메뉴 건너뛰기




Volumn 6, Issue 3-4, 1999, Pages 327-342

De novo peptide sequencing via tandem mass spectrometry

Author keywords

Mass spectrometry; Protein sequencing

Indexed keywords

ALGORITHM; AMINO ACID ANALYSIS; AMINO ACID SEQUENCE; CONFERENCE PAPER; PRIORITY JOURNAL; PROTEIN ANALYSIS; SPECTRAL SENSITIVITY; TANDEM MASS SPECTROMETRY;

EID: 0032750293     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/106652799318300     Document Type: Conference Paper
Times cited : (513)

References (32)
  • 1
    • 0025038664 scopus 로고
    • Fast algorithm for peptide sequencing by mass spectroscopy
    • Bartels, C. 1990. Fast algorithm for peptide sequencing by mass spectroscopy. Biomed. Environ. Mass Spectrom. 19, 363-368.
    • (1990) Biomed. Environ. Mass Spectrom. , vol.19 , pp. 363-368
    • Bartels, C.1
  • 2
    • 0026425328 scopus 로고
    • Tandem mass spectrometry of peptides using hybrid and four-sector instruments: A comparative study
    • Bean, M.F., Carr, S.A., Thorne, G.C., Reilly, M.H., and Gaskell, S.J. 1991. Tandem mass spectrometry of peptides using hybrid and four-sector instruments: A comparative study. Anal. Chem. 63, 1473-1481.
    • (1991) Anal. Chem. , vol.63 , pp. 1473-1481
    • Bean, M.F.1    Carr, S.A.2    Thorne, G.C.3    Reilly, M.H.4    Gaskell, S.J.5
  • 3
    • 0025617140 scopus 로고
    • Appendix 5. nomenclature for peptide fragment ions (positive ions)
    • Biemann, K. 1990. Appendix 5. nomenclature for peptide fragment ions (positive ions). Methods. Enzymol. 193, 886-887.
    • (1990) Methods. Enzymol. , vol.193 , pp. 886-887
    • Biemann, K.1
  • 5
    • 0033565832 scopus 로고    scopus 로고
    • Role of accurate mass measurement (10 ppm) in protein identification strategies employing ms or ms/ms and database searching
    • Clauser, K.R., Baker, P.R., and Burlingame, A.L. 1999a. Role of accurate mass measurement (10 ppm) in protein identification strategies employing ms or ms/ms and database searching. Anal. Chem. 71, 2871-2882.
    • (1999) Anal. Chem. , vol.71 , pp. 2871-2882
    • Clauser, K.R.1    Baker, P.R.2    Burlingame, A.L.3
  • 8
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with acid sequences in a protein database
    • Eng, J.K., McCormack, A.L., and Yates, J.R. 1994. An approach to correlate tandem mass spectral data of peptides with acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5, 976-989.
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 9
    • 0031460873 scopus 로고    scopus 로고
    • A software tool for analysis of mass spectrometric disulfide mapping experiments
    • Fenyo, D. 1997. A software tool for analysis of mass spectrometric disulfide mapping experiments. CABIOS 13, 617-618.
    • (1997) CABIOS , vol.13 , pp. 617-618
    • Fenyo, D.1
  • 10
    • 0031865293 scopus 로고    scopus 로고
    • Protein identification using mass spectrometric information
    • Fenyo, D., Qin, J., and Chait, B.T. 1998. Protein identification using mass spectrometric information. Electrophoresis 19, 998-1005.
    • (1998) Electrophoresis , vol.19 , pp. 998-1005
    • Fenyo, D.1    Qin, J.2    Chait, B.T.3
  • 11
    • 0029145341 scopus 로고
    • A computer program to aid the sequencing of peptides in collision-activated decomposition experiments
    • Fernández de Cossío, J., Gonzales, J., and Besada, V. 1995. A computer program to aid the sequencing of peptides in collision-activated decomposition experiments. CABIOS 11(4), 427-434.
    • (1995) CABIOS , vol.11 , Issue.4 , pp. 427-434
    • Fernández De Cossío, J.1    Gonzales, J.2    Besada, V.3
  • 14
    • 0000875991 scopus 로고
    • Pattern-based algorithm for peptide sequencing from tandem high energy collision-induced dissociation mass spectra
