-
1
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
DOI 10.1038/35057062
-
Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., Dewar, K., Doyle, M., FitzHugh, W. et al. (2001) Initial sequencing and analysis of the human genome. Nature, 409, 860-921. (Pubitemid 32165345)
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
Funke, R.11
Gage, D.12
Harris, K.13
Heaford, A.14
Howland, J.15
Kann, L.16
Lehoczky, J.17
Levine, R.18
McEwan, P.19
McKernan, K.20
Meldrim, J.21
Mesirov, J.P.22
Miranda, C.23
Morris, W.24
Naylor, J.25
Raymond, C.26
Rosetti, M.27
Santos, R.28
Sheridan, A.29
Sougnez, C.30
Stange-Thomann, N.31
Stojanovic, N.32
Subramanian, A.33
Wyman, D.34
Rogers, J.35
Sulston, J.36
Ainscough, R.37
Beck, S.38
Bentley, D.39
Burton, J.40
Clee, C.41
Carter, N.42
Coulson, A.43
Deadman, R.44
Deloukas, P.45
Dunham, A.46
Dunham, I.47
Durbin, R.48
French, L.49
Grafham, D.50
Gregory, S.51
Hubbard, T.52
Humphray, S.53
Hunt, A.54
Jones, M.55
Lloyd, C.56
McMurray, A.57
Matthews, L.58
Mercer, S.59
Milne, S.60
Mullikin, J.C.61
Mungall, A.62
Plumb, R.63
Ross, M.64
Shownkeen, R.65
Sims, S.66
Waterston, R.H.67
Wilson, R.K.68
Hillier, L.W.69
McPherson, J.D.70
Marra, M.A.71
Mardis, E.R.72
Fulton, L.A.73
Chinwalla, A.T.74
Pepin, K.H.75
Gish, W.R.76
Chissoe, S.L.77
Wendl, M.C.78
Delehaunty, K.D.79
Miner, T.L.80
Delehaunty, A.81
Kramer, J.B.82
Cook, L.L.83
Fulton, R.S.84
Johnson, D.L.85
Minx, P.J.86
Clifton, S.W.87
Hawkins, T.88
Branscomb, E.89
Predki, P.90
Richardson, P.91
Wenning, S.92
Slezak, T.93
Doggett, N.94
Cheng, J.-F.95
Olsen, A.96
Lucas, S.97
Elkin, C.98
Uberbacher, E.99
more..
-
2
-
-
1542513556
-
Mobile Elements: Drivers of Genome Evolution
-
DOI 10.1126/science.1089670
-
Kazazian, H.H. Jr (2004) Mobile elements: drivers of genome evolution. Science, 303, 1626-1632. (Pubitemid 38338313)
-
(2004)
Science
, vol.303
, Issue.5664
, pp. 1626-1632
-
-
Kazazian Jr., H.H.1
-
3
-
-
70349318211
-
The impact of retrotransposons on human genome evolution
-
Cordaux, R. and Batzer, M.A. (2009) The impact of retrotransposons on human genome evolution. Nat. Rev. Genet., 10, 691-703.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 691-703
-
-
Cordaux, R.1
Batzer, M.A.2
-
4
-
-
0034079713
-
Human LINE retrotransposons generate processed pseudogenes
-
DOI 10.1038/74184
-
Esnault, C., Maestre, J. and Heidmann, T. (2000) Human LINE retrotransposons generate processed pseudogenes. Nat. Genet., 24, 363-367. (Pubitemid 30187433)
-
(2000)
Nature Genetics
, vol.24
, Issue.4
, pp. 363-367
-
-
Esnault, C.1
Maestre, J.2
Heidmann, T.3
-
5
-
-
0035144498
-
Human L1 retrotransposition: cis preference versus trans complementation
-
DOI 10.1128/MCB.21.4.1429-1439.2001
-
Wei, W., Gilbert, N., Ooi, S.L., Lawler, J.F., Ostertag, E.M., Kazazian, H.H., Boeke, J.D. and Moran, J.V. (2001) Human L1 retrotransposition: cis preference versus trans complementation. Mol. Cell Biol., 21, 1429-1439. (Pubitemid 32114989)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.4
, pp. 1429-1439
-
-
Wei, W.1
Gilbert, N.2
Ooi, S.L.3
Lawler, J.F.4
Ostertag, E.M.5
Kazazian, H.H.6
Boeke, J.D.7
Moran, J.V.8
-
6
-
-
0041353551
-
LINE-mediated retrotransposition of marked Alu sequences
-
DOI 10.1038/ng1223
-
Dewannieux, M., Esnault, C. and Heidmann, T. (2003) LINE-mediated retrotransposition of marked Alu sequences. Nat. Genet., 35, 41-48. (Pubitemid 37048594)
