-
1
-
-
67650314596
-
-
Andrews, D.W.K., Buchinsky, M.: On the Number of Bootstrap Repetitions for Bootstrap Standard Errors, Confidence Intervals, and Tests. Cowles Foundation Paper 1141R (1997)
-
Andrews, D.W.K., Buchinsky, M.: On the Number of Bootstrap Repetitions for Bootstrap Standard Errors, Confidence Intervals, and Tests. Cowles Foundation Paper 1141R (1997)
-
-
-
-
2
-
-
0001995592
-
A Three-Step Method for Choosing the Number of Bootstrap Repetitions
-
Andrews, D.W.K., Buchinsky, M.: A Three-Step Method for Choosing the Number of Bootstrap Repetitions. Econometrica 68(1), 23-51 (2000)
-
(2000)
Econometrica
, vol.68
, Issue.1
, pp. 23-51
-
-
Andrews, D.W.K.1
Buchinsky, M.2
-
3
-
-
0012813556
-
Evaluation of a Three-step Method for Choosing the Number of Bootstrap Repetitions
-
Andrews, D.W.K., Buchinsky, M.: Evaluation of a Three-step Method for Choosing the Number of Bootstrap Repetitions. J. of Econometrics 103(1-2), 345-386 (2001)
-
(2001)
J. of Econometrics
, vol.103
, Issue.1-2
, pp. 345-386
-
-
Andrews, D.W.K.1
Buchinsky, M.2
-
4
-
-
0036021930
-
On The Number of Bootstrap Repetitions for BCa Confidence Intervals
-
Andrews, D.W.K., Buchinsky, M.: On The Number of Bootstrap Repetitions for BCa Confidence Intervals. Econometric Theory 18(4), 962-984 (2002)
-
(2002)
Econometric Theory
, vol.18
, Issue.4
, pp. 962-984
-
-
Andrews, D.W.K.1
Buchinsky, M.2
-
5
-
-
0032273615
-
General Methods for Monitoring Convergence of Iterative Simulations
-
Brooks, S.P., Gelman, A.: General Methods for Monitoring Convergence of Iterative Simulations. J. of Computational and Graphical Statistics 7(4), 434-455 (1998)
-
(1998)
J. of Computational and Graphical Statistics
, vol.7
, Issue.4
, pp. 434-455
-
-
Brooks, S.P.1
Gelman, A.2
-
7
-
-
0038040445
-
Bootstrap Tests: How Many Bootstraps?
-
Davidson, R., MacKinnon, J.G.: Bootstrap Tests: How Many Bootstraps? Econometric Reviews 19(1), 55-68 (2000)
-
(2000)
Econometric Reviews
, vol.19
, Issue.1
, pp. 55-68
-
-
Davidson, R.1
MacKinnon, J.G.2
-
9
-
-
0000461280
-
Confidence Limits on Phylogenies: An Approach Using the Bootstrap
-
Felsenstein, J.: Confidence Limits on Phylogenies: An Approach Using the Bootstrap. Evolution 39(4), 783-791 (1985)
-
(1985)
Evolution
, vol.39
, Issue.4
, pp. 783-791
-
-
Felsenstein, J.1
-
10
-
-
84972492387
-
Inference from Iterative Simulation using Multiple Sequences
-
Gelman, A., Rubin, D.B.: Inference from Iterative Simulation using Multiple Sequences. Stat. Sci. 7, 457-511 (1992)
-
(1992)
Stat. Sci
, vol.7
, pp. 457-511
-
-
Gelman, A.1
Rubin, D.B.2
-
11
-
-
34548414261
-
A Nuclear Ribosomal DNA Phylogeny of acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analyses of 606 Sequences
-
Grimm, G.W., Renner, S.S., Stamatakis, A., Hemleben, V.: A Nuclear Ribosomal DNA Phylogeny of acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analyses of 606 Sequences. Evolutionary Bioinformatics Online 2, 279-294 (2006)
-
(2006)
Evolutionary Bioinformatics Online
, vol.2
, pp. 279-294
-
-
Grimm, G.W.1
Renner, S.S.2
Stamatakis, A.3
