-
1
-
-
0030920782
-
G protein mechanisms: Insights from structural analysis
-
S. R. Sprang, G protein mechanisms: Insights from structural analysis. Annu. Rev. Biochem. 66, 639-678 (1997).
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 639-678
-
-
Sprang, S.R.1
-
2
-
-
0037171778
-
Structural determinants for GoLoco-induced inhibition of nucleotide release by Ga subunits
-
R. J. Kimple, M. E. Kimple, L. Betts, J. Sondek, D. P. Siderovski, Structural determinants for GoLoco-induced inhibition of nucleotide release by Ga subunits. Nature 416, 878-881 (2002).
-
(2002)
Nature
, vol.416
, pp. 878-881
-
-
Kimple, R.J.1
Kimple, M.E.2
Betts, L.3
Sondek, J.4
Siderovski, D.P.5
-
3
-
-
15544373780
-
Structure of the p115RhoGEF rgRGS domain-Gα13/i1 chimera complex suggests convergent evolution of a GTPase activator
-
Z. Chen, W. D. Singer, P. C. Sternweis, S. R. Sprang, Structure of the p115RhoGEF rgRGS domain-Gα13/i1 chimera complex suggests convergent evolution of a GTPase activator. Nat. Struct. Mol. Biol. 12, 191-197 (2005).
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 191-197
-
-
Chen, Z.1
Singer, W.D.2
Sternweis, P.C.3
Sprang, S.R.4
-
4
-
-
0037161303
-
Direct identification of a G protein ubiquitination site by mass spectrometry
-
L. A. Marotti Jr., R. Newitt, Y. Wang, R. Aebersold, H. G. Dohlman, Direct identification of a G protein ubiquitination site by mass spectrometry. Biochemistry 41, 5067-5074 (2002).
-
(2002)
Biochemistry
, vol.41
, pp. 5067-5074
-
-
Marotti Jr., L.A.1
Newitt, R.2
Wang, Y.3
Aebersold, R.4
Dohlman, H.G.5
-
5
-
-
36849042975
-
GTPase acceleration as the rate-limiting step in Arabidopsis G protein-coupled sugar signaling
-
C. A. Johnston, J. P. Taylor, Y. Gao, A. J. Kimple, J. C. Grigston, J. G. Chen, D. P. Siderovski, A. M. Jones, F. S. Willard, GTPase acceleration as the rate-limiting step in Arabidopsis G protein-coupled sugar signaling. Proc. Natl. Acad. Sci. U.S.A. 104, 17317-17322 (2007).
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 17317-17322
-
-
Johnston, C.A.1
Taylor, J.P.2
Gao, Y.3
Kimple, A.J.4
Grigston, J.C.5
Chen, J.G.6
Siderovski, D.P.7
Jones, A.M.8
Willard, F.S.9
-
6
-
-
0023096422
-
The effect of activating ligands on the intrinsic fluorescence of guanine nucleotide-binding regulatory proteins
-
T. Higashijima, K. M. Ferguson, P. C. Sternweis, E. M. Ross, M. D. Smigel, A. G. Gilman, The effect of activating ligands on the intrinsic fluorescence of guanine nucleotide-binding regulatory proteins. J. Biol. Chem. 262, 752-756 (1987).
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 752-756
-
-
Higashijima, T.1
Ferguson, K.M.2
Sternweis, P.C.3
Ross, E.M.4
Smigel, M.D.5
Gilman, A.G.6
-
9
-
-
0027132717
-
The 2.2 Å crystal structure of transducin-a complexed with GTPγS
-
J. P. Noel, H. E. Hamm, P. B. Sigler, The 2.2 Å crystal structure of transducin-a complexed with GTPγS. Nature 366, 654-663 (1993).
-
(1993)
Nature
, vol.366
, pp. 654-663
-
-
Noel, J.P.1
Hamm, H.E.2
Sigler, P.B.3
-
11
-
-
4544338193
-
Perturbing the linker regions of the α-subunit of transducin: A new class of constitutively active GTP-binding proteins
-
S. Majumdar, S. Ramachandran, R. A. Cerione, Perturbing the linker regions of the α-subunit of transducin: A new class of constitutively active GTP-binding proteins. J. Biol. Chem. 279, 40137-40145 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 40137-40145
-
-
Majumdar, S.1
Ramachandran, S.2
Cerione, R.A.3
-
12
-
-
33748352984
-
Mechanism of the receptor-catalyzed activation of heterotrimeric G proteins
-
W. M. Oldham, N. Van Eps, A. M. Preininger, W. L. Hubbell, H. E. Hamm, Mechanism of the receptor-catalyzed activation of heterotrimeric G proteins. Nat. Struct. Mol. Biol. 13, 772-777 (2006).
