메뉴 건너뛰기




Volumn 2, Issue 2, 2010, Pages 203-211

Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T)

(38)  Sikorski, Johannes a   Lapidus, Alla b   Copeland, Alex b   Misra, Monica b,c   Glavina Del Rio, Tijana b   Nolan, Matt b   Lucas, Susan b   Chen, Feng b   Tice, Hope b   Cheng, Jan Fang b   Jando, Marlen a   Schneider, Susanne a   Bruce, David b,c   Goodwin, Lynne b,c   Pitluck, Sam b   Liolios, Konstantinos b   Mikhailova, Natalia b   Pati, Amrita b   Ivanova, Natalia b   Mavromatis, Konstantinos b   more..


Author keywords

Aerobic; Corynebacterineae; GEBA; Non sporeforming; Novel mycolic acid; Opportunistic pathogen

Indexed keywords

ARCHAEA; BACTERIA (MICROORGANISMS); CORYNEBACTERINEAE; SEGNILIPARACEAE; SEGNILIPARUS; SEGNILIPARUS ROTUNDUS;

EID: 79551616999     PISSN: 19443277     EISSN: None     Source Type: Journal    
DOI: 10.4056/sigs.791633     Document Type: Article
Times cited : (9)

References (25)
  • 1
    • 22544456002 scopus 로고    scopus 로고
    • Novel mycolic acid-containing bacteria in the family Segniliparaceae fam. nov., including the genus Segniliparus gen. nov., with descriptions of Segniliparus rotundus sp. nov. and Segniliparus rugosus sp. nov
    • PubMed doi:10.1099/ijs.0.63465-0
    • Butler WR, Floyd MM, Brown JM, Toney SR, Daneshvar MI, Cooksey RC, Carr J, Steigerwalt AG, Charles N. Novel mycolic acid-containing bacteria in the family Segniliparaceae fam. nov., including the genus Segniliparus gen. nov., with descriptions of Segniliparus rotundus sp. nov. and Segniliparus rugosus sp. nov. Int J Syst Evol Microbiol 2005; 55:1615-1624. PubMed doi:10.1099/ijs.0.63465-0
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1615-1624
    • Butler, W.R.1    Floyd, M.M.2    Brown, J.M.3    Toney, S.R.4    Daneshvar, M.I.5    Cooksey, R.C.6    Carr, J.7    Steigerwalt, A.G.8    Charles, N.9
  • 4
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • PubMed doi:10.1099/ijs.0.64915-0
    • Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, Lim YW. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 2007; 57:2259-2261. PubMed doi:10.1099/ijs.0.64915-0
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 5
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • PubMed
    • Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 2000; 17:540-552. PubMed
    • (2000) Mol Biol Evol , vol.17 , pp. 540-552
    • Castresana, J.1
  • 6
    • 0036203448 scopus 로고    scopus 로고
    • Multiple sequence alignment using partial order graphs
    • PubMed doi:10.1093/bioinformatics/18.3.452
    • Lee C, Grasso C, Sharlow MF. Multiple sequence alignment using partial order graphs. Bioinformatics 2002; 18:452-464. PubMed doi:10.1093/bioinformatics/18.3.452
    • (2002) Bioinformatics , vol.18 , pp. 452-464
    • Lee, C.1    Grasso, C.2    Sharlow, M.F.3
  • 7
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML web servers
    • PubMed doi:10.1080/10635150802429642
    • Stamatakis A, Hoover P, Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst Biol 2008; 57:758-771. PubMed doi:10.1080/10635150802429642
    • (2008) Syst Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 9
    • 75549086416 scopus 로고    scopus 로고
    • The Genomes On Line Database (GOLD) in 2009: Status of genomic and metagenomic projects and their associated metadata
    • PubMed doi:10.1093/nar/gkp848
    • Liolios K, Chen IM, Mavromatis K, Tavernarakis N, Hugenholtz P, Markowitz VM, Kyrpides NC. The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res 2010; 38:D346-D354. PubMed doi:10.1093/nar/gkp848
    • (2010) Nucleic Acids Res , vol.38
    • Liolios, K.1    Chen, I.M.2    Mavromatis, K.3    Tavernarakis, N.4    Hugenholtz, P.5    Markowitz, V.M.6    Kyrpides, N.C.7
  • 13
    • 0025300402 scopus 로고
    • Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
    • PubMed doi:10.1073/pnas.87.12.4576
    • Woese CR, Kandler O, Wheelis ML. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci USA 1990; 87:4576-4579. PubMed doi:10.1073/pnas.87.12.4576
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 4576-4579
    • Woese, C.R.1    Kandler, O.2    Wheelis, M.L.3
  • 14
    • 0000685441 scopus 로고    scopus 로고
    • The Road Map to the Manual
    • In: Garrity GM, Boone DR, Castenholz RW, Second Edition, Springer, New York
    • Garrity GM, Holt JG. The Road Map to the Manual. In: Garrity GM, Boone DR, Castenholz RW (eds), Bergey's Manual of Systematic Bacteriology, Second Edition, Springer, New York, 2001, p. 119-169.
    • (2001) Bergey's Manual of Systematic Bacteriology , pp. 119-169
    • Garrity, G.M.1    Holt, J.G.2
  • 15
    • 0030893495 scopus 로고    scopus 로고
    • Proposal for a new hierarchic classification system, Actinobacteria classis nov
    • doi:10.1099/00207713-47-2-479
    • Stackebrandt E, Rainey FA, Ward-Rainey NL. Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 1997; 47:479-491; doi:10.1099/00207713-47-2-479.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 479-491
    • Stackebrandt, E.1    Rainey, F.A.2    Ward-Rainey, N.L.3
  • 20
    • 3142780737 scopus 로고    scopus 로고
    • Solexa Ltd. PubMed doi:10.1517/14622416.5.4.433
    • Bennett S. Pharmacogenomics 2004; 5:433-438. PubMed doi:10.1517/14622416.5.4.433
    • (2004) Solexa Ltd. Pharmacogenomics , vol.5 , pp. 433-438
    • Bennett, S.1
  • 21
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • PubMed doi:10.1101/gr.074492.107
    • Zerbino DR, Birney E. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 2008; 18:821-829. PubMed doi:10.1101/gr.074492.107
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 25
    • 69949116874 scopus 로고    scopus 로고
    • IMG ER: A system for microbial genome annotation expert review and curation
    • PubMed doi:10.1093/bioinformatics/btp393
    • Markowitz VM, Ivanova NN, Chen IMA, Chu K, Kyrpides NC. IMG ER: a system for microbial genome annotation expert review and curation. Bioinformatics 2009; 25:2271-2278. PubMed doi:10.1093/bioinformatics/btp393
    • (2009) Bioinformatics , vol.25 , pp. 2271-2278
    • Markowitz, V.M.1    Ivanova, N.N.2    Chen, I.M.A.3    Chu, K.4    Kyrpides, N.C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.