Hemleben, V.4
-
12
-
-
0242578620
-
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
-
Guindon, S., Gascuel, O.: A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood. Sys. Biol. 52(5), 696-704 (2003)
-
(2003)
Sys. Biol
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
13
-
-
48849111904
-
Adaptive Choice of the Number of Bootstrap Samples in Large Scale Multiple Testing
-
Guo, W., Peddada, S.: Adaptive Choice of the Number of Bootstrap Samples in Large Scale Multiple Testing. Stat. Appls. in Genetics and Mol. Biol. 7(1) (2008)
-
(2008)
Stat. Appls. in Genetics and Mol. Biol
, vol.7
, Issue.1
-
-
Guo, W.1
Peddada, S.2
-
14
-
-
0001368481
-
On the Number of Bootstrap Simulations Required to Construct a Confidence Interval
-
Hall, P.: On the Number of Bootstrap Simulations Required to Construct a Confidence Interval. The Annals of Statistics 14(4), 1453-1462 (1986)
-
(1986)
The Annals of Statistics
, vol.14
, Issue.4
, pp. 1453-1462
-
-
Hall, P.1
-
15
-
-
0026562079
-
The Number of Replications Needed for Accurate Estimation of the Bootstrap P Value in Phylogenetic Studies
-
Hedges, S.B.: The Number of Replications Needed for Accurate Estimation of the Bootstrap P Value in Phylogenetic Studies. Mol. Biol. Evol. 9(2), 366-369 (1992)
-
(1992)
Mol. Biol. Evol
, vol.9
, Issue.2
, pp. 366-369
-
-
Hedges, S.B.1
-
16
-
-
22844442543
-
Analysis and Visualization of Tree Space
-
Hillis, D.M., Heath, T.A., John, K.S.: Analysis and Visualization of Tree Space. Sys. Biol. 54(3), 471-482 (2005)
-
(2005)
Sys. Biol
, vol.54
, Issue.3
, pp. 471-482
-
-
Hillis, D.M.1
Heath, T.A.2
John, K.S.3
-
17
-
-
0346271739
-
Bootstrapping Phylogenies
-
Holmes, S.: Bootstrapping Phylogenies Statistical Science, 18(2), 241-255
-
Statistical Science
, vol.18
, Issue.2
, pp. 241-255
-
-
Holmes, S.1
-
19
-
-
67650330240
-
Large-scale Phylogenetic Reconstruction
-
Brown, J.R, ed, CRC Press/Taylor & Francis
-
Moret, B.M.E.: Large-scale Phylogenetic Reconstruction. In: Brown, J.R. (ed.) Comparative Genomics: Basic and Applied Research, pp. 29-48. CRC Press/Taylor & Francis (2007)
-
(2007)
Comparative Genomics: Basic and Applied Research
, pp. 29-48
-
-
Moret, B.M.E.1
-
20
-
-
33846880861
-
Limitations of Markov Chain Monte Carlo Algorithms for Bayesian Inference of Phylogeny
-
Mossel, E., Vigoda, E.: Limitations of Markov Chain Monte Carlo Algorithms for Bayesian Inference of Phylogeny. Ann. Appl. Probab. 16(4), 2215-2234 (2006)
-
(2006)
Ann. Appl. Probab
, vol.16
, Issue.4
, pp. 2215-2234
-
-
Mossel, E.1
Vigoda, E.2
-
21
-
-
67650327035
-
-
Nylander, J.A.A., Wilgenbusch, J.C., Warren, D.L., Swofford, D.L.: AWTY (are we there yet?): A System for Graphical Exploration of MCMC Convergence in Bayesian Phylogenetics. Bioinformatics (2007) (advance access, published August 30)
-
Nylander, J.A.A., Wilgenbusch, J.C., Warren, D.L., Swofford, D.L.: AWTY (are we there yet?): A System for Graphical Exploration of MCMC Convergence in Bayesian Phylogenetics. Bioinformatics (2007) (advance access, published August 30)
-
-
-
-
22
-
-