    • Hines, W.M., Falick, A.M., Burlingame, A.L., and Gibson, B.W. 1992. Pattern-based algorithm for peptide sequencing from tandem high energy collision-induced dissociation mass spectra. J. Am. Soc. Mass. Spectrom. 3, 326-336.
    • (1992) J. Am. Soc. Mass. Spectrom. , vol.3 , pp. 326-336
    • Hines, W.M.1    Falick, A.M.2    Burlingame, A.L.3    Gibson, B.W.4
  • 17
    • 84987398179 scopus 로고
    • Computer-aided peptide sequencing by fast atom bombardment mass spectrometry
    • Ishikawa, K., and Niva, Y. 1986. Computer-aided peptide sequencing by fast atom bombardment mass spectrometry. Biomed. Environ. Mass Spectrom. 13, 373-380.
    • (1986) Biomed. Environ. Mass Spectrom. , vol.13 , pp. 373-380
    • Ishikawa, K.1    Niva, Y.2
  • 19
    • 0024427490 scopus 로고
    • Computer program (seqpep) to aid in the interpretation of high-energy collision tandem mass spectra of peptides
    • Johnson, R.J., and Biemann, K. 1989. Computer program (seqpep) to aid in the interpretation of high-energy collision tandem mass spectra of peptides. Biomed. Environ. Mass Spectrom. 18, 945-957.
    • (1989) Biomed. Environ. Mass Spectrom. , vol.18 , pp. 945-957
    • Johnson, R.J.1    Biemann, K.2
  • 20
    • 0031014649 scopus 로고    scopus 로고
    • The quadrupole ion trap mass spectrometer - A small solution to a big challenge
    • Jonscher, K.R., and Yates, J.R. 1997. The quadrupole ion trap mass spectrometer - a small solution to a big challenge. Anal. Biochem. 244, 1-15.
    • (1997) Anal. Biochem. , vol.244 , pp. 1-15
    • Jonscher, K.R.1    Yates, J.R.2
  • 21
  • 22
    • 0028575316 scopus 로고
    • Error-tolerant identification of peptides in sequence databases by peptide sequence tags
    • Mann, M., and Wilm, M. 1994. Error-tolerant identification of peptides in sequence databases by peptide sequence tags. Anal. Chem. 66, 4390-4399.
    • (1994) Anal. Chem. , vol.66 , pp. 4390-4399
    • Mann, M.1    Wilm, M.2
  • 23
    • 0001097977 scopus 로고
    • The advantages and versatility of high-energy collision-induced dissociation based strategy for the sequence and structural determination of proteins
    • Medzihradszky, K.F., and Burlingame, A.L. 1994. The advantages and versatility of high-energy collision-induced dissociation based strategy for the sequence and structural determination of proteins. Methods: Companion Methods Enzymol. 6, 284-303.
    • (1994) Methods: Companion Methods Enzymol. , vol.6 , pp. 284-303
    • Medzihradszky, K.F.1    Burlingame, A.L.2
  • 24
    • 0029657161 scopus 로고    scopus 로고
    • Peptide sequence determination by matrix-assisted laser ionization employing a tandem double focusing magnetic- Acceleration time-of-flight mass spectrometer
    • Medzihradszky, K.F., Adams, G.W., Bateman, M.R., Green, R.H., and Burlingame, A.L. 1996. Peptide sequence determination by matrix-assisted laser ionization employing a tandem double focusing magnetic- acceleration time-of-flight mass spectrometer. J. Am. Soc. Mass. Spectrom. 7, 1-10.
    • (1996) J. Am. Soc. Mass. Spectrom. , vol.7 , pp. 1-10
    • Medzihradszky, K.F.1    Adams, G.W.2    Bateman, M.R.3    Green, R.H.4    Burlingame, A.L.5
  • 25
    • 0028824080 scopus 로고
    • Mass spectrometric approaches for the identification of gel-separated proteins
    • Patterson, S.D., and Aebersold, R. 1995. Mass spectrometric approaches for the identification of gel-separated proteins. Electrophoresis 16(10), 1791-1814.
    • (1995) Electrophoresis , vol.16 , Issue.10 , pp. 1791-1814
    • Patterson, S.D.1    Aebersold, R.2
  • 26
    • 84987395027 scopus 로고
