-
1
-
-
72849132752
-
Imprinting and epigenetic changes in the early embryo
-
Weaver, J.R., Susiarjo, M. and Bartolomei, M.S. (2009) Imprinting and epigenetic changes in the early embryo. Mamm. Genome, 20, 532-543.
-
(2009)
Mamm. Genome
, vol.20
, pp. 532-543
-
-
Weaver, J.R.1
Susiarjo, M.2
Bartolomei, M.S.3
-
2
-
-
33645456512
-
Interactions between imprinting effects: summary and review
-
Cattanach, B.M., Beechey, C.V. and Peters, J. (2006) Interactions between imprinting effects: summary and review. Cytogenet. Genome Res., 113, 17-23.
-
(2006)
Cytogenet. Genome Res.
, vol.113
, pp. 17-23
-
-
Cattanach, B.M.1
Beechey, C.V.2
Peters, J.3
-
3
-
-
84866407240
-
Imprinted genes and placental growth: implications for the developmental origins of health and disease
-
In Burton, J., Barker, D., Moffett, A. and Thornburg, K. (eds), Cambridge University Press, Cambridge, UK
-
Tycko, B. and John, R. (2010) Imprinted genes and placental growth: implications for the developmental origins of health and disease. In Burton, J., Barker, D., Moffett, A. and Thornburg, K. (eds), The Placenta and Human Developmental Programming. Cambridge University Press, Cambridge, UK, pp. 57-69.
-
(2010)
The Placenta and Human Developmental Programming
, pp. 57-69
-
-
Tycko, B.1
John, R.2
-
4
-
-
46249117780
-
Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation
-
Kerkel, K., Spadola, A., Yuan, E., Kosek, J., Jiang, L., Hod, E., Li, K., Murty, V.V., Schupf, N., Vilain, E. et al. (2008) Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation. Nat. Genet., 40, 904-908.
-
(2008)
Nat. Genet.
, vol.40
, pp. 904-908
-
-
Kerkel, K.1
Spadola, A.2
Yuan, E.3
Kosek, J.4
Jiang, L.5
Hod, E.6
Li, K.7
Murty, V.V.8
Schupf, N.9
Vilain, E.10
-
5
-
-
68149128490
-
Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions
-
Dindot, S.V., Person, R., Strivens, M., Garcia, R. and Beaudet, A.L. (2009) Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions. Genome Res., 19, 1374-1383.
-
(2009)
Genome Res.
, vol.19
, pp. 1374-1383
-
-
Dindot, S.V.1
Person, R.2
Strivens, M.3
Garcia, R.4
Beaudet, A.L.5
-
6
-
-
36249017308
-
Widespread monoallelic expression on human autosomes
-
Gimelbrant, A., Hutchinson, J.N., Thompson, B.R. and Chess, A. (2007) Widespread monoallelic expression on human autosomes. Science, 318, 1136-1140.
-
(2007)
Science
, vol.318
, pp. 1136-1140
-
-
Gimelbrant, A.1
Hutchinson, J.N.2
Thompson, B.R.3
Chess, A.4
-
7
-
-
42549118127
-
Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery
-
Tan, A.C., Fan, J.B., Karikari, C., Bibikova, M., Garcia, E.W., Zhou, L., Barker, D., Serre, D., Feldmann, G., Hruban, R.H. et al. (2008) Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery. Cancer Biol. Ther., 7, 135-144.
-
(2008)
Cancer Biol. Ther.
, vol.7
, pp. 135-144
-
-
Tan, A.C.1
Fan, J.B.2
Karikari, C.3
Bibikova, M.4
Garcia, E.W.5
Zhou, L.6
Barker, D.7
Serre, D.8
Feldmann, G.9
Hruban, R.H.10
-
8
-
-
42449136232
-
Allelic imbalance in BRCA1 and BRCA2 gene expression is associated with an increased breast cancer risk
-
Chen, X., Weaver, J., Bove, B.A., Vanderveer, L.A., Weil, S.C., Miron, A., Daly, M.B. and Godwin, A.K. (2008) Allelic imbalance in BRCA1 and BRCA2 gene expression is associated with an increased breast cancer risk. Hum. Mol. Genet., 17, 1336-1348.
-
(2008)
Hum. Mol. Genet.
