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Volumn 134, Issue 5, 2011, Pages

Statistical approaches to forcefield calibration and prediction uncertainty in molecular simulation

Author keywords

[No Author keywords available]

Indexed keywords

BAYESIAN; CALIBRATION MODEL; DATA SETS; EXPERIMENTAL DATA; FIELD PARAMETERS; FORCEFIELDS; LENNARD-JONES POTENTIAL; MEASUREMENT UNCERTAINTY; MOLECULAR SIMULATIONS; PREDICTION UNCERTAINTY; SIMULATION PREDICTION; STATISTICAL APPROACH; STATISTICAL SIMULATION;

EID: 79951535155     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3545069     Document Type: Article
Times cited : (92)

References (72)
  • 1
    • 67649921178 scopus 로고    scopus 로고
    • 10.1002/aic.11932
    • E. J. Maginn, AIChE J. 55 (6), 1304 (2009) 10.1002/aic.11932
    • (2009) AIChE J. , vol.55 , Issue.6 , pp. 1304
    • Maginn, E.J.1
  • 7
    • 34548732067 scopus 로고    scopus 로고
    • Transforming data into knowledge-Process Informatics for combustion chemistry
    • DOI 10.1016/j.proci.2006.08.121, Proceedings of the Combustion Institute - Thirty-First International Symposium on Combustion
    • M. Frenklach, Proc. Combust. Inst. 31, 125 (2007). 10.1016/j.proci.2006. 08.121 (Pubitemid 47424382)
    • (2007) Proceedings of the Combustion Institute , vol.31 , pp. 125-140
    • Frenklach, M.1
  • 9
    • 27644540700 scopus 로고    scopus 로고
    • Computational materials: Multi-scale modeling and simulation of nanostructured materials
    • DOI 10.1016/j.compscitech.2005.06.009, PII S0266353805002137
    • T. S. Gates, G. M. Odegard, S. J.V. Frankland, and T. C. Clancy, Compos. Sci. Technol. 65, 2416 (2005), 20th Anniversary Special Issue. 10.1016/j.compscitech.2005.06.009 (Pubitemid 41574396)
    • (2005) Composites Science and Technology , vol.65 , Issue.15-16 SPEC. ISS. , pp. 2416-2434
    • Gates, T.S.1    Odegard, G.M.2    Frankland, S.J.V.3    Clancy, T.C.4
  • 10
    • 33847673546 scopus 로고    scopus 로고
    • Predictions of the properties of water from first principles
    • DOI 10.1126/science.1136371
    • R. Bukowski, K. Szalewicz, G. C. Groenenboom, and A. Van Der Avoird, Science 315, 1249 (2007). 10.1126/science.1136371 (Pubitemid 46364257)
    • (2007) Science , vol.315 , Issue.5816 , pp. 1249-1252
    • Bukowski, R.1    Szalewicz, K.2    Groenenboom, G.C.3    Van Der Avoird, A.4
  • 14
    • 11044228523 scopus 로고    scopus 로고
    • Uncertainty associated with virtual measurements from computational quantum chemistry models
    • DOI 10.1088/0026-1394/41/6/003, PII S0026139404847704
    • K. K. Irikura, R. D. Johnson III, and R. N. Kacker, Metrologia 41, 369 (2004). 10.1088/0026-1394/41/6/003 (Pubitemid 40043974)
    • (2004) Metrologia , vol.41 , Issue.6 , pp. 369-375
    • Irikura, K.K.1    Johnson III, R.D.2    Kacker, R.N.3
  • 15
    • 67650890638 scopus 로고    scopus 로고
    • BIPM, IEC, IFCC, ILAC, ISO, IUPAC, IUPAP, and OIML, , Technical Report 100:2008 (Joint Committee for Guides in Metrology, JCGM)
    • BIPM, IEC, IFCC, ILAC, ISO, IUPAC, IUPAP, and OIML, Evaluation of measurement data-Guide to the expression of uncertainty in measurement (GUM)., Technical Report 100:2008 (Joint Committee for Guides in Metrology, JCGM, 2008).
    • (2008) Evaluation of Measurement Data-Guide to the Expression of Uncertainty in Measurement (GUM)
  • 19
    • 58149293678 scopus 로고    scopus 로고
    • 10.1529/biophysj.108.131623
    • B. Cooke and S. C. Schmidler, Biophys. J. 95, 4497 (2008). 10.1529/biophysj.108.131623
    • (2008) Biophys. J. , vol.95 , pp. 4497
    • Cooke, B.1    Schmidler, S.C.2
  • 20
    • 0000952715 scopus 로고    scopus 로고
    • 10.1016/S0006-3495(97)78884-2
    • O. N. de Souza and R. L. Ornstein, Biophys. J. 72, 2395 (1997). 10.1016/S0006-3495(97)78884-2
    • (1997) Biophys. J. , vol.72 , pp. 2395
    • De Souza, O.N.1    Ornstein, R.L.2
