-
1
-
-
0029812154
-
hnRNP A1 binds promiscuously to oligoribonucleotides: utilization of random and homo-oligonucleotides to discriminate sequence from base-specific binding
-
Abdul-Manan N, Williams KR. 1996. hnRNP A1 binds promiscuously to oligoribonucleotides: utilization of random and homo-oligonucleotides to discriminate sequence from base-specific binding. Nucleic Acids Res 24:4063-4070.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4063-4070
-
-
Abdul-Manan, N.1
Williams, K.R.2
-
2
-
-
0036948420
-
Allosteric cascade of spliceosome activation
-
Brow DA. 2002. Allosteric cascade of spliceosome activation. Annu Rev Genet 36:333-360.
-
(2002)
Annu Rev Genet
, vol.36
, pp. 333-360
-
-
Brow, D.A.1
-
3
-
-
0028215301
-
RNA binding specificity of hnRNP A1: significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing
-
Burd CG, Dreyfuss G. 1994. RNA binding specificity of hnRNP A1: significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing. EMBO J 13:1197-1204.
-
(1994)
EMBO J
, vol.13
, pp. 1197-1204
-
-
Burd, C.G.1
Dreyfuss, G.2
-
4
-
-
61749099937
-
Regulation of SMN protein stability
-
Burnett BG, Munoz E, Tandon A, Kwon DY, Sumner CJ, Fischbeck KH. 2009. Regulation of SMN protein stability. Mol Cell Biol 29:1107-1115.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 1107-1115
-
-
Burnett, B.G.1
Munoz, E.2
Tandon, A.3
Kwon, D.Y.4
Sumner, C.J.5
Fischbeck, K.H.6
-
5
-
-
34447642872
-
Abnormal motor phenotype in the SMNDelta7 mouse model of spinal muscular atrophy
-
Butchbach ME, Edwards JD, Burghes AH. 2007. Abnormal motor phenotype in the SMNDelta7 mouse model of spinal muscular atrophy. Neurobiol Dis 27:207-219.
-
(2007)
Neurobiol Dis
, vol.27
, pp. 207-219
-
-
Butchbach, M.E.1
Edwards, J.D.2
Burghes, A.H.3
-
6
-
-
0025086045
-
Recombinant hnRNP protein A1 and its N-terminal domain show preferential affinity for oligodeoxynucleotides homologous to intron/exon acceptor sites
-
Buvoli M, Cobianchi F, Biamonti G, Riva S. 1990. Recombinant hnRNP protein A1 and its N-terminal domain show preferential affinity for oligodeoxynucleotides homologous to intron/exon acceptor sites. Nucleic Acids Res 18:6595-6600.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6595-6600
-
-
Buvoli, M.1
Cobianchi, F.2
Biamonti, G.3
Riva, S.4
-
7
-
-
0035941211
-
Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H'/F/2H9 family
-
Caputi M, Zahler AM. 2001. Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H'/F/2H9 family. J Biol Chem 276:43850-43859.
-
(2001)
J Biol Chem
, vol.276
, pp. 43850-43859
-
-
Caputi, M.1
Zahler, A.M.2
-
8
-
-
0036207384
-
Listening to silence and understanding nonsense: exonic mutations that affect splicing
-
Cartegni L, Chew SL, Krainer AR. 2002. Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nat Rev Genet 3:285-298.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 285-298
-
-
Cartegni, L.1
Chew, S.L.2
Krainer, A.R.3
-
9
-
-
29244490598
-
Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2
-
Cartegni L, Hastings ML, Calarco JA, de Stanchina E, Krainer AR. 2006. Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2. Am J Hum Genet 78:63-77.