-
(2003)
Nature Genetics
, vol.35
, Issue.1
, pp. 41-48
-
-
Dewannieux, M.1
Esnault, C.2
Heidmann, T.3
-
7
-
-
0345636604
-
SVA Elements Are Nonautonomous Retrotransposons that Cause Disease in Humans
-
DOI 10.1086/380207
-
Ostertag, E.M., Goodier, J.L., Zhang, Y. and Kazazian, H.H. Jr (2003) SVA elements are nonautonomous retrotransposons that cause disease in humans. Am. J. Hum. Genet., 73, 1444-1451. (Pubitemid 38037435)
-
(2003)
American Journal of Human Genetics
, vol.73
, Issue.6
, pp. 1444-1451
-
-
Ostertag, E.M.1
Goodier, J.L.2
Zhang, Y.3
Kazazian Jr., H.H.4
-
8
-
-
28444448708
-
SVA elements: A hominid-specific retroposon family
-
DOI 10.1016/j.jmb.2005.09.085, PII S0022283605012039
-
Wang, H., Xing, J., Grover, D., Hedges, D.J., Han, K., Walker, J.A. and Batzer, M.A. (2005) SVA elements: a hominid-specific retroposon family. J. Mol. Biol., 354, 994-1007. (Pubitemid 41735518)
-
(2005)
Journal of Molecular Biology
, vol.354
, Issue.4
, pp. 994-1007
-
-
Wang, H.1
Xing, J.2
Grover, D.3
Hedges, D.J.4
Han, K.5
Walker, J.A.6
Batzer M.A7
-
9
-
-
40449139336
-
Mammalian non-LTR retrotransposons: For better or worse, in sickness and in health
-
DOI 10.1101/gr.5558208
-
Belancio, V.P., Hedges, D.J. and Deininger, P. (2008) Mammalian non-LTR retrotransposons: for better or worse, in sickness and in health. Genome Res., 18, 343-358. (Pubitemid 351347078)
-
(2008)
Genome Research
, vol.18
, Issue.3
, pp. 343-358
-
-
Belancio, V.P.1
Hedges, D.J.2
Deininger, P.3
-
10
-
-
22844438250
-
A systematic analysis of LINE-1 endonuclease-dependent retrotranspositional events causing human genetic disease
-
DOI 10.1007/s00439-005-1321-0
-
Chen, J.M., Stenson, P.D., Cooper, D.N. and Ferec, C. (2005) A systematic analysis of LINE-1 endonuclease-dependent retrotranspositional events causing human genetic disease. Hum. Genet., 117, 411-427. (Pubitemid 41236363)
-
(2005)
Human Genetics
, vol.117
, Issue.5
, pp. 411-427
-
-
Chen, J.-M.1
Stenson, P.D.2
Cooper, D.N.3
Ferec, C.4
-
11
-
-
0037965788
-
Hot L1s account for the bulk of retrotransposition in the human population
-
DOI 10.1073/pnas.0831042100
-
Brouha, B., Schustak, J., Badge, R.M., Lutz-Prigge, S., Farley, A.H., Moran, J.V. and Kazazian, H.H. Jr (2003) Hot L1s account for the bulk of retrotransposition in the human population. Proc. Natl Acad. Sci. USA, 100, 5280-5285. (Pubitemid 36542696)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.9
, pp. 5280-5285
-
-
Brouha, B.1
Schustak, J.2
Badge, R.M.3
Lutz-Prigge, S.4
Farley, A.H.5
Morant, J.V.6
Kazazian Jr., H.H.7
-
12
-
-
77953880842
-
LINE-1 retrotransposition activity in human genomes
-
Beck, C.R., Collier, P., Macfarlane, C., Malig, M., Kidd, J.M., Eichler, E.E., Badge, R.M. and Moran, J.V. (2010) LINE-1 retrotransposition activity in human genomes. Cell, 141, 1159-1170.
-
(2010)
Cell
, vol.141
, pp. 1159-1170
-
-
Beck, C.R.1
Collier, P.2
MacFarlane, C.3
Malig, M.4
Kidd, J.M.5
Eichler, E.E.6
Badge, R.M.7
Moran, J.V.8
-
13
-
-
77953892366
-
Mobile interspersed repeats are major structural variants in the human genome
-
Huang, C.R., Schneider, A.M., Lu, Y., Niranjan, T., Shen, P., Robinson, M.A., Steranka, J.P., Valle, D., Civin, C.I., Wang, T. et al. (2010) Mobile interspersed repeats are major structural variants in the human genome. Cell, 141, 1171-1182.
