메뉴 건너뛰기




Volumn 23, Issue 2, 2011, Pages 336-373

Bayes-Optimal chemotaxis

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; CELL POLARITY; CHEMOTAXIS; GROWTH CONE; HUMAN; PHYSIOLOGY; THEORETICAL MODEL;

EID: 78651501521     PISSN: 08997667     EISSN: 1530888X     Source Type: Journal    
DOI: 10.1162/NECO_a_00075     Document Type: Article
Times cited : (19)

References (58)
  • 1
    • 0004245694 scopus 로고
    • Abramowitz, M., & Stegun, I. A. (Eds.), New York: Dover
    • Abramowitz, M., & Stegun, I. A. (Eds.). (1970). Handbook of mathematical functions. New York: Dover.
    • (1970) Handbook of mathematical functions
  • 2
    • 0035384056 scopus 로고    scopus 로고
    • Biophysical model of axonal pathfinding
    • Aeschlimann, M., & Tettoni, L. (2001). Biophysical model of axonal pathfinding. Neurocomput., 38, 87-92.
    • (2001) Neurocomput , vol.38 , pp. 87-92
    • Aeschlimann, M.1    Tettoni, L.2
  • 3
    • 34548378653 scopus 로고    scopus 로고
    • An information-theoretic characterization of the optimal gradient sensing response of cells
    • Andrews, B. W., & Iglesias, P. A. (2007). An information-theoretic characterization of the optimal gradient sensing response of cells. PLoS Comput. Biol., 3, 1490-1497.
    • (2007) PLoS Comput. Biol. , vol.3 , pp. 1490-1497
    • Andrews, B.W.1    Iglesias, P.A.2
  • 4
    • 76749095004 scopus 로고    scopus 로고
    • Increased accuracy of ligand sensing by receptor internalization
    • Aquino, G., & Endres, R. G. (2010). Increased accuracy of ligand sensing by receptor internalization. Phys. Rev. E., 81, 021909.
    • (2010) Phys. Rev. E. , vol.81 , pp. 021909
    • Aquino, G.1    Endres, R.G.2
  • 5
    • 13344269588 scopus 로고    scopus 로고
    • Alocal coupling model and compass parameter for eukaryotic chemotaxis
    • Arrieumerlou, C.& Meyer,T. (2005).Alocal coupling model and compass parameter for eukaryotic chemotaxis. Dev. Cell, 8, 215-227.
    • (2005) Dev. Cell , vol.8 , pp. 215-227
    • Arrieumerlou, C.1    Meyer, T.2
  • 6
    • 0017664223 scopus 로고
    • Physics of chemoreception
    • Berg, H. C., & Purcell, E. M. (1977). Physics of chemoreception. Biophys. J., 20, 193-219.
    • (1977) Biophys. J. , vol.20 , pp. 193-219
    • Berg, H.C.1    Purcell, E.M.2
  • 7
    • 22544467427 scopus 로고    scopus 로고
    • Physical limits to biochemical signaling
    • USA
    • Bialek, W., & Setayeshgar, S. (2005). Physical limits to biochemical signaling. Proc. Natl. Acad. Sci. USA, 102, 10040-10045.
    • (2005) Proc. Natl. Acad. Sci. , vol.102 , pp. 10040-10045
    • Bialek, W.1    Setayeshgar, S.2
  • 8
    • 0032492852 scopus 로고    scopus 로고
    • Receptor clustering as a cellular mechanism to control sensitivity
    • Bray, D., Levin, M. D., & Morton-Firth, C. J. (1998). Receptor clustering as a cellular mechanism to control sensitivity. Nature, 393, 85-88.
    • (1998) Nature , vol.393 , pp. 85-88
    • Bray, D.1    Levin, M.D.2    Morton-Firth, C.J.3
  • 9
    • 0037418830 scopus 로고    scopus 로고
    • The morphogen Sonic Hedgehog is an axonal chemoattractant that collaborates with Netrin-1 in midline axon guidance
    • Charron, F., Stein, E., Jeong, J., McMahon, A. P., & Tessier-Lavigne, M. (2003). The morphogen Sonic Hedgehog is an axonal chemoattractant that collaborates with Netrin-1 in midline axon guidance. Cell, 113, 11-23.
