NFAT and IRF proteins regulate transcription of the anti-HIV gene, APOBEC3G

Journal of Biological Chemistry

Volumn 286, Issue 4, 2011, Pages 2567-2577

  Farrow, Melissa A ^a   Kim, Eun Young ^b   Wolinsky, Steven M ^b   Sheehy, Ann M ^a  

^a Department of Biology   (United States)

^b NORTHWESTERN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTI-HIV; CELL TYPES; CORE PROMOTERS; CYTIDINE DEAMINASE; GENE REGULATIONS; HUMAN IMMUNODEFICIENCY VIRUS; IN-CELL; INDIVIDUAL FACTORS; INNATE IMMUNE RESPONSE; IRF PROTEINS; PROMOTER ACTIVITIES; THERAPEUTIC INTERVENTION; TRANSCRIPTIONAL CONTROL MECHANISM; TRANSCRIPTIONAL REGULATION;

DISEASES; TRANSCRIPTION; VIRUSES;

GENE EXPRESSION REGULATION;

INTERFERON REGULATORY FACTOR 4; TRANSCRIPTION FACTOR NFAT; TRANSCRIPTION FACTOR NFAT1; TRANSCRIPTION FACTOR NFAT2; UNCLASSIFIED DRUG;

APOBEC3G GENE; ARTICLE; BINDING SITE; CELL TYPE; CONTROLLED STUDY; GENE; GENE CONTROL; GENE EXPRESSION; GENETIC TRANSFECTION; HELA CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; INNATE IMMUNITY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; TRANSCRIPTION INITIATION SITE; TRANSCRIPTION REGULATION;

CYTIDINE DEAMINASE; GENE EXPRESSION REGULATION, ENZYMOLOGIC; HELA CELLS; HIV-1; HUMANS; IMMUNITY, INNATE; INTERFERON REGULATORY FACTORS; NFATC TRANSCRIPTION FACTORS; RESPONSE ELEMENTS; TRANSCRIPTION, GENETIC; VIRUS REPLICATION;

HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 78951473630     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.154377     Document Type: Article

References (47)