, vol.17
, pp. 1336-1348
-
-
Chen, X.1
Weaver, J.2
Bove, B.A.3
Vanderveer, L.A.4
Weil, S.C.5
Miron, A.6
Daly, M.B.7
Godwin, A.K.8
-
9
-
-
33846978695
-
Relative impact of nucleotide and copy number variation on gene expression phenotypes
-
Stranger, B.E., Forrest, M.S., Dunning, M., Ingle, C.E., Beazley, C., Thorne, N., Redon, R., Bird, C.P., de Grassi, A., Lee, C. et al. (2007) Relative impact of nucleotide and copy number variation on gene expression phenotypes. Science, 315, 848-853.
-
(2007)
Science
, vol.315
, pp. 848-853
-
-
Stranger, B.E.1
Forrest, M.S.2
Dunning, M.3
Ingle, C.E.4
Beazley, C.5
Thorne, N.6
Redon, R.7
Bird, C.P.8
Grassi, A.D.9
Lee, C.10
-
10
-
-
77950458649
-
Transcriptome genetics using second generation sequencing in a Caucasian population
-
Montgomery, S.B., Sammeth, M., Gutierrez-Arcelus, M., Lach, R.P., Ingle, C., Nisbett, J., Guigo, R. and Dermitzakis, E.T. (2010) Transcriptome genetics using second generation sequencing in a Caucasian population. Nature, 464, 773-777.
-
(2010)
Nature
, vol.464
, pp. 773-777
-
-
Montgomery, S.B.1
Sammeth, M.2
Gutierrez-Arcelus, M.3
Lach, R.P.4
Ingle, C.5
Nisbett, J.6
Guigo, R.7
Dermitzakis, E.T.8
-
11
-
-
77950460661
-
Understanding mechanisms underlying human gene expression variation with RNA sequencing
-
Pickrell, J.K., Marioni, J.C., Pai, A.A., Degner, J.F., Engelhardt, B.E., Nkadori, E., Veyrieras, J.B., Stephens, M., Gilad, Y. and Pritchard, J.K. (2010) Understanding mechanisms underlying human gene expression variation with RNA sequencing. Nature, 464, 768-772.
-
(2010)
Nature
, vol.464
, pp. 768-772
-
-
Pickrell, J.K.1
Marioni, J.C.2
Pai, A.A.3
Degner, J.F.4
Engelhardt, B.E.5
Nkadori, E.6
Veyrieras, J.B.7
Stephens, M.8
Gilad, Y.9
Pritchard, J.K.10
-
12
-
-
61449218868
-
Targeted screening of cis-regulatory variation in human haplotypes
-
Verlaan, D.J., Ge, B., Grundberg, E., Hoberman, R., Lam, K.C., Koka, V., Dias, J., Gurd, S., Martin, N.W., Mallmin, H. et al. (2009) Targeted screening of cis-regulatory variation in human haplotypes. Genome Res., 19, 118-127.
-
(2009)
Genome Res.
, vol.19
, pp. 118-127
-
-
Verlaan, D.J.1
Ge, B.2
Grundberg, E.3
Hoberman, R.4
Lam, K.C.5
Koka, V.6
Dias, J.7
Gurd, S.8
Martin, N.W.9
Mallmin, H.10
-
13
-
-
77950339092
-
Integrating pathway analysis and genetics of gene expression for genome-wide association studies
-
Zhong, H., Yang, X., Kaplan, L.M., Molony, C. and Schadt, E.E. (2010) Integrating pathway analysis and genetics of gene expression for genome-wide association studies. Am. J. Hum. Genet., 86, 581-591.
-
(2010)
Am. J. Hum. Genet.
, vol.86
, pp. 581-591
-
-
Zhong, H.1
Yang, X.2
Kaplan, L.M.3
Molony, C.4
Schadt, E.E.5
-
14
-
-
77952367694
-
Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations
-
Nica, A.C., Montgomery, S.B., Dimas, A.S., Stranger, B.E., Beazley, C., Barroso, I. and Dermitzakis, E.T. (2010) Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations. PLoS Genet., 6, e1000895.
-
(2010)
PLoS Genet.