    • (2003) Cell , vol.113 , pp. 11-23
    • Charron, F.1    Stein, E.2    Jeong, J.3    Mcmahon, A.P.4    Tessier-Lavigne, M.5
  • 10
    • 0020361733 scopus 로고
    • A theory of measurement error and its implications for spatial and temporal gradient sensing during chemotaxis
    • DeLisi, C., & Marchetti, F. (1982). A theory of measurement error and its implications for spatial and temporal gradient sensing during chemotaxis. Cell Biophys., 4 211-229.
    • (1982) Cell Biophys , vol.4 , pp. 211-229
    • Delisi, C.1    Marchetti, F.2
  • 11
    • 0027976137 scopus 로고
    • Mechanisms of leukocyte motility and chemotaxis
    • Downey, G. P. (1994). Mechanisms of leukocyte motility and chemotaxis. Curr. Opin. Immunol., 6, 113-124.
    • (1994) Curr. Opin. Immunol. , vol.6 , pp. 113-124
    • Downey, G.P.1
  • 12
    • 34347235785 scopus 로고    scopus 로고
    • Doya, K., Ishii, S., Pouget, A., & Rao, R. P. N. (Eds.), Cambridge, MA: MIT Press
    • Doya, K., Ishii, S., Pouget, A., & Rao, R. P. N. (Eds.). (2007). Bayesian brain: Probabilistic approaches to neural coding. Cambridge, MA: MIT Press.
    • (2007) Bayesian brain: Probabilistic approaches to neural coding
  • 13
    • 57349128869 scopus 로고    scopus 로고
    • Accuracy of direct gradient sensing by single cells
    • USA
    • Endres, R. G., & Wingreen, N. S. (2008). Accuracy of direct gradient sensing by single cells. Proc. Natl. Acad. Sci. USA, 105, 15749-15754.
    • (2008) Proc. Natl. Acad. Sci. , vol.105 , pp. 15749-15754
    • Endres, R.G.1    Wingreen, N.S.2
  • 14
    • 70349866271 scopus 로고    scopus 로고
    • Maximum likelihood and the single receptor
    • Endres, R. G., & Wingreen, N. S. (2009). Maximum likelihood and the single receptor. Phys. Rev. Lett., 103, 158101.
    • (2009) Phys. Rev. Lett. , vol.103 , pp. 158101
    • Endres, R.G.1    Wingreen, N.S.2
  • 15
    • 0037165165 scopus 로고    scopus 로고
    • Humans integrate visual and haptic information in a statistically optimal fashion
    • Ernst, M. O., & Banks, M. S. (2002). Humans integrate visual and haptic information in a statistically optimal fashion. Nature, 415, 429-433.
    • (2002) Nature , vol.415 , pp. 429-433
    • Ernst, M.O.1    Banks, M.S.2
  • 16
    • 0024635815 scopus 로고
    • Quantitative analysis of cell motility and chemotaxis in dictyostelium discoideum by using an image processing system and a novel chemotaxis chamber providing stationary chemical gradients
    • Fisher, P. R., Merkl, R., & Gerisch, G. (1989). Quantitative analysis of cell motility and chemotaxis in dictyostelium discoideum by using an image processing system and a novel chemotaxis chamber providing stationary chemical gradients. J. Cell Biol., 108, 973-984.
    • (1989) J. Cell Biol. , vol.108 , pp. 973-984
    • Fisher, P.R.1    Merkl, R.2    Gerisch, G.3
  • 18
    • 0030762758 scopus 로고    scopus 로고
    • Diffusion in axon guidance
    • Goodhill, G. J. (1997). Diffusion in axon guidance. Eur. J. Neurosci., 9, 1414-1421.
    • (1997) Eur. J. Neurosci. , vol.9 , pp. 1414-1421
    • Goodhill, G.J.1
  • 19
    • 0032039243 scopus 로고    scopus 로고
    • Axon guidance: Stretching gradients to the limit
    • Goodhill, G. J., & Baier, H. (1998). Axon guidance: Stretching gradients to the limit. Neur. Comput., 10, 521-527.