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 772-777
-
-
Oldham, W.M.1
Van Eps, N.2
Preininger, A.M.3
Hubbell, W.L.4
Hamm, H.E.5
-
13
-
-
0035085209
-
Probing the mechanism of rhodopsincatalyzed transducin activation
-
M. Natochin, M. Moussaif, N. O. Artemyev, Probing the mechanism of rhodopsincatalyzed transducin activation. J. Neurochem. 77, 202-210 (2001).
-
(2001)
J. Neurochem.
, vol.77
, pp. 202-210
-
-
Natochin, M.1
Moussaif, M.2
Artemyev, N.O.3
-
14
-
-
0028044113
-
Requirement for intramolecular domain interaction in activation of G protein a subunit by aluminum fluoride and GDP but not by GTPγS
-
J. Codina, L. Birnbaumer, Requirement for intramolecular domain interaction in activation of G protein a subunit by aluminum fluoride and GDP but not by GTPγS. J. Biol. Chem. 269, 29339-29342 (1994).
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 29339-29342
-
-
Codina, J.1
Birnbaumer, L.2
-
15
-
-
0027741139
-
Separate GTP binding and GTPase activating domains of a Gα subunit
-
D. W. Markby, R. Onrust, H. R. Bourne, Separate GTP binding and GTPase activating domains of a Gα subunit. Science 262, 1895-1901 (1993).
-
(1993)
Science
, vol.262
, pp. 1895-1901
-
-
Markby, D.W.1
Onrust, R.2
Bourne, H.R.3
-
16
-
-
0344995242
-
Interdomain interactions regulate GDP release from heterotrimeric G proteins
-
A. E. Remmers, C. Engel, M. Liu, R. R. Neubig, Interdomain interactions regulate GDP release from heterotrimeric G proteins. Biochemistry 38, 13795-13800 (1999).
-
(1999)
Biochemistry
, vol.38
, pp. 13795-13800
-
-
Remmers, A.E.1
Engel, C.2
Liu, M.3
Neubig, R.R.4
-
17
-
-
3142723472
-
αo-coupled receptors are determined by Gα-specific interdomain interactions that affect GDP release rates
-
αo-coupled receptors are determined by Gα-specific interdomain interactions that affect GDP release rates. J. Biol. Chem. 279, 29787-29796 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 29787-29796
-
-
Zhang, Q.1
Dickson, A.2
Doupnik, C.A.3
-
18
-
-
0032474767
-
G-protein diseases furnish a model for the turn-on switch
-
T. Iiri, Z. Farfel, H. R. Bourne, G-protein diseases furnish a model for the turn-on switch. Nature 394, 35-38 (1998).
-
(1998)
Nature
, vol.394
, pp. 35-38
-
-
Iiri, T.1
Farfel, Z.2
Bourne, H.R.3
-
19
-
-
4344670030
-
Purification and in vitro functional analysis of the Arabidopsis thaliana regulator of G-protein signaling-1
-
F. S. Willard, D. P. Siderovski, Purification and in vitro functional analysis of the Arabidopsis thaliana regulator of G-protein signaling-1. Methods Enzymol. 389, 320-338 (2004).
-
(2004)
Methods Enzymol.
, vol.389
, pp. 320-338
-
-
Willard, F.S.1
Siderovski, D.P.2
-
20
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Z. Otwinowski, W. Minor, Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326 (1997).
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
21
-
-
34447508216
-
Phaser crystallographic software
-
A. J. McCoy, R. W. Grosse-Kunstleve, P. D. Adams, M. D. Winn, L. C. Storoni, R. J. Read, Phaser crystallographic software. J. Appl. Crystallogr. 40, 658-674 (2007).
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
24
-
-
34547592557
-
MolProbity: All-atom contacts and structure validation for proteins and nucleic acids
-
I. W. Davis, A. Leaver-Fay, V. B. Chen, J. N. Block, G. J. Kapral, X. Wang, L. W. Murray, W. B. Arendall III, J. Snoeyink, J. S. Richardson, D. C. Richardson, MolProbity: All-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res. 35, W375-W383 (2007).