, vol.6
-
-
Nica, A.C.1
Montgomery, S.B.2
Dimas, A.S.3
Stranger, B.E.4
Beazley, C.5
Barroso, I.6
Dermitzakis, E.T.7
-
15
-
-
51849156965
-
Extreme clonality in lymphoblastoid cell lines with implications for allele specific expression analyses
-
Plagnol, V., Uz, E., Wallace, C., Stevens, H., Clayton, D., Ozcelik, T. and Todd, J.A. (2008) Extreme clonality in lymphoblastoid cell lines with implications for allele specific expression analyses. PLoS ONE, 3, e2966.
-
(2008)
PLoS ONE
, vol.3
-
-
Plagnol, V.1
Uz, E.2
Wallace, C.3
Stevens, H.4
Clayton, D.5
Ozcelik, T.6
Todd, J.A.7
-
16
-
-
70350651269
-
Global patterns of cis variation in human cells revealed by high-density allelic expression analysis
-
Ge, B., Pokholok, D.K., Kwan, T., Grundberg, E., Morcos, L., Verlaan, D.J., Le, J., Koka, V., Lam, K.C., Gagne, V. et al. (2009) Global patterns of cis variation in human cells revealed by high-density allelic expression analysis. Nat. Genet., 41, 1216-1222.
-
(2009)
Nat. Genet.
, vol.41
, pp. 1216-1222
-
-
Ge, B.1
Pokholok, D.K.2
Kwan, T.3
Grundberg, E.4
Morcos, L.5
Verlaan, D.J.6
Le, J.7
Koka, V.8
Lam, K.C.9
Gagne, V.10
-
17
-
-
69949176863
-
Common regulatory variation impacts gene expression in a cell type-dependent manner
-
Dimas, A.S., Deutsch, S., Stranger, B.E., Montgomery, S.B., Borel, C., Attar-Cohen, H., Ingle,C., Beazley, C.,Gutierrez Arcelus, M., Sekowska, M. et al. (2009) Common regulatory variation impacts gene expression in a cell type-dependent manner. Science, 325, 1246-1250.
-
(2009)
Science
, vol.325
, pp. 1246-1250
-
-
Dimas, A.S.1
Deutsch, S.2
Stranger, B.E.3
Montgomery, S.B.4
Borel, C.5
Attar-Cohen, H.6
Ingle, C.7
Beazley, C.8
Arcelus, M.G.9
Sekowska, M.10
-
18
-
-
77953194222
-
Liver and adipose expression associated SNPs are enriched for association to type 2 diabetes
-
Zhong, H., Beaulaurier, J., Lum, P.Y., Molony, C., Yang, X., Macneil, D.J., Weingarth, D.T., Zhang, B., Greenawalt, D., Dobrin, R. et al. (2010) Liver and adipose expression associated SNPs are enriched for association to type 2 diabetes. PLoS Genet., 6, e1000932.
-
(2010)
PLoS Genet.
, vol.6
-
-
Zhong, H.1
Beaulaurier, J.2
Lum, P.Y.3
Molony, C.4
Yang, X.5
Macneil, D.J.6
Weingarth, D.T.7
Zhang, B.8
Greenawalt, D.9
Dobrin, R.10
-
19
-
-
76049102972
-
Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing
-
Heap, G.A., Yang, J.H., Downes, K., Healy, B.C., Hunt, K.A., Bockett, N., Franke, L., Dubois, P.C., Mein, C.A., Dobson, R.J. et al. (2010) Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing. Hum. Mol. Genet., 19, 122-134.
-
(2010)
Hum. Mol. Genet.
, vol.19
, pp. 122-134
-
-
Heap, G.A.1
Yang, J.H.2
Downes, K.3
Healy, B.C.4
Hunt, K.A.5
Bockett, N.6
Franke, L.7
Dubois, P.C.8
Mein, C.A.9
Dobson, R.J.10
-
20
-
-
45149108420
-
Mapping the genetic architecture of gene expression in human liver
-
Schadt, E.E., Molony, C., Chudin, E., Hao, K., Yang, X., Lum, P.Y., Kasarskis, A., Zhang, B., Wang, S., Suver, C. et al. (2008) Mapping the genetic architecture of gene expression in human liver. PLoS Biol., 6, e107.
-
(2008)
PLoS Biol.