    • (1998) Neur. Comput. , vol.10 , pp. 521-527
    • Goodhill, G.J.1    Baier, H.2
  • 20
    • 0032695993 scopus 로고    scopus 로고
    • Theoretical analysis of gradient detection by growth cones
    • Goodhill, G., & Urbach, J. (1999). Theoretical analysis of gradient detection by growth cones. J. Neurobiol., 41, 230-241.
    • (1999) J. Neurobiol. , vol.41 , pp. 230-241
    • Goodhill, G.1    Urbach, J.2
  • 22
    • 17944370144 scopus 로고    scopus 로고
    • C. elegans slit acts in midline, dorsal-ventral, and anterior-posterior guidance via the SAX-3/Robo receptor
    • Hao, J. C., Yu, T. W., Fujisawa, K., Culotti, J. G., Gengyo-Ando, K., Mittani, S., et al. (2001). C. elegans slit acts in midline, dorsal-ventral, and anterior-posterior guidance via the SAX-3/Robo receptor. Neuron, 32, 25-38.
    • (2001) Neuron , vol.32 , pp. 25-38
    • Hao, J.C.1    Yu, T.W.2    Fujisawa, K.3    Culotti, J.G.4    Gengyo-Ando, K.5    Mittani, S.6
  • 23
    • 0037078334 scopus 로고    scopus 로고
    • An intracellular signaling hierarchy determines direction of migration in opposing chemotactic gradients
    • Heit, B., Tavener, S., Raharjo, E., & Kubes, P. (2002). An intracellular signaling hierarchy determines direction of migration in opposing chemotactic gradients. J. Cell Biol., 159, 91-102.
    • (2002) J. Cell Biol. , vol.159 , pp. 91-102
    • Heit, B.1    Tavener, S.2    Raharjo, E.3    Kubes, P.4
  • 24
    • 0033533959 scopus 로고    scopus 로고
    • Models of axon guidance and bundling during development
    • Hentschel, H. G., & van Ooyen, A. (1999). Models of axon guidance and bundling during development. Proc. Biol. Sci., 266, 2231-2238.
    • (1999) Proc. Biol. Sci. , vol.266 , pp. 2231-2238
    • Hentschel, H.G.1    Van Ooyen, A.2
  • 25
    • 0034635567 scopus 로고    scopus 로고
    • Localization of the G protein betagamma complex in living cells during chemotaxis
    • Jin, T., Zhang, N., Long, Y., Parent, C. A., & Devreotes, P. N. (2000). Localization of the G protein betagamma complex in living cells during chemotaxis. Science, 287, 1034-1036.
    • (2000) Science , vol.287 , pp. 1034-1036
    • Jin, T.1    Zhang, N.2    Long, Y.3    Parent, C.A.4    Devreotes, P.N.5
  • 26
    • 44949192913 scopus 로고    scopus 로고
    • An information theoretic framework for eukaryotic gradient sensing
    • B. Schölkopf, J. Platt, &T. Hoffman (Eds.), Cambridge, MA: MIT Press
    • Kimmel, J. M., Salter, R. M., & Thomas, P. J. (2007). An information theoretic framework for eukaryotic gradient sensing. In B. Schölkopf, J. Platt, &T. Hoffman (Eds.), Advances in neural information processing systems, 19 (pp. 705-712). Cambridge, MA: MIT Press.
    • (2007) Advances in neural information processing systems , vol.19 , pp. 705-712
    • Kimmel, J.M.1    Salter, R.M.2    Thomas, P.J.3
  • 27
    • 8444239052 scopus 로고    scopus 로고
    • The Bayesian brain: The role of uncertainty in neural coding and computation
    • Knill, D. C., & Pouget, A. (2004). The Bayesian brain: The role of uncertainty in neural coding and computation. Trends Neurosci., 27, 712-719.
    • (2004) Trends Neurosci. , vol.27 , pp. 712-719
    • Knill, D.C.1    Pouget, A.2
  • 28
    • 0037223063 scopus 로고    scopus 로고
    • Regulation of G protein-coupled receptor kinases and arrestins during receptor desensitization
    • Kohout, T. A., & Lefkowitz, R. J. (2003). Regulation of G protein-coupled receptor kinases and arrestins during receptor desensitization. Mol. Pharmacol., 63, 9-18.