    • Paas 3: A computer program to determine probable sequence of peptides from mass spectrometric data
    • Sakurai, T., Matsuo, T., Matsuda, H., and Katakuse, I. 1984. Paas 3: A computer program to determine probable sequence of peptides from mass spectrometric data. Biomed. Mass Spectrom. 11(8), 396-399.
    • (1984) Biomed. Mass Spectrom. , vol.11 , Issue.8 , pp. 396-399
    • Sakurai, T.1    Matsuo, T.2    Matsuda, H.3    Katakuse, I.4
  • 27
    • 0030960366 scopus 로고    scopus 로고
    • Rapid 'de novo' peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer
    • Shevchenko, A., Chernushevich, I., Ens, W., Standing, K.G., Thomson, B., Wilm, M., and Mann, M. 1997. Rapid 'de novo' peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer. Rapid Commun. Mass Spectrom. 11, 1015-1024.
    • (1997) Rapid Commun. Mass Spectrom. , vol.11 , pp. 1015-1024
    • Shevchenko, A.1    Chernushevich, I.2    Ens, W.3    Standing, K.G.4    Thomson, B.5    Wilm, M.6    Mann, M.7
  • 28
    • 0024287234 scopus 로고
    • An efficient algorithm for sequencing peptides using fast atom bombardment mass spectral data
    • Siegel, M.M., and Bauman, N. 1988. An efficient algorithm for sequencing peptides using fast atom bombardment mass spectral data. Biomed. Environ. Mass Spectrom. 15, 333-343.
    • (1988) Biomed. Environ. Mass Spectrom. , vol.15 , pp. 333-343
    • Siegel, M.M.1    Bauman, N.2
  • 29
    • 0030959279 scopus 로고    scopus 로고
    • Sequence database searches via de novo peptide sequencing by tandem mass spectrometry
    • Taylor, J.A., and Johnson, R.S. 1997. Sequence database searches via de novo peptide sequencing by tandem mass spectrometry. Rapid Commun. Mass Spectrom. 11, 1067-1075.
    • (1997) Rapid Commun. Mass Spectrom. , vol.11 , pp. 1067-1075
    • Taylor, J.A.1    Johnson, R.S.2
  • 30
    • 0026666837 scopus 로고
    • Primary structure of gal beta 1,3(4)glcnac alpha 2,3-sialyltransferase determined by mass spectrometry sequence analysis and molecular cloning. Evidence for a protein motif in the sialyltransferase gene family
    • Wen, D.X., Livingston, B.D., Medzihradszky, K.F., Kelm, S., Burlingame, A.L., and Paulson, J.C. 1992. Primary structure of gal beta 1,3(4)glcnac alpha 2,3-sialyltransferase determined by mass spectrometry sequence analysis and molecular cloning. Evidence for a protein motif in the sialyltransferase gene family. J. Biol. Chem. 267, 21011-21019.
    • (1992) J. Biol. Chem. , vol.267 , pp. 21011-21019
    • Wen, D.X.1    Livingston, B.D.2    Medzihradszky, K.F.3    Kelm, S.4    Burlingame, A.L.5    Paulson, J.C.6
  • 31
    • 0345508828 scopus 로고
    • Computer aided interpretation of low energy ms/ms mass spectra of peptides
    • Villafranca, J.J. ed., Academic Press, San Diego
    • Yates, J.R., Griffin, P.R., Hood, L.E., Zhou, J.X. 1991. Computer aided interpretation of low energy ms/ms mass spectra of peptides, 477-485. In Villafranca, J.J. ed., Techniques in Protein Chemistry II. Academic Press, San Diego.
    • (1991) Techniques in Protein Chemistry II , pp. 477-485
    • Yates, J.R.1    Griffin, P.R.2    Hood, L.E.3    Zhou, J.X.4
  • 32
    • 0025115285 scopus 로고
    • Determination of the primary structure of peptides using fast atom bombardment mass spectrometry
    • 1990
    • Zidarov, D., Thibault, P., Evans, M.J., and Bertrand, M.J. 1990. Determination of the primary structure of peptides using fast atom bombardment mass spectrometry. Biomed. Environ. Mass Spectrom. 19, 13-16. 1990.
    • (1990) Biomed. Environ. Mass Spectrom. , vol.19 , pp. 13-16
    • Zidarov, D.1    Thibault, P.2    Evans, M.J.3    Bertrand, M.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.