34547685868
-
Efficiently Computing the Robinson-Foulds Metric
-
Pattengale, N.D., Gottlieb, E.J., Moret, B.M.E.: Efficiently Computing the Robinson-Foulds Metric. J. of Computational Biology 14(6), 724-735 (2007)
-
(2007)
J. of Computational Biology
, vol.14
, Issue.6
, pp. 724-735
-
-
Pattengale, N.D.1
Gottlieb, E.J.2
Moret, B.M.E.3
-
23
-
-
67650324085
-
-
Rambaut, A, Drummond, A, Tracer MCMC Trace Analysis Tool version 1.3 2004
-
Rambaut, A., Drummond, A.: Tracer MCMC Trace Analysis Tool version 1.3 (2004)
-
-
-
-
25
-
-
0019424782
-
Comparison of Phylogenetic Trees
-
Robinson, D.F., Foulds, L.R.: Comparison of Phylogenetic Trees. Math. Biosc. 53(1), 131-147 (1981)
-
(1981)
Math. Biosc
, vol.53
, Issue.1
, pp. 131-147
-
-
Robinson, D.F.1
Foulds, L.R.2
-
26
-
-
0041386108
-
MrBayes 3: Bayesian Phylogenetic Inference under Mixed Models
-
Ronquist, F., Huelsenbeck, J.P.: MrBayes 3: Bayesian Phylogenetic Inference under Mixed Models. Bioinformatics 19(12), 1572-1574 (2003)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
27
-
-
33847240958
-
A 567-taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets. Int'l
-
Soltis, D.E., Gitzendanner, M.A., Soltis, P.S.: A 567-taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets. Int'l J. Plant Sci. 168(2), 137-157 (2007)
-
(2007)
J. Plant Sci
, vol.168
, Issue.2
, pp. 137-157
-
-
Soltis, D.E.1
Gitzendanner, M.A.2
Soltis, P.S.3
-
28
-
-
0347532847
-
Applying the Bootstrap in Phylogeny Reconstruction
-
Soltis, D.E., Soltis, P.S.: Applying the Bootstrap in Phylogeny Reconstruction. Statist. Sci. 18(2), 256-267 (2003)
-
(2003)
Statist. Sci
, vol.18
, Issue.2
, pp. 256-267
-
-
Soltis, D.E.1
Soltis, P.S.2
-
29
-
-
33750403801
-
RAxML-VI-HPC: Maximum Likelihood-based Phylogenetic Analyses with Thousands of Taxa and Mixed Models
-
Stamatakis, A.: RAxML-VI-HPC: Maximum Likelihood-based Phylogenetic Analyses with Thousands of Taxa and Mixed Models. Bioinformatics 22(21), 2688-2690 (2006)
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
30
-
-
50249100595
-
A Rapid Bootstrap Algorithm for the RAxML Web Servers
-
in press
-
Stamatakis, A., Hoover, P., Rougemont, J.: A Rapid Bootstrap Algorithm for the RAxML Web Servers. Sys. Biol. (2008) (in press)
-
(2008)
Sys. Biol
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
31
-
-
12444334567
-
New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees
-
Santa Fe, New Mexico
-
Stamatakis, A., Meier, H., Ludwig, T.: New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees. In: Proc. of IPDPS 2004, HICOMB Workshop, Proceedings on CD, Santa Fe, New Mexico (2004)
-
(2004)
Proc. of IPDPS 2004, HICOMB Workshop, Proceedings on CD
-
-
Stamatakis, A.1
Meier, H.2
Ludwig, T.3
-
32
-
-
34548633617
-
New Approaches to Phylogenetic Tree Search and Their Application to Large Numbers of Protein Alignments
-
Whelan, S.: New Approaches to Phylogenetic Tree Search and Their Application to Large Numbers of Protein Alignments. Sys. Biol. 56(5), 727-740 (2007)
-
(2007)
Sys. Biol
, vol.56
, Issue.5
, pp. 727-740
-
-
Whelan, S.1
|