    • (2003) Mol. Pharmacol. , vol.63 , pp. 9-18
    • Kohout, T.A.1    Lefkowitz, R.J.2
  • 29
    • 35548929021 scopus 로고    scopus 로고
    • Decision theory: What "should" the nervous system do?
    • Kording, K. (2007). Decision theory: What "should" the nervous system do? Science, 318, 606-610.
    • (2007) Science , vol.318 , pp. 606-610
    • Kording, K.1
  • 30
    • 1642553405 scopus 로고    scopus 로고
    • Bayesian integration in sensorimotor learning
    • Kording, K. P., & Wolpert, D. M. (2004). Bayesian integration in sensorimotor learning. Nature, 427, 244-247.
    • (2004) Nature , vol.427 , pp. 244-247
    • Kording, K.P.1    Wolpert, D.M.2
  • 31
    • 0020416576 scopus 로고
    • Influence of external concentration fluctuations on leukocyte chemotactic orientation
    • Lauffenburger, D. A. (1982). Influence of external concentration fluctuations on leukocyte chemotactic orientation. Cell Biophys., 4, 177-209.
    • (1982) Cell Biophys , vol.4 , pp. 177-209
    • Lauffenburger, D.A.1
  • 33
    • 0036219106 scopus 로고    scopus 로고
    • Models of eukaryotic gradient sensing: Application to chemotaxis of amoebae and neutrophils
    • Levchenko, A., & Iglesias, P. A. (2002). Models of eukaryotic gradient sensing: Application to chemotaxis of amoebae and neutrophils. Biophys. J., 82, 50-63.
    • (2002) Biophys. J. , vol.82 , pp. 50-63
    • Levchenko, A.1    Iglesias, P.A.2
  • 34
    • 78651475899 scopus 로고    scopus 로고
    • Directional sensing in eukaryotic chemotaxis: A balanced inactivation model
    • USA
    • Levine, H., Kessler, D. A., & Rappel, W. J. (2004). Directional sensing in eukaryotic chemotaxis: A balanced inactivation model. Proc. Natl. Acad. Sci. USA, 101, 8951-8956.
    • (2004) Proc. Natl. Acad. Sci. , vol.101 , pp. 8951-8956
    • Levine, H.1    Kessler, D.A.2    Rappel, W.J.3
  • 35
    • 67349086281 scopus 로고    scopus 로고
    • The trip of the tip: Understanding the growth cone machinery
    • Lowery, L. A., & van Vactor, D. (2009). The trip of the tip: Understanding the growth cone machinery. Nat. Rev. Mol. Cell. Biol., 10, 332-343.
    • (2009) Nat. Rev. Mol. Cell. Biol. , vol.10 , pp. 332-343
    • Lowery, L.A.1    Van Vactor, D.2
  • 36
    • 23244464284 scopus 로고    scopus 로고
    • Molecular gradients and development of retinotopic maps
    • McLaughlin, T., & O'Leary, D. D. M. (2005). Molecular gradients and development of retinotopic maps. Annu. Rev. Neurosci., 28, 327-355.
    • (2005) Annu. Rev. Neurosci. , vol.28 , pp. 327-355
    • Mclaughlin, T.1    O'Leary, D.D.M.2
  • 37
    • 77349100415 scopus 로고    scopus 로고
    • Optimizing chemotaxis by measuring unbound-bound transitions
    • Mortimer, D., Dayan, P., Burrage, K., & Goodhill, G. J.(2009). Optimizing chemotaxis by measuring unbound-bound transitions. Physica D, 239, 477-484.
    • (2009) Physica D , vol.239 , pp. 477-484
    • Mortimer, D.1    Dayan, P.2    Burrage, K.3    Goodhill, G.J.4
  • 40
    • 54249125964 scopus 로고    scopus 로고
    • Stochastic control of spontaneous signal generation for gradient sensing in chemotaxis
    • Naoki, H., Sakumura, Y., & Ishii, S. (2008). Stochastic control of spontaneous signal generation for gradient sensing in chemotaxis. J. Theor. Biol., 255, 259-266.
