A partial set covering model for protein mixture identification using mass spectrometry data

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Volumn 8, Issue 2, 2011, Pages 368-380

  He, Zengyou ^a   Yang, Can ^b   Yu, Weichuan ^b  

^a DALIAN UNIVERSITY OF TECHNOLOGY   (China)

^b HONG KONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Hong Kong)

Author keywords

linear programming; mass spectrometry; optimization; peptide mass fingerprinting; Protein identification; proteomics; set covering

Indexed keywords

DATABASE SEARCHING; IDENTIFICATION ACCURACY; MASS SPECTROMETRY DATA; PEPTIDE MASS FINGERPRINTING; PROTEIN IDENTIFICATION; PROTEIN MIXTURES; PROTEOMES; PROTEOMICS; PURIFIED PROTEIN; SET COVERINGS; SET-COVERING MODEL; SIMULATED DATA; UNIFIED MODEL;

ALGORITHMS; COMPUTER SIMULATION; MASS SPECTROMETRY; MIXTURES; MOLECULAR BIOLOGY; OPTIMIZATION; PEPTIDES; SEARCH ENGINES;

LINEAR PROGRAMMING;

PROTEIN;

ALGORITHM; ARTICLE; CHEMISTRY; MASS SPECTROMETRY; METHODOLOGY; PEPTIDE MAPPING; PROTEIN DATABASE; PROTEOMICS; SEQUENCE ANALYSIS;

ALGORITHMS; DATABASES, PROTEIN; MASS SPECTROMETRY; PEPTIDE MAPPING; PROTEINS; PROTEOMICS; SEQUENCE ANALYSIS, PROTEIN;

EID: 79551679669     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2009.54     Document Type: Article

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