1. Sheehy, A. M., Gaddis, N. C., Choi, J. D., and Malim, M. H. (2002) Nature 418, 646-650
2. Guo, F., Cen, S., Niu, M., Saadatmand, J., and Kleiman, L. (2006) J. Virol. 80, 11710-11722
3. Bishop, K. N., Verma, M., Kim, E. Y., Wolinsky, S. M., and Malim, M. H. (2008) PLoS Pathog. 4, e1000231
4. Harris, R. S., Bishop, K. N., Sheehy, A. M., Craig, H. M., Petersen-Mahrt, S. K., Watt, I. N., Neuberger, M. S., and Malim, M. H. (2003) Cell 113, 803-809
5. Lecossier, D., Bouchonnet, F., Clavel, F., and Hance, A. J. (2003) Science 300, 1112
6. Mangeat, B., Turelli, P., Caron, G., Friedli, M., Perrin, L., and Trono, D. (2003) Nature 424, 99-103
7. Zhang, H., Yang, B., Pomerantz, R. J., Zhang, C., Arunachalam, S. C., and Gao, L. (2003) Nature 424, 94-98
8. Marin, M., Rose, K. M., Kozak, S. L., and Kabat, D. (2003) Nat. Med. 9, 1398-1403
9. Sheehy, A. M., Gaddis, N. C., and Malim, M. H. (2003) Nat. Med. 9, 1404-1407
10. Stopak, K., de Noronha, C., Yonemoto, W., and Greene, W. C. (2003) Mol. Cell 12, 591-601
11. Yu, X., Yu, Y., Liu, B., Luo, K., Kong, W., Mao, P., and Yu, X. F. (2003) Science 302, 1056-1060
12. Farrow, M. A., and Sheehy, A. M. (2008) Future Microbiol. 3, 145-154
13. Peng, G., Greenwell-Wild, T., Nares, S., Jin, W., Lei, K. J., Rangel, Z. G., Munson, P. J., and Wahl, S. M. (2007) Blood 110, 393-400
14. Pion, M., Granelli-Piperno, A., Mangeat, B., Stalder, R., Correa, R., Steinman, R. M., and Piguet, V. (2006) J. Exp. Med. 203, 2887-2893
15. Vetter, M. L., Johnson, M. E., Antons, A. K., Unutmaz, D., and D'Aquila, R. T. (2009) PLoS Pathog. 5, e1000292
16. Biasin, M., Piacentini, L., Lo Caputo, S., Kanari, Y., Magri, G., Trabattoni, D., Naddeo, V., Lopalco, L., Clivio, A., Cesana, E., Fasano, F., Bergamaschi, C., Mazzotta, F., Miyazawa, M., and Clerici, M. (2007) J. Infect. Dis. 195, 960-964
17. Vázquez-Pérez, J. A., Ormsby, C. E., Hernández-Juan, R., Torres, K. J., and Reyes-Terán, G. (2009) Retrovirology 6, 23
18. Jin, X., Brooks, A., Chen, H., Bennett, R., Reichman, R., and Smith, H. (2005) J. Virol. 79, 11513-11516
19. Land, A. M., Ball, T. B., Luo, M., Pilon, R., Sandstrom, P., Embree, J. E., Wachihi, C., Kimani, J., and Plummer, F. A. (2008) J. Virol. 82, 8172-8182
20. Pace, C., Keller, J., Nolan, D., James, I., Gaudieri, S., Moore, C., and Mallal, S. (2006) J. Virol. 80, 9259-9269
21. Peng, G., Lei, K. J., Jin, W., Greenwell-Wild, T., and Wahl, S. M. (2006) J. Exp. Med. 203, 41-46
22. Tanaka, Y., Marusawa, H., Seno, H., Matsumoto, Y., Ueda, Y., Kodama, Y., Endo, Y., Yamauchi, J., Matsumoto, T., Takaori-Kondo, A., Ikai, I., and Chiba, T. (2006) Biochem. Biophys. Res. Commun. 341, 314-319
23. Rose, K. M., Marin, M., Kozak, S. L., and Kabat, D. (2004) J. Biol. Chem. 279, 41744-41749
24. Stopak, K. S., Chiu, Y. L., Kropp, J., Grant, R. M., and Greene, W. C. (2007) J. Biol. Chem. 282, 3539-3546
25. Durocher, Y., Perret, S., and Kamen, A. (2002) Nucleic Acids Res. 30, E9
26. Badran, B. M., Wolinsky, S. M., Burny, A., and Willard-Gallo, K. E. (2002) J. Biol. Chem. 277, 47136-47148
27. Ahyi, A. N., Chang, H. C., Dent, A. L., Nutt, S. L., and Kaplan, M. H. (2009) J. Immunol. 183, 1598-1606