    • (2008) J. Theor. Biol. , vol.255 , pp. 259-266
    • Naoki, H.1    Sakumura, Y.2    Ishii, S.3
  • 41
    • 33646764616 scopus 로고    scopus 로고
    • Spontaneous polarizationineukaryotic gradient sensing:Amathematical model based on mutual inhibition of frontness and backness pathways
    • Narang, A.(2006). Spontaneous polarizationineukaryotic gradient sensing:Amathematical model based on mutual inhibition of frontness and backness pathways. J. Theor. Biol., 240, 538-553.
    • (2006) J. Theor. Biol. , vol.240 , pp. 538-553
    • Narang, A.1
  • 42
    • 34047218649 scopus 로고    scopus 로고
    • A mathematical model for neutrophil gradient sensing and polarization
    • Onsum, M., & Rao, C. V. (2007). A mathematical model for neutrophil gradient sensing and polarization. PLoS Comput. Biol., 3, e36.
    • (2007) PLoS Comput. Biol. , vol.3
    • Onsum, M.1    Rao, C.V.2
  • 43
    • 0033617576 scopus 로고    scopus 로고
    • A cell's sense of direction
    • Parent, C. A., & Devreotes, P. N. (1999). A cell's sense of direction. Science, 284, 765-770.
    • (1999) Science , vol.284 , pp. 765-770
    • Parent, C.A.1    Devreotes, P.N.2
  • 44
    • 23244442051 scopus 로고    scopus 로고
    • A molecular model for axon guidance based on cross talk between rho GTPases
    • Sakumura, Y., Tsukada, Y., Yamamoto, N., & Ishii, S. (2005). A molecular model for axon guidance based on cross talk between rho GTPases. Biophys. J., 89, 812-822.
    • (2005) Biophys. J. , vol.89 , pp. 812-822
    • Sakumura, Y.1    Tsukada, Y.2    Yamamoto, N.3    Ishii, S.4
  • 45
    • 33746785265 scopus 로고    scopus 로고
    • Cellular asymmetry and individuality in directional sensing
    • USA
    • Samadani, A., Mettetal, J., & van Oudenaarden, A. (2006). Cellular asymmetry and individuality in directional sensing. Proc. Natl. Acad. Sci. USA, 103, 11549-11554.
    • (2006) Proc. Natl. Acad. Sci. , vol.103 , pp. 11549-11554
    • Samadani, A.1    Mettetal, J.2    Van Oudenaarden, A.3
  • 46
    • 21844452715 scopus 로고    scopus 로고
    • Distinguishing modes of eukaryotic gradient sensing
    • Skupsky, R., Losert, W., & Nossal, R. J. (2005). Distinguishing modes of eukaryotic gradient sensing. Biophys. J., 89, 2806-2823.
    • (2005) Biophys. J. , vol.89 , pp. 2806-2823
    • Skupsky, R.1    Losert, W.2    Nossal, R.J.3
  • 47
    • 34249801518 scopus 로고    scopus 로고
    • Bias in the gradient-sensing response of chemotactic cells
    • Skupsky, R., McCann, C., Nossal, R., & Losert, W. (2007). Bias in the gradient-sensing response of chemotactic cells. J. Theor. Biol., 247, 242-258.
    • (2007) J. Theor. Biol. , vol.247 , pp. 242-258
    • Skupsky, R.1    Mccann, C.2    Nossal, R.3    Losert, W.4
  • 48
    • 0035097592 scopus 로고    scopus 로고
    • The cell biology of neuronal navigation
    • Song, H., & Poo, M.-M. (2001). The cell biology of neuronal navigation. Nat. Cell. Biol., 3, E81-E88.
    • (2001) Nat. Cell. Biol. , vol.3
    • Song, H.1    Poo, M.-M.2
  • 49
    • 11744262370 scopus 로고    scopus 로고
    • Adaptation and optimal chemotactic strategy for E coli
    • Strong, S. P., Freedman, B., Bialek, W., & Koberle, R. (1998). Adaptation and optimal chemotactic strategy for E. coli. Phys. Rev. E., 57, 4604-4617.