-
(2006)
Am J Hum Genet
, vol.78
, pp. 63-77
-
-
Cartegni, L.1
Hastings, M.L.2
Calarco, J.A.3
de Stanchina, E.4
Krainer, A.R.5
-
10
-
-
0042242582
-
ESEfinder: A web resource to identify exonic splicing enhancers
-
Cartegni L, Wang J, Zhu Z, Zhang MQ, Krainer AR. 2003. ESEfinder: A web resource to identify exonic splicing enhancers. Nucleic Acids Res 31:3568-3571.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3568-3571
-
-
Cartegni, L.1
Wang, J.2
Zhu, Z.3
Zhang, M.Q.4
Krainer, A.R.5
-
11
-
-
77649114471
-
A degron created by SMN2 exon 7 skipping is a principal contributor to spinal muscular atrophy severity
-
Cho S, Dreyfuss G. 2010. A degron created by SMN2 exon 7 skipping is a principal contributor to spinal muscular atrophy severity. Genes Dev 24:438-442.
-
(2010)
Genes Dev
, vol.24
, pp. 438-442
-
-
Cho, S.1
Dreyfuss, G.2
-
12
-
-
0030988942
-
Identification of a new class of exonic splicing enhancers by in vivo selection
-
Coulter LR, Landree MA, Cooper TA. 1997. Identification of a new class of exonic splicing enhancers by in vivo selection. Mol Cell Biol 17:2143-2150.
-
(1997)
Mol Cell Biol
, vol.17
, pp. 2143-2150
-
-
Coulter, L.R.1
Landree, M.A.2
Cooper, T.A.3
-
13
-
-
0030130574
-
The neurobiology of childhood spinal muscular atrophy
-
Crawford TO, Pardo CA. 1996. The neurobiology of childhood spinal muscular atrophy. Neurobiol Dis 3:97-110.
-
(1996)
Neurobiol Dis
, vol.3
, pp. 97-110
-
-
Crawford, T.O.1
Pardo, C.A.2
-
14
-
-
66249120367
-
Human Splicing Finder: an online bioinformatics tool to predict splicing signals
-
Desmet FO, Hamroun D, Lalande M, Collod-Beroud G, Claustres M, Beroud C. 2009. Human Splicing Finder: an online bioinformatics tool to predict splicing signals. Nucleic Acids Res 37:e67.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Desmet, F.O.1
Hamroun, D.2
Lalande, M.3
Collod-Beroud, G.4
Claustres, M.5
Beroud, C.6
-
15
-
-
77954656632
-
The phenylalanine hydroxylase c.30C>G synonymous variation (p.G10G) creates a common exonic splicing silencer
-
Dobrowolski SF, Andersen HS, Doktor TK, Andresen BS. 2010. The phenylalanine hydroxylase c.30C>G synonymous variation (p.G10G) creates a common exonic splicing silencer. Mol Genet Metab 100:316-323.
-
(2010)
Mol Genet Metab
, vol.100
, pp. 316-323
-
-
Dobrowolski, S.F.1
Andersen, H.S.2
Doktor, T.K.3
Andresen, B.S.4
-
16
-
-
0242637344
-
Human immunodeficiency virus type 1 hnRNP A/B-dependent exonic splicing silencer ESSV antagonizes binding of U2AF65 to viral polypyrimidine tracts
-
Domsic JK, Wang Y, Mayeda A, Krainer AR, Stoltzfus CM. 2003. Human immunodeficiency virus type 1 hnRNP A/B-dependent exonic splicing silencer ESSV antagonizes binding of U2AF65 to viral polypyrimidine tracts. Mol Cell Biol 23:8762-8772.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 8762-8772
-
-
Domsic, J.K.1
Wang, Y.2
Mayeda, A.3
Krainer, A.R.4
Stoltzfus, C.M.5
-
17
-
-
0036154959
-
Quantitative analyses of SMN1 and SMN2 based on real-time lightCycler PCR: fast and highly reliable carrier testing and prediction of severity of spinal muscular atrophy
-
Feldkotter M, Schwarzer V, Wirth R, Wienker TF, Wirth B. 2002. Quantitative analyses of SMN1 and SMN2 based on real-time lightCycler PCR: fast and highly reliable carrier testing and prediction of severity of spinal muscular atrophy. Am J Hum Genet 70:358-368.
