
-
35
-
-
0001411901
-
A synopsis of the mammalian fauna of the Philippine Islands
-
Heaney L.R., Balete D.S., Dolar M.L., Alcala A.C., Dans A.T.L., Gonzales P.C., Ingle N.R., Lepiten M.V., Oliver W.L.R., Ong P.S., Rickart E.A., Tabaranza B.R., Utzurrum R.B. A synopsis of the mammalian fauna of the Philippine Islands. Fieldiana: Zool. n.s. 1998, 88:1-61.
-
(1998)
Fieldiana: Zool. n.s.
, vol.88
, pp. 1-61
-
-
Heaney, L.R.1
Balete, D.S.2
Dolar, M.L.3
Alcala, A.C.4
Dans, A.T.L.5
Gonzales, P.C.6
Ingle, N.R.7
Lepiten, M.V.8
Oliver, W.L.R.9
Ong, P.S.10
Rickart, E.A.11
Tabaranza, B.R.12
Utzurrum, R.B.13
-
36
-
-
0012489079
-
A new limbless skink (Reptilia: Scincidae) from Thailand with comments on the generic status of the limbless skinks of Southeast Asia
-
Heyer W.R. A new limbless skink (Reptilia: Scincidae) from Thailand with comments on the generic status of the limbless skinks of Southeast Asia. Fieldiana: Zool. 1972, 58:109-129.
-
(1972)
Fieldiana: Zool.
, vol.58
, pp. 109-129
-
-
Heyer, W.R.1
-
37
-
-
0012489673
-
A new limbless Brachymeles (Sauria: Scincidae) from Mt. Kinabalu, North Borneo
-
Hikida T. A new limbless Brachymeles (Sauria: Scincidae) from Mt. Kinabalu, North Borneo. Copeia 1982, 4:840-844.
-
(1982)
Copeia
, vol.4
, pp. 840-844
-
-
Hikida, T.1
-
38
-
-
0001017281
-
Systematics and zoogeography of Philippine Amphibia
-
Inger R.F. Systematics and zoogeography of Philippine Amphibia. Fieldiana 1954, 33:181-531.
-
(1954)
Fieldiana
, vol.33
, pp. 181-531
-
-
Inger, R.F.1
-
39
-
-
55349116099
-
Evolution in a tropical archipelago: comparative phylogeography of Philippine fauna and flora reveals complex patterns of colonization and diversification
-
Jones A.W., Kennedy R.S. Evolution in a tropical archipelago: comparative phylogeography of Philippine fauna and flora reveals complex patterns of colonization and diversification. Biol. J. Linnean Soc. 2008, 95:620-639.
-
(2008)
Biol. J. Linnean Soc.
, vol.95
, pp. 620-639
-
-
Jones, A.W.1
Kennedy, R.S.2
-
41
-
-
0004152218
-
-
Oxford University Press, Oxford
-
Kennedy R.S., Gonzales P.C., Dickinson E.C., Miranda H.C., Fisher T.H. A Guide to the Birds of the Philippines 2000, Oxford University Press, Oxford.
-
(2000)
A Guide to the Birds of the Philippines
-
-
Kennedy, R.S.1
Gonzales, P.C.2
Dickinson, E.C.3
Miranda, H.C.4
Fisher, T.H.5
-
42
-
-
0010468429
-
The zoo-geographic boundaries between Asia and Australia and some Oriental sub-regions
-
Kloss C.B. The zoo-geographic boundaries between Asia and Australia and some Oriental sub-regions. Bull. Raff. Mus. 1929, 1929:1-10.
-
(1929)
Bull. Raff. Mus.
, vol.1929
, pp. 1-10
-
-
Kloss, C.B.1
-
43
-
-
0001934652
-
Evolutionary mechanisms of limb loss in tetrapods
-
Lande R. Evolutionary mechanisms of limb loss in tetrapods. Evolution 1978, 32:73-92.
