Purification, crystallization and preliminary crystallographic analysis of the SH2 domain of IL-2-inducible T-cell kinase

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 67, Issue 2, 2011, Pages 269-273

  Joseph, Raji E ^a   Ginder, Nathaniel D ^a   Hoy, Julie A ^a   Nix, Jay C ^b   Honzatko, Richard B ^a   Andreotti, Amy H ^a  

^a IOWA STATE UNIVERSITY   (United States)

^b LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

IL 2 inducible T cell kinase; Proline cis trans isomerization; Prolyl imide bond; SH2 domain

Indexed keywords

EMT PROTEIN TYROSINE KINASE; EMT PROTEIN-TYROSINE KINASE; PEPTIDE; PROLINE; PROTEIN TYROSINE KINASE;

ANIMAL; ARTICLE; CHEMISTRY; CONFORMATION; CRYSTALLIZATION; METABOLISM; MOUSE; SRC HOMOLOGY DOMAIN; X RAY CRYSTALLOGRAPHY; X RAY DIFFRACTION;

ANIMALS; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; MICE; MOLECULAR CONFORMATION; PEPTIDES; PROLINE; PROTEIN-TYROSINE KINASES; SRC HOMOLOGY DOMAINS; X-RAY DIFFRACTION;

EID: 79951483230     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309110052346     Document Type: Article

References (38)

1. Andreotti, A. H. (2003). Biochemistry, 42, 9515-9524.
2. Brazin, K. N., Fulton, D. B. & Andreotti, A. H. (2000). J. Mol. Biol. 302, 607-623.
3. Brazin, K. N., Mallis, R. J., Fulton, D. B. & Andreotti, A. H. (2002). Proc. Natl Acad. Sci. USA, 99, 1899-1904.
4. Breheny, P. J., Laederach, A., Fulton, D. B. & Andreotti, A. H. (2003). J. Am. Chem. Soc. 125, 15706-15707.
5. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
6. Cotton, F. A., Hazen, E. E. Jr & Legg, M. J. (1979). Proc. Natl Acad. Sci. USA, 76, 2551-2555.
7. Eakin, C. M., Berman, A. J. &Miranker, A. D. (2006). Nature Struct. Mol. Biol. 13, 202-208.
8. Eckert, B., Martin, A., Balbach, J. & Schmid, F. X. (2005). Nature Struct. Mol. Biol. 12, 619-623.
9. Feng, Y., Hood, W. F., Forgey, R. W., Abegg, A. L., Caparon, M. H., Thiele, B. R., Leimgruber, R. M. & McWherter, C. A. (1997). Protein Sci. 6, 1777-1782.
10. Fischer, G. & Aumüller, T. (2003). Rev. Physiol. Biochem. Pharmacol. 148, 105-150.
11. French, S. & Wilson, K. (1978). Acta Cryst. A34, 517-525.
12. Golmohammadi, R., Valegård, K., Fridborg, K. & Liljas, L. (1993). J. Mol. Biol. 234, 620-639.
13. Grochulski, P., Li, Y., Schrag, J. D. & Cygler, M. (1994). Protein Sci. 3, 82-91.
14. Hynes, T. R. & Fox, R. O. (1991). Proteins, 10, 92-105.
15. Jorgensen, W. L. & Gao, J. (1988). J. Am. Chem. Soc. 110, 4212-4216.
16. Loll, P. A. & Lattman, E. E. (1989). Proteins, 5, 183-201.
17. Lummis, S. C., Beene, D. L., Lee, L. W., Lester, H. A., Broadhurst, R. W. & Dougherty, D. A. (2005). Nature (London), 438, 248-252.
18. Maigret, B., Perahia, D. & Pullman, B. (1970). J. Theor. Biol. 29, 275-291.
19. Mallis, R. J., Brazin, K. N., Fulton, D. B. & Andreotti, A. H. (2002). Nature Struct. Biol. 9, 900-905.
20. Nelson, C. J., Santos-Rosa, H. & Kouzarides, T. (2006). Cell, 126, 905-916.
21. OuYang, B., Pochapsky, S. S., Dang, M. & Pochapsky, T. C. (2008). Structure, 16, 916-923.
22. Pastorino, L., Sun, A., Lu, P.-J., Zhou, X. Z., Balastik, M., Finn, G., Wulf, G., Lim, J., Li, S.-H., Li, X., Xia,W., Nicholson, L. K. & Lu, K. P. (2006). Nature (London), 440, 528-534.
23. Pflugrath, J. W. (1999). Acta Cryst. D55, 1718-1725.
24. Pletneva, E. V., Sundd, M., Fulton, D. B. & Andreotti, A. H. (2006). J. Mol. Biol. 357, 550-561.
25. Santiveri, C. M., Pérez-Cañadillas, J. M., Vadivelu, M. K., Allen, M. D., Rutherford, T. J., Watkins, N. A. & Bycroft, M. (2004). J. Biol. Chem. 279, 34963-34970.
26. Schmid, F. X., Mayr, L. M., Mücke, M. & Schönbrunner, E. R. (1993). Adv. Protein Chem. 44, 25-66.
27. Schnur, D.M., Yuh, Y. H. & Dalton, D. R. (1989). J. Org. Chem. 54, 3779-3785.
28. Schulz, G. E. & Schirmer, R. H. (1979). Principles of Protein Structure, p. 25. New York: Springer.
29. Severin, A., Joseph, R. E., Boyken, S., Fulton, D. B. & Andreotti, A. H. (2009). J. Mol. Biol. 387, 726-743.
30. Stewart, D. E., Sarkar, A. & Wampler, J. E. (1990). J. Mol. Biol. 214, 253-260.
31. Svensson, L. A., Thulin, E. & Forsén, S. (1992). J. Mol. Biol. 223, 601-606.
32. Szebenyi, D. M. & Moffat, K. (1986). J. Biol. Chem. 261, 8761-8777.
33. Van Duyne, G. D., Standaert, R. F., Karplus, P. A., Schreiber, S. L. & Clardy, J. (1993). J. Mol. Biol. 229, 105-124.
34. Wedemeyer, W. J., Welker, E. & Scheraga, H. A. (2002). Biochemistry, 41, 14637-14644.
35. Weiss, M. S., Jabs, A. & Hilgenfeld, R. (1998). Nature Struct. Biol. 5, 676.
36. Wulf, G., Finn, G., Suizu, F. & Lu, K. P. (2005). Nature Cell Biol. 7, 435-441.
37. Yaffe, M. B., Schutkowski, M., Shen, M., Zhou, X. Z., Stukenberg, P. T., Rahfeld, J.-U., Xu, J., Kuang, J., Kirschner, M. W., Fischer, G., Cantley, L. C. & Lu, K. P. (1997). Science, 278, 1957-1960.
38. Zhou, X. Z., Kops, O., Werner, A., Lu, P.-J., Shen, M., Stoller, G., Küllertz, G., Stark, M., Fischer, G. & Lu, K. P. (2000). Mol. Cell, 6, 873-883.