-
(2002)
Am J Hum Genet
, vol.70
, pp. 358-368
-
-
Feldkotter, M.1
Schwarzer, V.2
Wirth, R.3
Wienker, T.F.4
Wirth, B.5
-
18
-
-
0034743627
-
The role of U2AF35 and U2AF65 in enhancer-dependent splicing
-
Graveley BR, Hertel KJ, Maniatis T. 2001. The role of U2AF35 and U2AF65 in enhancer-dependent splicing. RNA 7:806-818.
-
(2001)
RNA
, vol.7
, pp. 806-818
-
-
Graveley, B.R.1
Hertel, K.J.2
Maniatis, T.3
-
19
-
-
43049159563
-
Decreased expression of the mitochondrial matrix proteases Lon and ClpP in cells from a patient with hereditary spastic paraplegia (SPG13)
-
Hansen J, Corydon TJ, Palmfeldt J, Durr A, Fontaine B, Nielsen MN, Christensen JH, Gregersen N, Bross P. 2008. Decreased expression of the mitochondrial matrix proteases Lon and ClpP in cells from a patient with hereditary spastic paraplegia (SPG13). Neuroscience 153:474-482.
-
(2008)
Neuroscience
, vol.153
, pp. 474-482
-
-
Hansen, J.1
Corydon, T.J.2
Palmfeldt, J.3
Durr, A.4
Fontaine, B.5
Nielsen, M.N.6
Christensen, J.H.7
Gregersen, N.8
Bross, P.9
-
20
-
-
39149083341
-
Control of pre-mRNA splicing by the general splicing factors PUF60 and U2AF65
-
Hastings ML, Allemand E, Duelli DM, Myers MP, Krainer AR. 2007. Control of pre-mRNA splicing by the general splicing factors PUF60 and U2AF65. PLoS ONE 2:e538.
-
(2007)
PLoS ONE
, vol.2
-
-
Hastings, M.L.1
Allemand, E.2
Duelli, D.M.3
Myers, M.P.4
Krainer, A.R.5
-
21
-
-
77955894067
-
Antisense correction of SMN2 splicing in the CNS rescues necrosis in a type III SMA mouse model
-
Hua Y, Sahashi K, Hung G, Rigo F, Passini MA, Bennett CF, Krainer AR. 2010. Antisense correction of SMN2 splicing in the CNS rescues necrosis in a type III SMA mouse model. Genes Dev 24:1634-1644.
-
(2010)
Genes Dev
, vol.24
, pp. 1634-1644
-
-
Hua, Y.1
Sahashi, K.2
Hung, G.3
Rigo, F.4
Passini, M.A.5
Bennett, C.F.6
Krainer, A.R.7
-
22
-
-
34247388843
-
Enhancement of SMN2 exon 7 inclusion by antisense oligonucleotides targeting the exon
-
Hua Y, Vickers TA, Baker BF, Bennett CF, Krainer AR. 2007. Enhancement of SMN2 exon 7 inclusion by antisense oligonucleotides targeting the exon. PLoS Biol 5:e73.
-
(2007)
PLoS Biol
, vol.5
-
-
Hua, Y.1
Vickers, T.A.2
Baker, B.F.3
Bennett, C.F.4
Krainer, A.R.5
-
23
-
-
41549168514
-
Antisense masking of an hnRNP A1/A2 intronic splicing silencer corrects SMN2 splicing in transgenic mice
-
Hua Y, Vickers TA, Okunola HL, Bennett CF, Krainer AR. 2008. Antisense masking of an hnRNP A1/A2 intronic splicing silencer corrects SMN2 splicing in transgenic mice. Am J Hum Genet 82:834-848.