-
(1978)
Evolution
, vol.32
, pp. 73-92
-
-
Lande, R.1
-
44
-
-
0001215039
-
Standards in herpetology and ichthyology: part I. Standard symbolic codes for institutional resource collections in herpetology and ichthyology
-
Leviton A.E., Gibbs R.H., Heal E., Dawson C.E. Standards in herpetology and ichthyology: part I. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. Copeia 1985, 1985:802-821.
-
(1985)
Copeia
, vol.1985
, pp. 802-821
-
-
Leviton, A.E.1
Gibbs, R.H.2
Heal, E.3
Dawson, C.E.4
-
45
-
-
77953322321
-
Species boundaries and cryptic lineage diversity in a Philippine forest skink complex (Reptilia; Squamata; Scincidae: Lygosominae)
-
Linkem C.A., Hesed K., Diesmos A.C., Brown R.M. Species boundaries and cryptic lineage diversity in a Philippine forest skink complex (Reptilia; Squamata; Scincidae: Lygosominae). Mol. Phylogenet. Evol. 2010, 56:572-585.
-
(2010)
Mol. Phylogenet. Evol.
, vol.56
, pp. 572-585
-
-
Linkem, C.A.1
Hesed, K.2
Diesmos, A.C.3
Brown, R.M.4
-
47
-
-
72049096137
-
Cryptic failure of partitioned Bayesian phylogenetic analyses: lost in the land of long trees
-
Marshall D.C. Cryptic failure of partitioned Bayesian phylogenetic analyses: lost in the land of long trees. Syst. Biol. 2010, 59:108-117.
-
(2010)
Syst. Biol.
, vol.59
, pp. 108-117
-
-
Marshall, D.C.1
-
48
-
-
33845446297
-
Accurate branch length estimation in partitioned Bayesian analyses requires accommodation of among-partition rate variation and attention to branch length priors
-
Marshall D.C., Simon C., Buckley T.R. Accurate branch length estimation in partitioned Bayesian analyses requires accommodation of among-partition rate variation and attention to branch length priors. Syst. Biol. 2006, 55:993-1003.
-
(2006)
Syst. Biol.
, vol.55
, pp. 993-1003
-
-
Marshall, D.C.1
Simon, C.2
Buckley, T.R.3
-
49
-
-
0034944085
-
Phylogenetic systematics of Southeast Asian flying lizards (Iguania: Agamidae: Draco) as inferred from mitochondrial DNA sequence data
-
McGuire J.A., Kiew B.H. Phylogenetic systematics of Southeast Asian flying lizards (Iguania: Agamidae: Draco) as inferred from mitochondrial DNA sequence data. Biol. J. Linnean Soc. 2001, 72:203-229.
-
(2001)
Biol. J. Linnean Soc.
, vol.72
, pp. 203-229
-
-
McGuire, J.A.1
Kiew, B.H.2
-
50
-
-
16244408335
-
Evidence of population genetic structure within the Florida worm lizard, Rhineura floridana (Amphisbaenia: Rhineuridae)
-
Mulvaney A., Castoe T.A., Kyle G.A., Kenneth L.K., Parkinson C.L. Evidence of population genetic structure within the Florida worm lizard, Rhineura floridana (Amphisbaenia: Rhineuridae). J. Herpetol. 2005, 39:118-124.
-
(2005)
J. Herpetol.
, vol.39
, pp. 118-124
-
-
Mulvaney, A.1
Castoe, T.A.2
Kyle, G.A.3
Kenneth, L.K.4
Parkinson, C.L.5
-
51
-
-
0000871195
-
Adaptive convergence and divergence of subterranean mammals
-
Nevo E. Adaptive convergence and divergence of subterranean mammals. Ann. Rev. 1979, 10:269-308.
-
(1979)
Ann. Rev.
, vol.10
, pp. 269-308
-
-
Nevo, E.1
-
52
-
-
1642341403
-
Bayesian phylogenetic analysis of combined data
-
Nylander J.A.A., Ronquist F., Huelsenbeck J.P., Nieves-Aldrey J.L. Bayesian phylogenetic analysis of combined data. Syst. Biol. 2004, 53:47-67.
-
(2004)
Syst. Biol.