-
(2010)
Cell
, vol.141
, pp. 1171-1182
-
-
Huang, C.R.1
Schneider, A.M.2
Lu, Y.3
Niranjan, T.4
Shen, P.5
Robinson, M.A.6
Steranka, J.P.7
Valle, D.8
Civin, C.I.9
Wang, T.10
-
14
-
-
77955160719
-
High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes
-
Ewing, A.D. and Kazazian, H.H. Jr (2010) High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes. Genome Res., 20, 1262-1270.
-
(2010)
Genome Res.
, vol.20
, pp. 1262-1270
-
-
Ewing, A.D.1
Kazazian Jr., H.H.2
-
15
-
-
77953889472
-
Natural mutagenesis of human genomes by endogenous retrotransposons
-
Iskow, R.C., McCabe, M.T., Mills, R.E., Torene, S., Pittard, W.S., Neuwald, A.F., Van Meir, E.G., Vertino, P.M. and Devine, S.E. (2010) Natural mutagenesis of human genomes by endogenous retrotransposons. Cell, 141, 1253-1261.
-
(2010)
Cell
, vol.141
, pp. 1253-1261
-
-
Iskow, R.C.1
McCabe, M.T.2
Mills, R.E.3
Torene, S.4
Pittard, W.S.5
Neuwald, A.F.6
Van Meir, E.G.7
Vertino, P.M.8
Devine, S.E.9
-
16
-
-
0030606320
-
High frequency retrotransposition in cultured mammalian cells
-
DOI 10.1016/S0092-8674(00)81998-4
-
Moran, J.V., Holmes, S.E., Naas, T.P., DeBerardinis, R.J., Boeke, J.D. and Kazazian, H.H. Jr (1996) High frequency retrotransposition in cultured mammalian cells. Cell, 87, 917-927. (Pubitemid 26404290)
-
(1996)
Cell
, vol.87
, Issue.5
, pp. 917-927
-
-
Moran, J.V.1
Holmes, S.E.2
Naas, T.P.3
DeBerardinis, R.J.4
Boeke, J.D.5
Kazazian Jr., H.H.6
-
17
-
-
70349774458
-
The L1 retrotransposition assay: A retrospective and toolkit
-
Rangwala, S.H. and Kazazian, H.H. Jr (2009) The L1 retrotransposition assay: a retrospective and toolkit. Methods, 49, 219-226.
-
(2009)
Methods
, vol.49
, pp. 219-226
-
-
Rangwala, S.H.1
Kazazian Jr., H.H.2
-
18
-
-
0034633295
-
A transient assay reveals that cultured human cells can accommodate multiple LINE-1 retrotransposition events
-
Wei, W., Morrish, T.A., Alisch, R.S. and Moran, J.V. (2000) A transient assay reveals that cultured human cells can accommodate multiple LINE-1 retrotransposition events. Anal. Biochem., 284, 435-438.
-
(2000)
Anal. Biochem.
, vol.284
, pp. 435-438
-
-
Wei, W.1
Morrish, T.A.2
Alisch, R.S.3
Moran, J.V.4
-
19
-
-
0034653773
-
Determination of L1 retrotransposition kinetics in cultured cells
-
Ostertag, E.M., Prak, E.T., DeBerardinis, R.J., Moran, J.V. and Kazazian, H.H. Jr (2000) Determination of L1 retrotransposition kinetics in cultured cells. Nucleic Acids Res., 28, 1418-1423. (Pubitemid 30142685)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.6
, pp. 1418-1423
-
-
Ostertag, E.M.1
Luning Prak, E.T.2
DeBerardinis, R.J.3
Moran, J.V.4
Kazazian Jr., H.H.5
-
20
-
-
70349773120
-
Plug and play modular strategies for synthetic retrotransposons
-
An, W., Davis, E.S., Thompson, T.L., O'Donnell, K.A., Lee, C.Y. and Boeke, J.D. (2009) Plug and play modular strategies for synthetic retrotransposons. Methods, 49, 227-235.
-
(2009)
Methods
, vol.49
, pp. 227-235
-
-
An, W.1
Davis, E.S.2
Thompson, T.L.3
O'Donnell, K.A.4
Lee, C.Y.5
Boeke, J.D.6
-
21
-
-
77951090956
-
Repeat-induced gene silencing of L1 transgenes is correlated with differential promoter methylation
-
Rosser, J.M. and An, W. (2010) Repeat-induced gene silencing of L1 transgenes is correlated with differential promoter methylation. Gene, 456, 15-23.