-
(2008)
Am J Hum Genet
, vol.82
, pp. 834-848
-
-
Hua, Y.1
Vickers, T.A.2
Okunola, H.L.3
Bennett, C.F.4
Krainer, A.R.5
-
24
-
-
0347755531
-
The UCSC Table Browser data retrieval tool
-
Karolchik D, Hinrichs AS, Furey TS, Roskin KM, Sugnet CW, Haussler D, Kent WJ. 2004. The UCSC Table Browser data retrieval tool. Nucleic Acids Res 32:D493-D496.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Karolchik, D.1
Hinrichs, A.S.2
Furey, T.S.3
Roskin, K.M.4
Sugnet, C.W.5
Haussler, D.6
Kent, W.J.7
-
25
-
-
0041665176
-
A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy
-
Kashima T, Manley JL. 2003. A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy. Nat Genet 34:460-463.
-
(2003)
Nat Genet
, vol.34
, pp. 460-463
-
-
Kashima, T.1
Manley, J.L.2
-
26
-
-
36248987806
-
hnRNP A1 functions with specificity in repression of SMN2 exon 7 splicing
-
Kashima T, Rao N, David CJ, Manley JL. 2007a. hnRNP A1 functions with specificity in repression of SMN2 exon 7 splicing. Hum Mol Genet 16:3149-3159.
-
(2007)
Hum Mol Genet
, vol.16
, pp. 3149-3159
-
-
Kashima, T.1
Rao, N.2
David, C.J.3
Manley, J.L.4
-
27
-
-
33847665554
-
An intronic element contributes to splicing repression in spinal muscular atrophy
-
Kashima T, Rao N, Manley JL. 2007b. An intronic element contributes to splicing repression in spinal muscular atrophy. Proc Natl Acad Sci USA 104:3426-3431.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 3426-3431
-
-
Kashima, T.1
Rao, N.2
Manley, J.L.3
-
28
-
-
11144331491
-
Characterization of a U2AF-independent commitment complex (E') in the mammalian spliceosome assembly pathway
-
Kent OA, Ritchie DB, Macmillan AM. 2005. Characterization of a U2AF-independent commitment complex (E') in the mammalian spliceosome assembly pathway. Mol Cell Biol 25:233-240.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 233-240
-
-
Kent, O.A.1
Ritchie, D.B.2
Macmillan, A.M.3
-
29
-
-
0345791524
-
Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease
-
Kikuchi M, Hatano N, Yokota S, Shimozawa N, Imanaka T, Taniguchi H. 2004. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. J Biol Chem 279:421-428.
-
(2004)
J Biol Chem
, vol.279
, pp. 421-428
-
-
Kikuchi, M.1
Hatano, N.2
Yokota, S.3
Shimozawa, N.4
Imanaka, T.5
Taniguchi, H.6
-
30
-
-
20144385587
-
SMNDelta7, the major product of the centromeric survival motor neuron (SMN2) gene, extends survival in mice with spinal muscular atrophy and associates with full-length SMN
-
Le TT, Pham LT, Butchbach ME, Zhang HL, Monani UR, Coovert DD, Gavrilina TO, Xing L, Bassell GJ, Burghes AH. 2005. SMNDelta7, the major product of the centromeric survival motor neuron (SMN2) gene, extends survival in mice with spinal muscular atrophy and associates with full-length SMN. Hum Mol Genet 14:845-857.
-
(2005)
Hum Mol Genet
, vol.14
, pp. 845-857
-
-
Le, T.T.1
Pham, L.T.2
Butchbach, M.E.3
Zhang, H.L.4
Monani, U.R.5
Coovert, D.D.6
Gavrilina, T.O.7
Xing, L.8
Bassell, G.J.9
Burghes, A.H.10
-
31
-
-
0028797783
-
Identification and characterization of a spinal muscular atrophy-determining gene
-
Lefebvre S, Burglen L, Reboullet S, Clermont O, Burlet P, Viollet L, Benichou B, Cruaud C, Millasseau P, Zeviani M, Le Paslier D, Frézal J, Cohen D, Weissenbach J, Munnich A, Melki J. 1995. Identification and characterization of a spinal muscular atrophy-determining gene. Cell 80:155-165.