, vol.53
, pp. 47-67
-
-
Nylander, J.A.A.1
Ronquist, F.2
Huelsenbeck, J.P.3
Nieves-Aldrey, J.L.4
-
53
-
-
76449090400
-
Origin and diversification of Philippine bulbuls
-
Oliveros C.H., Moyle R.G. Origin and diversification of Philippine bulbuls. Mol. Phylogenet. Evol. 2010, 54:822-832.
-
(2010)
Mol. Phylogenet. Evol.
, vol.54
, pp. 822-832
-
-
Oliveros, C.H.1
Moyle, R.G.2
-
54
-
-
0028097770
-
Detecting correlated evolution on phylogenies: a general method for the comparative analysis of discrete characters
-
Pagel M. Detecting correlated evolution on phylogenies: a general method for the comparative analysis of discrete characters. Proc. Roy. Soc. Lond. B 1994, 255:37-45.
-
(1994)
Proc. Roy. Soc. Lond. B
, vol.255
, pp. 37-45
-
-
Pagel, M.1
-
55
-
-
0000176247
-
Accounting for phylogenetic uncertainty in comparative studies of evolution and adaptation
-
Springer-Verlag, Berlin, Germany, M. Lassig, A. Valleriani (Eds.)
-
Pagel M., Lutzoni F. Accounting for phylogenetic uncertainty in comparative studies of evolution and adaptation. Biological Evolution and Statistical Physics 2002, 148-161. Springer-Verlag, Berlin, Germany. M. Lassig, A. Valleriani (Eds.).
-
(2002)
Biological Evolution and Statistical Physics
, pp. 148-161
-
-
Pagel, M.1
Lutzoni, F.2
-
56
-
-
1042304216
-
APE: analyses of phylogenetics and evolution in R language
-
Paradis E., Claude J., Strimmer K. APE: analyses of phylogenetics and evolution in R language. Bioinform. App. 2004, 20:289-290.
-
(2004)
Bioinform. App.
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
57
-
-
0008177082
-
Genetic divergence between populations of the pocket gopher, Thomomys umbrinus (Richardson)
-
Patton J.L., Feder J.H. Genetic divergence between populations of the pocket gopher, Thomomys umbrinus (Richardson). Saugetierkunde 1978, 43:12-30.
-
(1978)
Saugetierkunde
, vol.43
, pp. 12-30
-
-
Patton, J.L.1
Feder, J.H.2
-
58
-
-
0017567840
-
Genetic variation in Thomomys bottae pocket gophers: macrogeographic patterns
-
Patton J.L., Yang S.Y. Genetic variation in Thomomys bottae pocket gophers: macrogeographic patterns. Evolution 1977, 31:697-720.
-
(1977)
Evolution
, vol.31
, pp. 697-720
-
-
Patton, J.L.1
Yang, S.Y.2
-
59
-
-
34547645192
-
Cryptic animal species are homogeneously distributed among taxa and biogeographical regions
-
Pfenninger M., Schwenk K. Cryptic animal species are homogeneously distributed among taxa and biogeographical regions. BMC Evol. Biol. 2007, 7(1):121.
-
(2007)
BMC Evol. Biol.
, vol.7
, Issue.1
, pp. 121
-
-
Pfenninger, M.1
Schwenk, K.2
-
60
-
-
45849154165
-
JModelTest: Phylogenetic Model Averaging
-
Posada D. jModelTest: Phylogenetic Model Averaging. Mol. Biol. Evol. 2008, 25:1253-1256.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
61
-
-
0003757896
-
-
Prentice-Hall, Upper Saddle River, NJ
-
Pough F.H., Andrews R.M., Cadle J.E., Crump M.L., Savitzky A.H., Wells K.D. Herpetology 2004, Prentice-Hall, Upper Saddle River, NJ. third ed.
-
(2004)
Herpetology
-
-
Pough, F.H.1
Andrews, R.M.2
Cadle, J.E.3
Crump, M.L.4
Savitzky, A.H.5
Wells, K.D.6
-
62
-
-
79952735157
-
-
Tracer v1.4.
-
Rambaut, A., Drummond, A.J., 2007. Tracer v1.4. http://beast.bio.ed.ac.uk/Tracer.
