PROMO: Detection of known transcription regulatory elements using species-tailored searches

Bioinformatics

Volumn 18, Issue 2, 2002, Pages 333-334

  Messeguer, Xavier ^a   Escudero, Ruth ^a   Farré, Domènec ^a   Núñez, Oscar ^a   Martínez, Javier ^a   Albà, M Mar ^b  

^a UNIVERSITAT POLITÈCNICA DE CATALUNYA   (Spain)

^b UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; COMPUTER PROGRAM; CONTROLLED STUDY; DNA SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; TAXON; TAXONOMIC IDENTIFICATION; TRANSCRIPTION REGULATION; VARIANCE;

EID: 0036190875     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.2.333     Document Type: Article

References (6)

1. Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences
2. Finding protein-binding sites in DNA sequences: The next generation?
3. MatInd and MatInspector: New fast and versatile tools for detection of consensus matches in nucleotide sequence data
4. RegulonDB (Version 3.2): Transcriptional regulation and operon organization in Escherichia coli K-12
5. Identification of regulatory regions which confer muscle-specific gene expression
6. The TRANSFAC system on gene expression regulation