  • 21
    • 35948930962 scopus 로고    scopus 로고
    • Effects of water model and simulation box size on protein diffusions motions
    • DOI 10.1021/jp0756247
    • K. Takemura and A. Kitao, J. Phys. Chem. B 111, 11870 (2007). 10.1021/jp0756247 (Pubitemid 350068898)
    • (2007) Journal of Physical Chemistry B , vol.111 , Issue.41 , pp. 11870-11872
    • Takemura, K.1    Kitao, A.2
  • 23
    • 34547648534 scopus 로고    scopus 로고
    • Liquid water simulation: A critical examination of cutoff length
    • DOI 10.1063/1.2198208
    • Y. Yonetani, J. Chem. Phys. 124, 204501 (2006). 10.1063/1.2198208 (Pubitemid 43838623)
    • (2006) Journal of Chemical Physics , vol.124 , Issue.20 , pp. 204501
    • Yonetani, Y.1
  • 25
    • 31544449433 scopus 로고    scopus 로고
    • Sensitivity analysis of thermodynamic properties of liquid water: A general approach to improve empirical potential
    • DOI 10.1021/jp0538868
    • T. D. Iordanov, G. K. Schenter, and B. C. Garrett, J. Phys. Chem. A 110, 762 (2006). 10.1021/jp0538868 (Pubitemid 43164669)
    • (2006) Journal of Physical Chemistry A , vol.110 , Issue.2 , pp. 762-771
    • Iordanov, T.D.1    Schenter, G.K.2    Garrett, B.C.3
  • 26
    • 0000471729 scopus 로고
    • 10.1021/j100068a034
    • S. B. Zhu and C. F. Wong, J. Phys. Chem. 98, 4695 (1994). 10.1021/j100068a034
    • (1994) J. Phys. Chem. , vol.98 , pp. 4695
    • Zhu, S.B.1    Wong, C.F.2
  • 27
    • 79951535599 scopus 로고    scopus 로고
    • edited by A. Saltelli, K. Chan, and E. M. Scott (Wiley, Chichester)
    • A. Saltelli, K. Chan, and E. M. Scott, Sentivity Analysis, edited by, A. Saltelli, K. Chan, and, E. M. Scott, (Wiley, Chichester, 2000).
    • (2000) Sentivity Analysis
    • Saltelli, A.1    Chan, K.2    Scott, E.M.3
  • 35
    • 33745834387 scopus 로고    scopus 로고
    • [Reliab. Eng. Syst. Saf. 91, 1358 (2006)] 10.1016/j.ress.2005.11.032
    • (2006) [Reliab. Eng. Syst. Saf. , vol.91 , pp. 1358
  • 37
    • 43049094796 scopus 로고    scopus 로고
    • Analysis of key comparison data and laboratory biases
    • DOI 10.1088/0026-1394/45/2/010, PII S0026139408736065
    • A. G. Chunovkina, C. Elster, I. Lira, and W. Woger, Metrologia 45, 211 (2008). 10.1088/0026-1394/45/2/010 (Pubitemid 351628298)
    • (2008) Metrologia , vol.45 , Issue.2 , pp. 211-216
    • Chunovkina, A.G.1    Elster, C.2    Lira, I.3    Woger, W.4
  • 43
    • 33745727561 scopus 로고    scopus 로고
    • [Reliab. Eng. Syst. Safe. 91, 1175 (2006)] 10.1016/j.ress.2005.11.017
    • (2006) [Reliab. Eng. Syst. Safe. , vol.91 , pp. 1175
  • 54
  • 55
    • 79951535306 scopus 로고    scopus 로고
    • Nist chemistry webbook
    • http://webbook.nist.gov/chemistry/ Nist chemistry webbook
  • 56
    • 34548403037 scopus 로고    scopus 로고
    • 10.5012/bkcs.2007.28.8.1371
    • S. H. Lee, Bull. Korean Chem. Soc. 28 (8), 1371 (2007). 10.5012/bkcs.2007.28.8.1371
    • (2007) Bull. Korean Chem. Soc. , vol.28 , Issue.8 , pp. 1371
    • Lee, S.H.1
  • 57
    • 34147179965 scopus 로고    scopus 로고
    • Molecular dynamics calculation of the viscosity of xenon gas
    • DOI 10.1007/s10765-007-0162-6
    • R. D. Mountain, Int. J. Thermophys. 28, 259 (2007). 10.1007/s10765-007- 0162-6 (Pubitemid 46568272)
    • (2007) International Journal of Thermophysics , vol.28 , Issue.1 , pp. 259-267
    • Mountain, R.D.1
  • 68
    • 84927489296 scopus 로고
    • 10.1080/08927029208048258
    • A. Z. Panagiotopoulos, Mol. Simul. 9, 1 (1992). 10.1080/08927029208048258
    • (1992) Mol. Simul. , vol.9 , pp. 1
    • Panagiotopoulos, A.Z.1
  • 69
    • 84907891355 scopus 로고
    • 10.1080/00268978700101491
    • A. Z. Panagiotopoulos, Mol. Phys. 61 (4), 813 (1987). 10.1080/00268978700101491
    • (1987) Mol. Phys. , vol.61 , Issue.4 , pp. 813
    • Panagiotopoulos, A.Z.1


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