-
(1995)
Cell
, vol.80
, pp. 155-165
-
-
Lefebvre, S.1
Burglen, L.2
Reboullet, S.3
Clermont, O.4
Burlet, P.5
Viollet, L.6
Benichou, B.7
Cruaud, C.8
Millasseau, P.9
Zeviani, M.10
Le Paslier, D.11
Frézal, J.12
Cohen, D.13
Weissenbach, J.14
Munnich, A.15
Melki, J.16
-
32
-
-
0030981541
-
Correlation between severity and SMN protein level in spinal muscular atrophy
-
Lefebvre S, Burlet P, Liu Q, Bertrandy S, Clermont O, Munnich A, Dreyfuss G, Melki J. 1997. Correlation between severity and SMN protein level in spinal muscular atrophy. Nat Genet 16:265-269.
-
(1997)
Nat Genet
, vol.16
, pp. 265-269
-
-
Lefebvre, S.1
Burlet, P.2
Liu, Q.3
Bertrandy, S.4
Clermont, O.5
Munnich, A.6
Dreyfuss, G.7
Melki, J.8
-
33
-
-
33846577682
-
The reduced expression of the HADH2 protein causes X-linked mental retardation, choreoathetosis, and abnormal behavior
-
Lenski C, Kooy RF, Reyniers E, Loessner D, Wanders RJ, Winnepenninckx B, Hellebrand H, Engert S, Schwartz CE, Meindl A, Ramser J. 2007. The reduced expression of the HADH2 protein causes X-linked mental retardation, choreoathetosis, and abnormal behavior. Am J Hum Genet 80:372-377.
-
(2007)
Am J Hum Genet
, vol.80
, pp. 372-377
-
-
Lenski, C.1
Kooy, R.F.2
Reyniers, E.3
Loessner, D.4
Wanders, R.J.5
Winnepenninckx, B.6
Hellebrand, H.7
Engert, S.8
Schwartz, C.E.9
Meindl, A.10
Ramser, J.11
-
34
-
-
0033983258
-
An exonic enhancer is required for inclusion of an essential exon in the SMA-determining gene SMN
-
Lorson CL, Androphy EJ. 2000. An exonic enhancer is required for inclusion of an essential exon in the SMA-determining gene SMN. Hum Mol Genet 9:259-265.
-
(2000)
Hum Mol Genet
, vol.9
, pp. 259-265
-
-
Lorson, C.L.1
Androphy, E.J.2
-
35
-
-
62549087007
-
Differential 3' splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP
-
Martins de Araujo M, Bonnal S, Hastings ML, Krainer AR, Valcarcel J. 2009. Differential 3' splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP. RNA 15:515-523.
-
(2009)
RNA
, vol.15
, pp. 515-523
-
-
Martins de Araujo, M.1
Bonnal, S.2
Hastings, M.L.3
Krainer, A.R.4
Valcarcel, J.5
-
36
-
-
57149106806
-
hnRNP H enhances skipping of a nonfunctional exon P3A in CHRNA1 and a mutation disrupting its binding causes congenital myasthenic syndrome
-
Masuda A, Shen XM, Ito M, Matsuura T, Engel AG, Ohno K. 2008. hnRNP H enhances skipping of a nonfunctional exon P3A in CHRNA1 and a mutation disrupting its binding causes congenital myasthenic syndrome. Hum Mol Genet 17:4022-4035.
-
(2008)
Hum Mol Genet
, vol.17
, pp. 4022-4035
-
-
Masuda, A.1
Shen, X.M.2
Ito, M.3
Matsuura, T.4
Engel, A.G.5
Ohno, K.6
-
37
-
-
0027151934
-
Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF
-
Mayeda A, Helfman DM, Krainer AR. 1993. Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF. Mol Cell Biol 13:2993-3001.