-
(2007)
-
-
Rambaut, A.1
Drummond, A.J.2
-
63
-
-
79952735351
-
-
R Development Core Team, R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna. <>
-
R Development Core Team, 2008. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna. http://www.R-project.org.
-
(2008)
-
-
-
64
-
-
0041386108
-
MRBAYES 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
65
-
-
0030773749
-
A nonparametric approach to estimating divergence times in the absence of rate constancy
-
Sanderson M.J. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 1997, 14:1218-1231.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1218-1231
-
-
Sanderson, M.J.1
-
66
-
-
0016346229
-
Genic and chromosomal differentiation in pocket gophers of the Geomys bursarius group
-
Selander R.K., Kaufman D.W., Baker R.J., Williams S.L. Genic and chromosomal differentiation in pocket gophers of the Geomys bursarius group. Evolution 1974, 28:557-564.
-
(1974)
Evolution
, vol.28
, pp. 557-564
-
-
Selander, R.K.1
Kaufman, D.W.2
Baker, R.J.3
Williams, S.L.4
-
67
-
-
0036623258
-
An approximately unbiased test of phylogenetic tree selection
-
Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 2002, 51:492-508.
-
(2002)
Syst. Biol.
, vol.51
, pp. 492-508
-
-
Shimodaira, H.1
-
68
-
-
0036139287
-
CONSEL: for assessing the confidence of phylogenetic tree selection
-
Shimodaira H., Hasegawa M. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics 2001, 17:1246-1247.
-
(2001)
Bioinformatics
, vol.17
, pp. 1246-1247
-
-
Shimodaira, H.1
Hasegawa, M.2
-
69
-
-
79951715287
-
Squamata, Scincidae, Brachymeles elerae (Taylor, 1917): Rediscovery in Old Balbalan, Cordillera Mountain Range, Luzon Island, Philippines, and natural history
-
Siler C.D. Squamata, Scincidae, Brachymeles elerae (Taylor, 1917): Rediscovery in Old Balbalan, Cordillera Mountain Range, Luzon Island, Philippines, and natural history. Check List 2010, 6:616-618.
-
(2010)
Check List
, vol.6
, pp. 616-618
-
-
Siler, C.D.1
-
70
-
-
79952161749
-
Phylogeny-based species delimitation in Philippines loam-swimming skinks (Reptilia: Squamata: Scincidae: Brachymeles): taxonomic revision of the large-bodied, pentadactyl species groups and description of three new species
-
Siler C.D., Brown R.M. Phylogeny-based species delimitation in Philippines loam-swimming skinks (Reptilia: Squamata: Scincidae: Brachymeles): taxonomic revision of the large-bodied, pentadactyl species groups and description of three new species. Herpetol. Monogr. 2010, 24:1-54.
-
(2010)
Herpetol. Monogr.
, vol.24
, pp. 1-54
-
-
Siler, C.D.1
Brown, R.M.2
-
71
-
-
77649128640
-
A new limb-reduced, loam-swimming skink (Reptilia: Squamata: Scincidae: Genus Brachymeles) from central Luzon Island, Philippines
-
Siler C.D., Rico E.L., Duya M.R., Brown R.M. A new limb-reduced, loam-swimming skink (Reptilia: Squamata: Scincidae: Genus Brachymeles) from central Luzon Island, Philippines. Herpetologica 2009, 65:92-105.
-
(2009)
Herpetologica
, vol.65
, pp. 92-105
-
-
Siler, C.D.1
Rico, E.L.2
Duya, M.R.3
Brown, R.M.4
-
72
-
-
77649087917
-
A new loam-swimming skink, Genus Brachymeles (Reptilia: Squamata: Scincidae) from Luzon and Catanduanes islands, Philippines
-
Siler C.D., Diesmos A.C., Brown R.M. A new loam-swimming skink, Genus Brachymeles (Reptilia: Squamata: Scincidae) from Luzon and Catanduanes islands, Philippines. J. Herpetol. 2010, 44:49-60.