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall III, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
-
25
-
-
77954288774
-
Dali server: Conservation mapping in 3D
-
L. Holm, P. Rosenstrom, Dali server: Conservation mapping in 3D. Nucleic Acids Res. 38, W545-W549 (2010).
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Holm, L.1
Rosenstrom, P.2
-
27
-
-
48249105901
-
Active nuclear receptors exhibit highly correlated AF-2 domain motions
-
D. G. Teotico, M. L. Frazier, F. Ding, N. V. Dokholyan, B. R. Temple, M. R. Redinbo, Active nuclear receptors exhibit highly correlated AF-2 domain motions. PLoS Comput. Biol. 4, e1000111 (2008).
-
(2008)
PLoS Comput. Biol.
, vol.4
-
-
Teotico, D.G.1
Frazier, M.L.2
Ding, F.3
Dokholyan, N.V.4
Temple, B.R.5
Redinbo, M.R.6
-
28
-
-
34248209062
-
Conformational dynamics of the major yeast phosphatidylinositol transfer protein Sec14p: Insight into the mechanisms of phospholipid exchange and diseases of Sec14p-like protein deficiencies
-
M. M. Ryan, B. R. Temple, S. E. Phillips, V. A. Bankaitis, Conformational dynamics of the major yeast phosphatidylinositol transfer protein Sec14p: Insight into the mechanisms of phospholipid exchange and diseases of Sec14p-like protein deficiencies. Mol. Biol. Cell 18, 1928-1942 (2007).
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 1928-1942
-
-
Ryan, M.M.1
Temple, B.R.2
Phillips, S.E.3
Bankaitis, V.A.4
-
29
-
-
0242663237
-
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations
-
Y. Duan, C. Wu, S. Chowdhury, M. C. Lee, G. Xiong, W. Zhang, R. Yang, P. Cieplak, R. Luo, T. Lee, J. Caldwell, J. Wang, P. Kollman, A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations. J. Comput. Chem. 24, 1999-2012 (2003).
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 1999-2012
-
-
Duan, Y.1
Wu, C.2
Chowdhury, S.3
Lee, M.C.4
Xiong, G.5
Zhang, W.6
Yang, R.7
Cieplak, P.8
Luo, R.9
Lee, T.10
Caldwell, J.11
Wang, J.12
Kollman, P.13
-
30
-
-
33847770470
-
Multiscale modeling of nucleosome dynamics
-
S. Sharma, F. Ding, N. V. Dokholyan, Multiscale modeling of nucleosome dynamics. Biophys. J. 92, 1457-1470 (2007).
-
(2007)
Biophys. J.
, vol.92
, pp. 1457-1470
-
-
Sharma, S.1
Ding, F.2
Dokholyan, N.V.3
-
31
-
-
79851476689
-
-
note
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Acknowledgments: We thank J. Vanhooke for valuable help throughout the crystallization process, B. Wallace and M. Miley for collecting diffraction data, A. Tripathy (University of North Carolina Macromolecular Interactions Facility) for instruction in CD spectroscopy, and J. Sondek for sharing equipment and insightful comments on the manuscript. Funding: This work was supported by grants from the National Institutes of General Medical Sciences (NIGMS) (R01GM065989), Department of Energy (DE-FG02-05er15671), and National Science Foundation (MCB-0723515 and MCB-0718202) to A.M.J. and NIGMS (R01GM080739) to H.G.D. J.C.J. was supported by a Ruth L. Kirschstein postdoctoral award. Author contributions: J.C.J. managed the project, made reagents, designed the experiments, acquired and analyzed the data, and wrote the manuscript; J.W.D. made reagents, acquired and analyzed the data, and crystallized the protein; M.M. solved the crystal structure, analyzed the data, and wrote the manuscript; B.R.S.T. designed the experiments, acquired and analyzed the data, and wrote the manuscript; H.G.D. and A.M.J. analyzed the data, managed the project, and wrote the manuscript. Competing interests: The authors declare that they have no competing interests. Accession numbers: Structure coordinates for AtGPA1 are deposited in the Protein Data Bank (www.pdb.org) as 2XTZ.
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