-
(1993)
Mol Cell Biol
, vol.13
, pp. 2993-3001
-
-
Mayeda, A.1
Helfman, D.M.2
Krainer, A.R.3
-
38
-
-
0033576625
-
Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG
-
Merendino L, Guth S, Bilbao D, Martinez C, Valcarcel J. 1999. Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG. Nature 402:838-841.
-
(1999)
Nature
, vol.402
, pp. 838-841
-
-
Merendino, L.1
Guth, S.2
Bilbao, D.3
Martinez, C.4
Valcarcel, J.5
-
39
-
-
0032799998
-
A single nucleotide difference that alters splicing patterns distinguishes the SMA gene SMN1 from the copy gene SMN2
-
Monani UR, Lorson CL, Parsons DW, Prior TW, Androphy EJ, Burghes AH, McPherson JD. 1999. A single nucleotide difference that alters splicing patterns distinguishes the SMA gene SMN1 from the copy gene SMN2. Hum Mol Genet 8:1177-1183.
-
(1999)
Hum Mol Genet
, vol.8
, pp. 1177-1183
-
-
Monani, U.R.1
Lorson, C.L.2
Parsons, D.W.3
Prior, T.W.4
Androphy, E.J.5
Burghes, A.H.6
McPherson, J.D.7
-
40
-
-
33847241832
-
Seemingly neutral polymorphic variants may confer immunity to splicing-inactivating mutations: a synonymous SNP in exon 5 of MCAD protects from deleterious mutations in a flanking exonic splicing enhancer
-
Nielsen KB, Sorensen S, Cartegni L, Corydon TJ, Doktor TK, Schroeder LD, Reinert LS, Elpeleg O, Krainer AR, Gregersen N, Kjems J, Andresen BS. 2007. Seemingly neutral polymorphic variants may confer immunity to splicing-inactivating mutations: a synonymous SNP in exon 5 of MCAD protects from deleterious mutations in a flanking exonic splicing enhancer. Am J Hum Genet 80:416-432.
-
(2007)
Am J Hum Genet
, vol.80
, pp. 416-432
-
-
Nielsen, K.B.1
Sorensen, S.2
Cartegni, L.3
Corydon, T.J.4
Doktor, T.K.5
Schroeder, L.D.6
Reinert, L.S.7
Elpeleg, O.8
Krainer, A.R.9
Gregersen, N.10
Kjems, J.11
Andresen, B.S.12
-
41
-
-
70350433635
-
Cooperative-binding and splicing-repressive properties of hnRNP A1
-
Okunola HL, Krainer AR. 2009. Cooperative-binding and splicing-repressive properties of hnRNP A1. Mol Cell Biol 29:5620-5631.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 5620-5631
-
-
Okunola, H.L.1
Krainer, A.R.2
-
42
-
-
77950524790
-
The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy
-
Pedrotti S, Bielli P, Paronetto MP, Ciccosanti F, Fimia GM, Stamm S, Manley JL, Sette C. 2010. The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy. EMBO J 29:1235-1247.
-
(2010)
EMBO J
, vol.29
, pp. 1235-1247
-
-
Pedrotti, S.1
Bielli, P.2
Paronetto, M.P.3
Ciccosanti, F.4
Fimia, G.M.5
Stamm, S.6
Manley, J.L.7
Sette, C.8
-
43
-
-
77951770756
-
BEDTools: a flexible suite of utilities for comparing genomic features
-
Quinlan AR, Hall IM. 2010. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26:841-842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
45
-
-
75549089967
-
The UCSC Genome Browser database: update 2010
-
Rhead B, Karolchik D, Kuhn RM, Hinrichs AS, Zweig AS, Fujita PA, Diekhans M, Smith KE, Rosenbloom KR, Raney BJ, Pohl A, Pheasant M, Meyer LR, Learned K, Hsu F, Hillman-Jackson J, Harte RA, Giardine B, Dreszer TR, Clawson H, Barber GP, Haussler D, Kent WJ. 2010. The UCSC Genome Browser database: update 2010. Nucleic Acids Res 38:D613-D619.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Rhead, B.1
Karolchik, D.2
Kuhn, R.M.3
Hinrichs, A.S.4
Zweig, A.S.5
Fujita, P.A.6
Diekhans, M.7
Smith, K.E.8
Rosenbloom, K.R.9
Raney, B.J.10
Pohl, A.11
Pheasant, M.12
Meyer, L.R.13
Learned, K.14
Hsu, F.15
Hillman-Jackson, J.16
Harte, R.A.17
Giardine, B.18
Dreszer, T.R.19
Clawson, H.20
Barber, G.P.21
Haussler, D.22
Kent, W.J.23
more..