    • (1998) Phys. Rev. E. , vol.57 , pp. 4604-4617
    • Strong, S.P.1    Freedman, B.2    Bialek, W.3    Koberle, R.4
  • 50
    • 14644413462 scopus 로고    scopus 로고
    • Trafficking of a ligand-receptor complex on the growth cones as an essential step for the uptake of nerve growth factor at the distal end of the axon: A single-molecule analysis
    • Tani, T., Miyamoto, Y., Fujimori, K. E., Taguchi, T., Yanagida, T., Sako, Y., et al. (2005). Trafficking of a ligand-receptor complex on the growth cones as an essential step for the uptake of nerve growth factor at the distal end of the axon: A single-molecule analysis. J. Neurosci., 25, 2181-2191.
    • (2005) J. Neurosci. , vol.25 , pp. 2181-2191
    • Tani, T.1    Miyamoto, Y.2    Fujimori, K.E.3    Taguchi, T.4    Yanagida, T.5    Sako, Y.6
  • 51
    • 0022612509 scopus 로고
    • Consequences of chemosensory phenomena for leukocyte orientation
    • Tranquillo, R. T., & Lauffenburger, D. A. (1986). Consequences of chemosensory phenomena for leukocyte orientation. Cell Biophys., 8, 1-46.
    • (1986) Cell Biophys , vol.8 , pp. 1-46
    • Tranquillo, R.T.1    Lauffenburger, D.A.2
  • 52
    • 0023079642 scopus 로고
    • Stochastic-model of leukocyte chemosensory movement
    • Tranquillo, R. T., & Lauffenburger, D. A. (1987). Stochastic-model of leukocyte chemosensory movement. J. Math. Biol., 25, 229-262.
    • (1987) J. Math. Biol. , vol.25 , pp. 229-262
    • Tranquillo, R.T.1    Lauffenburger, D.A.2
  • 53
    • 0035955356 scopus 로고    scopus 로고
    • Single-molecule analysis of chemotactic signaling in Dictyostelium cells
    • Ueda, M., Sako, Y., Tanaka, T., Devreotes, P., & Yanagida, T. (2001). Single-molecule analysis of chemotactic signaling in Dictyostelium cells. Science, 294, 864-867.
    • (2001) Science , vol.294 , pp. 864-867
    • Ueda, M.1    Sako, Y.2    Tanaka, T.3    Devreotes, P.4    Yanagida, T.5
  • 54
    • 34447263536 scopus 로고    scopus 로고
    • Stochastic signal processing and transduction in chemotactic response of eukaryotic cells
    • Ueda, M., & Shibata, T. (2007). Stochastic signal processing and transduction in chemotactic response of eukaryotic cells. Biophys. J., 93, 11-20.
    • (2007) Biophys. J. , vol.93 , pp. 11-20
    • Ueda, M.1    Shibata, T.2
  • 56
    • 34548612846 scopus 로고    scopus 로고
    • Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection
    • van Haastert, P. J. M., & Postma, M. (2007). Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection. Biophys. J., 93, 1787-1796.
    • (2007) Biophys. J. , vol.93 , pp. 1787-1796
    • Van Haastert, P.J.M.1    Postma, M.2
  • 57
    • 33748269657 scopus 로고    scopus 로고
    • Signaling pathways mediating chemotaxis in the social amoeba, Dictyostelium discoideum
    • Willard, S. S., & Devreotes, P. N. (2006). Signaling pathways mediating chemotaxis in the social amoeba, Dictyostelium discoideum. Eur. J. Cell Biol., 85, 897-904.
    • (2006) Eur. J. Cell Biol. , vol.85 , pp. 897-904
    • Willard, S.S.1    Devreotes, P.N.2
  • 58
    • 0019444623 scopus 로고
    • Consequences of chemotactic peptide receptor modulation for leukocyte orientation
    • Zigmond, S. H. (1981). Consequences of chemotactic peptide receptor modulation for leukocyte orientation. J. Cell Biol., 88, 644-647.
    • (1981) J. Cell Biol. , vol.88 , pp. 644-647
    • Zigmond, S.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.