-
(2010)
J. Herpetol.
, vol.44
, pp. 49-60
-
-
Siler, C.D.1
Diesmos, A.C.2
Brown, R.M.3
-
73
-
-
77649130925
-
A new legless loam-swimming lizard (Reptilia: Squamata: Scincidae: Genus Brachymeles) from the Bicol Peninsula, Luzon Island, Philippines
-
Siler C.D., Balete D.S., Diesmos A.C., Brown R.M. A new legless loam-swimming lizard (Reptilia: Squamata: Scincidae: Genus Brachymeles) from the Bicol Peninsula, Luzon Island, Philippines. Copeia 2010, 2010:114-122.
-
(2010)
Copeia
, vol.2010
, pp. 114-122
-
-
Siler, C.D.1
Balete, D.S.2
Diesmos, A.C.3
Brown, R.M.4
-
74
-
-
77950028989
-
Phylogeny and biogeography of Philippine bent-toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification
-
Siler C.D., Oaks J.R., Esselstyn J.A., Diesmos A.C., Brown R.M. Phylogeny and biogeography of Philippine bent-toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification. Mol. Phylogenet. Evol. 2010, 55:699-710.
-
(2010)
Mol. Phylogenet. Evol.
, vol.55
, pp. 699-710
-
-
Siler, C.D.1
Oaks, J.R.2
Esselstyn, J.A.3
Diesmos, A.C.4
Brown, R.M.5
-
75
-
-
79952735727
-
-
Redescription of two poorly known loam-swimming skinks, Brachymeles bicolor and Brachymeles pathfinderi (Reptilia: Squamata: Scincidae) from the Philippines. J. Herpetol, in press.
-
Siler, C.D., Crombie, R.I., Diesmos, A.C., Brown, R.M., in press. Redescription of two poorly known loam-swimming skinks, Brachymeles bicolor and Brachymeles pathfinderi (Reptilia: Squamata: Scincidae) from the Philippines. J. Herpetol.
-
-
-
Siler, C.D.1
Crombie, R.I.2
Diesmos, A.C.3
Brown, R.M.4
-
76
-
-
79951618472
-
Rate heterogeneity, ancestral character state reconstruction, and the evolution of limb morphology in Lerista (Scincidae, Squamata)
-
Skinner A. Rate heterogeneity, ancestral character state reconstruction, and the evolution of limb morphology in Lerista (Scincidae, Squamata). Syst. Biol. 2010, 59:723-740.
-
(2010)
Syst. Biol.
, vol.59
, pp. 723-740
-
-
Skinner, A.1
-
77
-
-
77954139434
-
Plausibility of inferred ancestral phenotypes and the evaluations of alternative models of limb evolution in scincid lizards
-
Skinner A., Lee M.S.Y. Plausibility of inferred ancestral phenotypes and the evaluations of alternative models of limb evolution in scincid lizards. Biol. Lett. 2010, 6:354-358.
-
(2010)
Biol. Lett.
, vol.6
, pp. 354-358
-
-
Skinner, A.1
Lee, M.S.Y.2
-
78
-
-
57249105490
-
Rapid and repeated limb loss in a clade of scincid lizards
-
Skinner A., Lee M.S.Y., Hutchinson M.N. Rapid and repeated limb loss in a clade of scincid lizards. BMC Evol. Biol. 2008, 8:310.
-
(2008)
BMC Evol. Biol.
, vol.8
, pp. 310
-
-
Skinner, A.1
Lee, M.S.Y.2
Hutchinson, M.N.3
-
79
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
80
-
-
34548446701
-
Exploring new search algorithms and hardware for phylogenetics: RAxML meets the IBM cell
-
Stamatakis A., Blagojevic F., Nikolopoulos D., Antonopoulos C. Exploring new search algorithms and hardware for phylogenetics: RAxML meets the IBM cell. J. VLSI Signal Process. 2007, 48:271-286.
-
(2007)
J. VLSI Signal Process.
, vol.48
, pp. 271-286
-
-
Stamatakis, A.1
Blagojevic, F.2
Nikolopoulos, D.3
Antonopoulos, C.4
-
81
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML web servers
-
Stamatakis A., Hoover P., Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst. Biol. 2008, 57:758-771.