-
46
-
-
0025325983
-
The "megaprimer" method of site-directed mutagenesis
-
Sarkar G, Sommer SS. 1990. The "megaprimer" method of site-directed mutagenesis. Biotechniques 8:404-407.
-
(1990)
Biotechniques
, vol.8
, pp. 404-407
-
-
Sarkar, G.1
Sommer, S.S.2
-
47
-
-
34250313662
-
Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes
-
Schaub MC, Lopez SR, Caputi M. 2007. Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes. J Biol Chem 282:13617-13626.
-
(2007)
J Biol Chem
, vol.282
, pp. 13617-13626
-
-
Schaub, M.C.1
Lopez, S.R.2
Caputi, M.3
-
48
-
-
33748581324
-
Comprehensive splice-site analysis using comparative genomics
-
Sheth N, Roca X, Hastings ML, Roeder T, Krainer AR, Sachidanandam R. 2006. Comprehensive splice-site analysis using comparative genomics. Nucleic Acids Res 34:3955-3967.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3955-3967
-
-
Sheth, N.1
Roca, X.2
Hastings, M.L.3
Roeder, T.4
Krainer, A.R.5
Sachidanandam, R.6
-
49
-
-
0842289003
-
An extended inhibitory context causes skipping of exon 7 of SMN2 in spinal muscular atrophy
-
Singh NN, Androphy EJ, Singh RN. 2004. An extended inhibitory context causes skipping of exon 7 of SMN2 in spinal muscular atrophy. Biochem Biophys Res Commun 315:381-388.
-
(2004)
Biochem Biophys Res Commun
, vol.315
, pp. 381-388
-
-
Singh, N.N.1
Androphy, E.J.2
Singh, R.N.3
-
50
-
-
0024009108
-
Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities
-
Swanson MS, Dreyfuss G. 1988a. Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities. Mol Cell Biol 8:2237-2241.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 2237-2241
-
-
Swanson, M.S.1
Dreyfuss, G.2
-
51
-
-
0024117031
-
RNA binding specificity of hnRNP proteins: a subset bind to the 3' end of introns
-
Swanson MS, Dreyfuss G. 1988b. RNA binding specificity of hnRNP proteins: a subset bind to the 3' end of introns. EMBO J 7:3519-3529.
-
(1988)
EMBO J
, vol.7
, pp. 3519-3529
-
-
Swanson, M.S.1
Dreyfuss, G.2
-
52
-
-
0030047445
-
Molecular analysis of the SMN and NAIP genes in Spanish spinal muscular atrophy (SMA) families and correlation between number of copies of cBCD541 and SMA phenotype
-
Velasco E, Valero C, Valero A, Moreno F, Hernandez-Chico C. 1996. Molecular analysis of the SMN and NAIP genes in Spanish spinal muscular atrophy (SMA) families and correlation between number of copies of cBCD541 and SMA phenotype. Hum Mol Genet 5:257-263.