, vol.6
-
-
Schadt, E.E.1
Molony, C.2
Chudin, E.3
Hao, K.4
Yang, X.5
Lum, P.Y.6
Kasarskis, A.7
Zhang, B.8
Wang, S.9
Suver, C.10
-
21
-
-
77956637896
-
Genetics and beyond-the transcriptome of human monocytes and disease susceptibility
-
Zeller, T., Wild, P., Szymczak, S., Rotival, M., Schillert, A., Castagne, R., Maouche, S., Germain, M., Lackner, K., Rossmann, H. et al. (2010) Genetics and beyond-the transcriptome of human monocytes and disease susceptibility. PLoS ONE, 5, e10693.
-
(2010)
PLoS ONE
, vol.5
-
-
Zeller, T.1
Wild, P.2
Szymczak, S.3
Rotival, M.4
Schillert, A.5
Castagne, R.6
Maouche, S.7
Germain, M.8
Lackner, K.9
Rossmann, H.10
-
22
-
-
76249089640
-
Non-imprinted allele-specific DNA methylation on human autosomes
-
Zhang, Y., Rohde, C., Reinhardt, R., Voelcker-Rehage, C. and Jeltsch, A. (2009) Non-imprinted allele-specific DNA methylation on human autosomes. Genome Biol., 10, R138.
-
(2009)
Genome Biol.
, vol.10
-
-
Zhang, Y.1
Rohde, C.2
Reinhardt, R.3
Voelcker-Rehage, C.4
Jeltsch, A.5
-
23
-
-
76049126281
-
Allelic skewing of DNA methylation is widespread across the genome
-
Schalkwyk, L.C., Meaburn, E.L., Smith, R., Dempster, E.L., Jeffries, A.R., Davies, M.N., Plomin, R. and Mill, J. (2010) Allelic skewing of DNA methylation is widespread across the genome. Am. J. Hum. Genet., 86, 196-212.
-
(2010)
Am. J. Hum. Genet.
, vol.86
, pp. 196-212
-
-
Schalkwyk, L.C.1
Meaburn, E.L.2
Smith, R.3
Dempster, E.L.4
Jeffries, A.R.5
Davies, M.N.6
Plomin, R.7
Mill, J.8
-
24
-
-
33847304609
-
Gene body-specific methylation on the active X chromosome
-
Hellman, A. and Chess, A. (2007) Gene body-specific methylation on the active X chromosome. Science, 315, 1141-1143.
-
(2007)
Science
, vol.315
, pp. 1141-1143
-
-
Hellman, A.1
Chess, A.2
-
25
-
-
77954189998
-
Extensive sequence-influenced DNA methylation polymorphism in the human genome
-
Hellman, A. and Chess, A. (2010) Extensive sequence-influenced DNA methylation polymorphism in the human genome. Epigenetics Chromatin, 3, 11.
-
(2010)
Epigenetics Chromatin
, vol.3
, pp. 11
-
-
Hellman, A.1
Chess, A.2
-
26
-
-
70350716441
-
Allele-specific DNA methylation in mouse strains is mainly determined by cis-acting sequences
-
Schilling, E., El Chartouni, C. and Rehli, M. (2009) Allele-specific DNA methylation in mouse strains is mainly determined by cis-acting sequences. Genome Res., 19, 2028-2035.
-
(2009)
Genome Res.
, vol.19
, pp. 2028-2035
-
-
Schilling, E.1
Chartouni, C.E.2
Rehli, M.3
-
27
-
-
77949644954
-
Influence of genetic background and tissue types on global DNA methylation patterns
-
Yang, H.H., Hu, N., Wang, C., Ding, T., Dunn, B.K., Goldstein, A.M., Taylor, P.R. and Lee, M.P. (2010) Influence of genetic background and tissue types on global DNA methylation patterns. PLoS ONE, 5, e9355.
-
(2010)
PLoS ONE
, vol.5
-
-
Yang, H.H.1
Hu, N.2
Wang, C.3
Ding, T.4
Dunn, B.K.5
Goldstein, A.M.6
Taylor, P.R.7
Lee, M.P.8
-
28
-
-
77649204292
-
Genetic control of individual differences in gene-specific methylation in human brain
-
Zhang, D., Cheng, L., Badner, J.A., Chen, C., Chen, Q., Luo, W., Craig, D.W., Redman, M., Gershon, E.S. and Liu, C. (2010) Genetic control of individual differences in gene-specific methylation in human brain. Am. J. Hum. Genet., 86, 411-419.