-
(2008)
Syst. Biol.
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
82
-
-
0347380973
-
Molecular phylogeny of the endemic Philippine rodent Apomys (Muridae) and the dynamics of diversification in an oceanic archipelago
-
Steppan S.J., Zawadzki C., Heaney L.R. Molecular phylogeny of the endemic Philippine rodent Apomys (Muridae) and the dynamics of diversification in an oceanic archipelago. Biol. J. Linnean Soc. 2003, 80:699-715.
-
(2003)
Biol. J. Linnean Soc.
, vol.80
, pp. 699-715
-
-
Steppan, S.J.1
Zawadzki, C.2
Heaney, L.R.3
-
84
-
-
77649160744
-
Brachymeles, a genus of Philippine lizards
-
Taylor E.H. Brachymeles, a genus of Philippine lizards. Phil. J. Sci. 1917, 12:267-279.
-
(1917)
Phil. J. Sci.
, vol.12
, pp. 267-279
-
-
Taylor, E.H.1
-
85
-
-
0039780836
-
-
The Lizards of the Philippine Islands. Department of Agriculture and Natual Resources, Bureau of Science, Manila, Publication
-
Taylor, E.H., 1922. The Lizards of the Philippine Islands. Department of Agriculture and Natual Resources, Bureau of Science, Manila, Publication, vol. 17, pp. 1-269.
-
(1922)
, vol.17
, pp. 1-269
-
-
Taylor, E.H.1
-
86
-
-
0343156577
-
Additions to the herpetological fauna of the Philippine Islands, IV
-
Taylor E.H. Additions to the herpetological fauna of the Philippine Islands, IV. Phil. J. Sci. 1925, 26:97-111.
-
(1925)
Phil. J. Sci.
, vol.26
, pp. 97-111
-
-
Taylor, E.H.1
-
87
-
-
9644269182
-
Molecular phylogenetics of squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree
-
Townsend T.M., Larson A., Louis E., Macey J.R. Molecular phylogenetics of squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree. Syst. Biol. 2004, 53:735-757.
-
(2004)
Syst. Biol.
, vol.53
, pp. 735-757
-
-
Townsend, T.M.1
Larson, A.2
Louis, E.3
Macey, J.R.4
-
88
-
-
41049084425
-
Rapid development of multiple nuclear loci for phylogenetic analysis using genomic resources: An example from squamate reptiles
-
Townsend T.M., Alegre R.E., Kelley S.T., Wiens J.J., Reeder T.W. Rapid development of multiple nuclear loci for phylogenetic analysis using genomic resources: An example from squamate reptiles. Mol. Phylogenet. Evol. 2008, 47:129-142.
-
(2008)
Mol. Phylogenet. Evol.
, vol.47
, pp. 129-142
-
-
Townsend, T.M.1
Alegre, R.E.2
Kelley, S.T.3
Wiens, J.J.4
Reeder, T.W.5
-
89
-
-
0034492377
-
Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations
-
Voris H.K. Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. J. Biogeogr. 2000, 27:1153-1167.
-
(2000)
J. Biogeogr.
, vol.27
, pp. 1153-1167
-
-
Voris, H.K.1
-
90
-
-
73349087858
-
A new bent-toed Gekko (Genus Cyrtodactylus) from southern Palawan Island, Philippines and clarification of the taxonomic status of C. annulatus
-
Welton L.J., Siler C.D., Diesmos A.C., Brown R.M. A new bent-toed Gekko (Genus Cyrtodactylus) from southern Palawan Island, Philippines and clarification of the taxonomic status of C. annulatus. Herpetologica 2009, 65:328-343.
-
(2009)
Herpetologica
, vol.65
, pp. 328-343
-
-
Welton, L.J.1
Siler, C.D.2
Diesmos, A.C.3
Brown, R.M.4
-
91
-
-
77953990947
-
Phylogeny-based species delimitation of souther Philippines bent-toed geckos and a new species of Cyrtodactylus (Squamata; Gekkonidae) from western Mindanao and the Sulu Archipelago
-
Welton L.J., Siler C.D., Diesmos A.C., Brown R.M. Phylogeny-based species delimitation of souther Philippines bent-toed geckos and a new species of Cyrtodactylus (Squamata; Gekkonidae) from western Mindanao and the Sulu Archipelago. Zootaxa 2010, 2390:49-68.