-
(1996)
Hum Mol Genet
, vol.5
, pp. 257-263
-
-
Velasco, E.1
Valero, C.2
Valero, A.3
Moreno, F.4
Hernandez-Chico, C.5
-
53
-
-
67249165478
-
The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing
-
Warf MB, Diegel JV, von Hippel PH, Berglund JA. 2009. The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing. Proc Natl Acad Sci USA 106:9203-9208.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 9203-9208
-
-
Warf, M.B.1
Diegel, J.V.2
von Hippel, P.H.3
Berglund, J.A.4
-
54
-
-
0033358719
-
Quantitative analysis of survival motor neuron copies: identification of subtle SMN1 mutations in patients with spinal muscular atrophy, genotype-phenotype correlation, and implications for genetic counseling
-
Wirth B, Herz M, Wetter A, Moskau S, Hahnen E, Rudnik-Schoneborn S, Wienker T, Zerres K. 1999. Quantitative analysis of survival motor neuron copies: identification of subtle SMN1 mutations in patients with spinal muscular atrophy, genotype-phenotype correlation, and implications for genetic counseling. Am J Hum Genet 64:1340-1356.
-
(1999)
Am J Hum Genet
, vol.64
, pp. 1340-1356
-
-
Wirth, B.1
Herz, M.2
Wetter, A.3
Moskau, S.4
Hahnen, E.5
Rudnik-Schoneborn, S.6
Wienker, T.7
Zerres, K.8
-
55
-
-
0027137934
-
Specific interactions between proteins implicated in splice site selection and regulated alternative splicing
-
Wu JY, Maniatis T. 1993. Specific interactions between proteins implicated in splice site selection and regulated alternative splicing. Cell 75:1061-1070.
-
(1993)
Cell
, vol.75
, pp. 1061-1070
-
-
Wu, J.Y.1
Maniatis, T.2
-
56
-
-
0033576626
-
Functional recognition of the 3' splice site AG by the splicing factor U2AF35
-
Wu S, Romfo CM, Nilsen TW, Green MR. 1999. Functional recognition of the 3' splice site AG by the splicing factor U2AF35. Nature 402:832-835.
-
(1999)
Nature
, vol.402
, pp. 832-835
-
-
Wu, S.1
Romfo, C.M.2
Nilsen, T.W.3
Green, M.R.4
-
57
-
-
2442441507
-
Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
-
Yeo G, Burge CB. 2004. Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals. J Comput Biol 11:377-394.
-
(2004)
J Comput Biol
, vol.11
, pp. 377-394
-
-
Yeo, G.1
Burge, C.B.2
-
58
-
-
0026569967
-
Cloning and domain structure of the mammalian splicing factor U2AF
-
Zamore PD, Patton JG, Green MR. 1992. Cloning and domain structure of the mammalian splicing factor U2AF. Nature 355:609-614.
-
(1992)
Nature
, vol.355
, pp. 609-614
-
-
Zamore, P.D.1
Patton, J.G.2
Green, M.R.3
-
59
-
-
10844221615
-
Disruption of exonic splicing enhancer elements is the principal cause of exon skipping associated with seven nonsense or missense alleles of NF1
-
Zatkova A, Messiaen L, Vandenbroucke I, Wieser R, Fonatsch C, Krainer AR, Wimmer K. 2004. Disruption of exonic splicing enhancer elements is the principal cause of exon skipping associated with seven nonsense or missense alleles of NF1. Hum Mutat 24:491-501.
-
(2004)
Hum Mutat
, vol.24
, pp. 491-501
-
-
Zatkova, A.1
Messiaen, L.2
Vandenbroucke, I.3
Wieser, R.4
Fonatsch, C.5
Krainer, A.R.6
Wimmer, K.7
-
60
-
-
0026649523
-
Cloning and intracellular localization of the U2 small nuclear ribonucleoprotein auxiliary factor small subunit
-
Zhang M, Zamore PD, Carmo-Fonseca M, Lamond AI, Green MR. 1992. Cloning and intracellular localization of the U2 small nuclear ribonucleoprotein auxiliary factor small subunit. Proc Natl Acad Sci USA 89:8769-8773.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 8769-8773
-
-
Zhang, M.1
Zamore, P.D.2
Carmo-Fonseca, M.3
Lamond, A.I.4
Green, M.R.5
|