28. Birney, E., Stamatoyannopoulos, J. A., Dutta, A., Guigó, R., Gingeras, T. R., Margulies, E. H., Weng, Z., Snyder, M., Dermitzakis, E. T., Thurman, R. E., Kuehn, M. S., Taylor, C. M., Neph, S., Koch, C. M., Asthana, S., Malhotra, A., Adzhubei, I., Greenbaum, J. A., Andrews, R. M., Flicek, P., Boyle, P. J., Cao, H., Carter, N. P., Clelland, G. K., Davis, S., Day, N., Dhami, P., Dillon, S. C., Dorschner, M. O., Fiegler, H., Giresi, P. G., Goldy, J., Hawrylycz, M., Haydock, A., Humbert, R., James, K. D., Johnson, B. E., Johnson, E. M., Frum, T. T., Rosenzweig, E. R., Karnani, N., Lee, K., Lefebvre, G. C., Navas, P. A., Neri, F., Parker, S. C., Sabo, P. J., Sandstrom, R., Shafer, A., Vetrie, D., Weaver, M., Wilcox, S., Yu, M., Collins, F. S., Dekker, J., Lieb, J. D., Tullius, T. D., Crawford, G. E., Sunyaev, S., Noble, W. S., Dunham, I., Denoeud, F., Reymond, A., Kapranov, P., Rozowsky, J., Zheng, D., Castelo, R., Frankish, A., Harrow, J., Ghosh, S., Sandelin, A., Hofacker, I. L., Baertsch, R., Keefe, D., Dike, S., Cheng, J., Hirsch, H. A., Sekinger, E. A., Lagarde, J., Abril, J. F., Shahab, A., Flamm, C., Fried, C., Hackermüller, J., Hertel, J., Lindemeyer, M., Missal, K., Tanzer, A., Washietl, S., Korbel, J., Emanuelsson, O., Pedersen, J. S., Holroyd, N., Taylor, R., Swarbreck, D., Matthews, N., Dickson, M. C., Thomas, D. J., Weirauch, M. T., Gilbert, J., Drenkow, J., Bell, I., Zhao, X., Srinivasan, K. G., Sung, W. K., Ooi, H. S., Chiu, K. P., Foissac, S., Alioto, T., Brent, M., Pachter, L., Tress, M. L., Valencia, A., Choo, S. W., Choo, C. Y., Ucla, C., Manzano, C., Wyss, C., Cheung, E., Clark, T. G., Brown, J. B., Ganesh, M., Patel, S., Tammana, H., Chrast, J., Henrichsen, C. N., Kai, C., Kawai, J., Nagalakshmi, U., Wu, J., Lian, Z., Lian, J., Newburger, P., Zhang, X., Bickel, P., Mattick, J. S., Carninci, P., Hayashizaki, Y., Weissman, S., Hubbard, T., Myers, R. M., Rogers, J., Stadler, P. F., Lowe, T. M., Wei, C. L., Ruan, Y., Struhl, K., Gerstein, M., Antonarakis, S. E., Fu, Y., Green, E. D., Karaöz, U., Siepel, A., Taylor, J., Liefer, L. A., Wetterstrand, K. A., Good, P. J., Feingold, E. A., Guyer, M. S., Cooper, G. M., Asimenos, G., Dewey, C. N., Hou, M., Nikolaev, S., Montoya-Burgos, J. I., Löytynoja, A., Whelan, S., Pardi, F., Massingham, T., Huang, H., Zhang, N. R., Holmes, I., Mullikin, J. C., Ureta-Vidal, A., Paten, B., Seringhaus, M., Church, D., Rosenbloom, K., Kent, W. J., Stone, E. A., Batzoglou, S., Goldman, N., Hardison, R. C., Haussler, D., Miller, W., Sidow, A., Trinklein, N. D., Zhang, Z. D., Barrera, L., Stuart, R., King, D. C., Ameur, A., Enroth, S., Bieda, M. C., Kim, J., Bhinge, A. A., Jiang, N., Liu, J., Yao, F., Vega, V. B., Lee, C. W., Ng, P., Shahab, A., Yang, A., Moqtaderi, Z., Zhu, Z., Xu, X., Squazzo, S., Oberley, M. J., Inman, D., Singer, M. A., Richmond, T. A., Munn, K. J., Rada-Iglesias, A., Wallerman, O., Komorowski, J., Fowler, J. C., Couttet, P., Bruce, A. W., Dovey, O. M., Ellis, P. D., Langford, C. F., Nix, D. A., Euskirchen, G., Hartman, S., Urban, A. E., Kraus, P., Van