-
(2010)
Zootaxa
, vol.2390
, pp. 49-68
-
-
Welton, L.J.1
Siler, C.D.2
Diesmos, A.C.3
Brown, R.M.4
-
92
-
-
79952734566
-
-
Philippine bent-toed geckos of the Cyrtodactylus agusanensis complex: phylogeny, morphological diversity, and description of three new species. Herp. Monogr, in press.
-
Welton, L.J., Siler, C.D., Diesmos, A.C., Linkem, C.W., Brown, R.M., in press. Philippine bent-toed geckos of the Cyrtodactylus agusanensis complex: phylogeny, morphological diversity, and description of three new species. Herp. Monogr.
-
-
-
Welton, L.J.1
Siler, C.D.2
Diesmos, A.C.3
Linkem, C.W.4
Brown, R.M.5
-
93
-
-
0344287479
-
Phylogenetic relationships and limb loss in sub-Saharan African scincine lizards (Squamata:Scincidae)
-
Whiting A.S., Bauer A.M., Sites J.W. Phylogenetic relationships and limb loss in sub-Saharan African scincine lizards (Squamata:Scincidae). Mol. Phylogenet. Evol. 2003, 29:582-598.
-
(2003)
Mol. Phylogenet. Evol.
, vol.29
, pp. 582-598
-
-
Whiting, A.S.1
Bauer, A.M.2
Sites, J.W.3
-
94
-
-
0035688423
-
How lizards turn into snakes: a phylogenetic analysis of body-form evolution in anguid lizards
-
Wiens J.J., Slingluff J.L. How lizards turn into snakes: a phylogenetic analysis of body-form evolution in anguid lizards. Evolution 2001, 55:2303-2318.
-
(2001)
Evolution
, vol.55
, pp. 2303-2318
-
-
Wiens, J.J.1
Slingluff, J.L.2
-
95
-
-
33646690277
-
Why does a trait evolve multiple times within a clade? Repeated evolution of snake-like body form in squamate reptiles
-
Wiens J.J., Brandley M.C., Reeder T.W. Why does a trait evolve multiple times within a clade? Repeated evolution of snake-like body form in squamate reptiles. Evolution 2006, 60:123-141.
-
(2006)
Evolution
, vol.60
, pp. 123-141
-
-
Wiens, J.J.1
Brandley, M.C.2
Reeder, T.W.3
-
96
-
-
79952734741
-
-
AWTY: A System for Graphical Exploration of MCMC Convergence in Bayesian Phylogenetic Inference.
-
Wilgenbusch, J.C., Warren, D.L., Swofford, D.L., 2004. AWTY: A System for Graphical Exploration of MCMC Convergence in Bayesian Phylogenetic Inference. http://ceb.csit.fsu.edu/awty.
-
(2004)
-
-
Wilgenbusch, J.C.1
Warren, D.L.2
Swofford, D.L.3
-
97
-
-
0037593318
-
Collision, subduction and accretion events in the Philippines: a synthesis
-
Yumul G.P., Dimalanta C.B., Tamayao R.A., Maury R.C. Collision, subduction and accretion events in the Philippines: a synthesis. Isl. Arc 2003, 12:77-91.
-
(2003)
Isl. Arc
, vol.12
, pp. 77-91
-
-
Yumul, G.P.1
Dimalanta, C.B.2
Tamayao, R.A.3
Maury, R.C.4
-
98
-
-
42649098925
-
Tectonic setting of a composite terrain: a review of the Philippine island arc system
-
Yumul G.P., Dimalanta C.B., Maglambayan V.B. Tectonic setting of a composite terrain: a review of the Philippine island arc system. Geosci. J. 2008, 12:7-17.
-
(2008)
Geosci. J.
, vol.12
, pp. 7-17
-
-
Yumul, G.P.1
Dimalanta, C.B.2
Maglambayan, V.B.3
|