-
(2010)
Gene
, vol.456
, pp. 15-23
-
-
Rosser, J.M.1
An, W.2
-
22
-
-
0032816281
-
Full-length human L1 insertions retain the capacity for high frequency retrotransposition in cultured cells
-
DOI 10.1093/hmg/8.8.1557
-
Kimberland, M.L., Divoky, V., Prchal, J., Schwahn, U., Berger, W. and Kazazian, H.H. Jr (1999) Full-length human L1 insertions retain the capacity for high frequency retrotransposition in cultured cells. Hum. Mol. Genet., 8, 1557-1560. (Pubitemid 29374091)
-
(1999)
Human Molecular Genetics
, vol.8
, Issue.8
, pp. 1557-1560
-
-
Kimberland, M.L.1
Divoky, V.2
Prchal, J.3
Schwahn, U.4
Berger, W.5
Kazazian Jr., H.H.6
-
23
-
-
33845484658
-
Active retrotransposition by a synthetic L1 element in mice
-
DOI 10.1073/pnas.0605300103
-
An, W., Han, J.S., Wheelan, S.J., Davis, E.S., Coombes, C.E., Ye, P., Triplett, C. and Boeke, J.D. (2006) Active retrotransposition by a synthetic L1 element in mice. Proc. Natl Acad. Sci. USA, 103, 18662-18667. (Pubitemid 44913467)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.49
, pp. 18662-18667
-
-
An, W.1
Han, J.S.2
Wheelan, S.J.3
Davis, E.S.4
Coombes, C.E.5
Ye, P.6
Triplett, C.7
Boeke, J.D.8
-
24
-
-
2442671716
-
A highly active synthetic mammalian retrotransposon
-
DOI 10.1038/nature02535
-
Han, J.S. and Boeke, J.D. (2004) A highly active synthetic mammalian retrotransposon. Nature, 429, 314-318. (Pubitemid 38684818)
-
(2004)
Nature
, vol.429
, Issue.6989
, pp. 314-318
-
-
Han, J.S.1
Boeke, J.D.2
-
25
-
-
0021474109
-
Defining the beginning and end of KpnI family segments
-
Grimaldi, G., Skowronski, J. and Singer, M.F. (1984) Defining the beginning and end of KpnI family segments. EMBO J., 3, 1753-1759.
-
(1984)
EMBO J.
, vol.3
, pp. 1753-1759
-
-
Grimaldi, G.1
Skowronski, J.2
Singer, M.F.3
-
26
-
-
0003308786
-
Molecular archeology of L1 insertions in the human genome
-
research0052
-
Szak, S.T., Pickeral, O.K., Makalowski, W., Boguski, M.S., Landsman, D. and Boeke, J.D. (2002) Molecular archeology of L1 insertions in the human genome. Genome Biol., 3, research0052.
-
(2002)
Genome Biol.
, vol.3
-
-
Szak, S.T.1
Pickeral, O.K.2
Makalowski, W.3
Boguski, M.S.4
Landsman, D.5
Boeke, J.D.6
-
27
-
-
65649108137
-
The RNA polymerase dictates ORF1 requirement and timing of LINE and SINE retrotransposition
-
Kroutter, E.N., Belancio, V.P., Wagstaff, B.J. and Roy-Engel, A.M. (2009) The RNA polymerase dictates ORF1 requirement and timing of LINE and SINE retrotransposition. PLoS Genet., 5, e1000458.
-
(2009)
PLoS Genet.
, vol.5
-
-
Kroutter, E.N.1
Belancio, V.P.2
Wagstaff, B.J.3
Roy-Engel, A.M.4
-
28
-
-
77955495399
-
Epigenetic silencing of engineered L1 retrotransposition events in human embryonic carcinoma cells
-
Garcia-Perez, J.L., Morell, M., Scheys, J.O., Kulpa, D.A., Morell, S., Carter, C.C., Hammer, G.D., Collins, K.L., O'Shea, K.S., Menendez, P. et al. (2010) Epigenetic silencing of engineered L1 retrotransposition events in human embryonic carcinoma cells. Nature, 466, 769-773.
-
(2010)
Nature
, vol.466
, pp. 769-773
-
-
Garcia-Perez, J.L.1
Morell, M.2
Scheys, J.O.3
Kulpa, D.A.4
Morell, S.5
Carter, C.C.6
Hammer, G.D.7
Collins, K.L.8
O'Shea, K.S.9
Menendez, P.10
-
29
-
-
33645466204
-
LINE-1 RNA splicing and influences on mammalian gene expression
-
Belancio, V.P., Hedges, D.J. and Deininger, P. (2006) LINE-1 RNA splicing and influences on mammalian gene expression. Nucleic Acids Res., 34, 1512-1521.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 1512-1521
-
-
Belancio, V.P.1
Hedges, D.J.2
Deininger, P.3
|