Calcar, S., Heintzman, N., Kim, T. H., Wang, K., Qu, C., Hon, G., Luna, R., Glass, C. K., Rosenfeld, M. G., Aldred, S. F., Cooper, S. J., Halees, A., Lin, J. M., Shulha, H. P., Zhang, X., Xu, M., Haidar, J. N., Yu, Y., Ruan, Y., Iyer, V. R., Green, R. D., Wadelius, C., Farnham, P. J., Ren, B., Harte, R. A., Hinrichs, A. S., Trumbower, H., Clawson, H., Hillman-Jackson, J., Zweig, A. S., Smith, K., Thakkapallayil, A., Barber, G., Kuhn, R. M., Karolchik, D., Armengol, L., Bird, C. P., de, Bakker, P. I., Kern, A. D., Lopez-Bigas, N., Martin, J. D., Stranger, B. E., Woodroffe, A., Davydov, E., Dimas, A., Eyras, E., Hallgrímsdóttir, I. B., Huppert, J., Zody, M. C., Abecasis, G. R., Estivill, X., Bouffard, G. G., Guan, X., Hansen, N. F., Idol, J. R., Maduro, V. V., Maskeri, B., McDowell, J. C., Park, M., Thomas, P. J., Young, A. C., Blakesley, R. W., Muzny, D. M., Sodergren, E., Wheeler, D. A., Worley, K. C., Jiang, H., Weinstock, G. M., Gibbs, R. A., Graves, T., Fulton, R., Mardis, E. R., Wilson, R. K., Clamp, M., Cuff, J., Gnerre, S., Jaffe, D. B., Chang, J. L., Lindblad-Toh, K., Lander, E. S., Koriabine, M., Nefedov, M., Osoegawa, K., Yoshinaga, Y., Zhu, B., and de Jong, P. J. (2007) Nature 447, 799-816
29. Muckenfuss, H., Kaiser, J. K., Krebil, E., Battenberg, M., Schwer, C., Cichutek, K., Münk, C., and Flory, E. (2007) Nucleic Acids Res. 35, 3784-3796
30. Jarmuz, A., Chester, A., Bayliss, J., Gisbourne, J., Dunham, I., Scott, J., and Navaratnam, N. (2002) Genomics 79, 285-296
31. Pido-Lopez, J., Whittall, T., Wang, Y., Bergmeier, L. A., Babaahmady, K., Singh, M., and Lehner, T. (2007) J. Immunol. 178, 1671-1679
32. Wang, Y. J., Wang, X., Zhang, H., Zhou, L., Liu, S., Kolson, D. L., Song, L., Ye, L., and Ho, W. Z. (2009) J. Neuroimmunol. 206, 14-21
33. Ying, S., Zhang, X., Sarkis, P. T., Xu, R., and Yu, X. (2007) Acta Biochim. Biophys. Sin. 39, 297-304
34. Farré, D., Roset, R., Huerta, M., Adsuara, J. E., Roselló, L., Albà, M. M., and Messeguer, X. (2003) Nucleic Acids Res. 31, 3651-3653
35. Messeguer, X., Escudero, R., Farré, D., Núñez, O., Martínez, J., and Albà, M. M. (2002) Bioinformatics 18, 333-334
36. Hu, C. M., Jang, S. Y., Fanzo, J. C., and Pernis, A. B. (2002) J. Biol. Chem. 277, 49238-49246
37. Lee, C. G., Kang, K. H., So, J. S., Kwon, H. K., Son, J. S., Song, M. K., Sahoo, A., Yi, H. J., Hwang, K. C., Matsuyama, T., Yui, K., and Im, S. H. (2009) Mol. Immunol. 46, 613-621
38. Rengarajan, J., Mowen, K. A., McBride, K. D., Smith, E. D., Singh, H., and Glimcher, L. H. (2002) J. Exp. Med. 195, 1003-1012
39. Zhu, C., Rao, K., Xiong, H., Gagnidze, K., Li, F., Horvath, C., and Plevy, S. (2003) J. Biol. Chem. 278, 39372-39382
40. Luo, H., and Tian, M. (2010) Mol. Immunol. 47, 1383-1395
41. Rao, A., Luo, C., and Hogan, P. G. (1997) Annu. Rev. Immunol. 15, 707-747
42. Ozato, K., Tailor, P., and Kubota, T. (2007) J. Biol. Chem. 282, 20065-20069
43. Lazorchak, A. S., Schlissel, M. S., and Zhuang, Y. (2006) Mol. Cell Biol. 26, 810-821
44. Nagulapalli, S., Goheer, A., Pitt, L., McIntosh, L. P., and Atchison, M. L. (2002) Mol. Cell Biol. 22, 7337-7350
45. van der Stoep, N., Quinten, E., Marcondes Rezende, M., and van den Elsen, P. J. (2004) Blood 104, 2849-2857
46. Mamane, Y., Heylbroeck, C., Génin, P., Algarté, M., Servant, M. J., LePage, C., DeLuca, C., Kwon, H., Lin, R., and Hiscott, J. (1999) Gene 237, 1-14
47. An, P., Bleiber, G., Duggal, P., Nelson, G., May, M., Mangeat, B., Alobwede, I., Trono, D., Vlahov, D., Donfield, S., Goedert, J. J., Phair, J., Buchbinder, S., O'Brien, S. J., Telenti, A., and Winkler, C. A. (2004) J. Virol. 78, 11070-11076