-
(2010)
Am. J. Hum. Genet.
, vol.86
, pp. 411-419
-
-
Zhang, D.1
Cheng, L.2
Badner, J.A.3
Chen, C.4
Chen, Q.5
Luo, W.6
Craig, D.W.7
Redman, M.8
Gershon, E.S.9
Liu, C.10
-
29
-
-
77953223693
-
Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain
-
Gibbs, J.R., van der Brug, M.P., Hernandez, D.G., Traynor, B.J., Nalls, M.A., Lai, S.L., Arepalli, S., Dillman, A., Rafferty, I.P., Troncoso, J. et al. (2010) Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain. PLoS Genet., 6, e1000952.
-
(2010)
PLoS Genet.
, vol.6
-
-
Gibbs, J.R.1
Brug, M.P.V.D.2
Hernandez, D.G.3
Traynor, B.J.4
Nalls, M.A.5
Lai, S.L.6
Arepalli, S.7
Dillman, A.8
Rafferty, I.P.9
Troncoso, J.10
-
30
-
-
77954238686
-
Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome
-
Shoemaker, R., Deng, J., Wang, W. and Zhang, K. (2010) Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome. Genome Res., 20, 883-889.
-
(2010)
Genome Res.
, vol.20
, pp. 883-889
-
-
Shoemaker, R.1
Deng, J.2
Wang, W.3
Zhang, K.4
-
31
-
-
0032534028
-
The primary function of a redundant Sp1 binding site in the mouse aprt gene promoter is to block epigenetic gene inactivation
-
Mummaneni, P., Yates, P., Simpson, J., Rose, J. and Turker, M.S. (1998) The primary function of a redundant Sp1 binding site in the mouse aprt gene promoter is to block epigenetic gene inactivation. Nucleic Acids Res., 26, 5163-5169.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 5163-5169
-
-
Mummaneni, P.1
Yates, P.2
Simpson, J.3
Rose, J.4
Turker, M.S.5
-
32
-
-
0028104109
-
Sp1 elements protect a CpG island from de novo methylation
-
Brandeis, M., Frank, D., Keshet, I., Siegfried, Z., Mendelsohn, M., Nemes, A., Temper, V., Razin, A. and Cedar, H. (1994) Sp1 elements protect a CpG island from de novo methylation. Nature, 371, 435-438.
-
(1994)
Nature
, vol.371
, pp. 435-438
-
-
Brandeis, M.1
Frank, D.2
Keshet, I.3
Siegfried, Z.4
Mendelsohn, M.5
Nemes, A.6
Temper, V.7
Razin, A.8
Cedar, H.9
-
33
-
-
0035038209
-
Protein binding protects sites on stable episomes and in the chromosome from de novo methylation
-
Han, L., Lin, I.G. and Hsieh, C.L. (2001) Protein binding protects sites on stable episomes and in the chromosome from de novo methylation. Mol. Cell Biol., 21, 3416-3424.
-
(2001)
Mol. Cell Biol.
, vol.21
, pp. 3416-3424
-
-
Han, L.1
Lin, I.G.2
Hsieh, C.L.3
-
34
-
-
49149091892
-
The core element of a CpG island protects avian sarcoma and leukosis virus-derived vectors from transcriptional silencing
-
Senigl, F., Plachy, J. and Hejnar, J. (2008) The core element of a CpG island protects avian sarcoma and leukosis virus-derived vectors from transcriptional silencing. J. Virol., 82, 7818-7827.
-
(2008)
J. Virol.
, vol.82
, pp. 7818-7827
-
-
Senigl, F.1
Plachy, J.2
Hejnar, J.3
-
35
-
-
76749132083
-
General transcription factor binding at CpG islands in normal cells correlates with resistance to de novo DNA methylation in cancer cells
-
Gebhard, C., Benner, C., Ehrich, M., Schwarzfischer, L., Schilling, E., Klug, M., Dietmaier, W., Thiede, C., Holler, E., Andreesen, R. et al. (2010) General transcription factor binding at CpG islands in normal cells correlates with resistance to de novo DNA methylation in cancer cells. Cancer Res., 70, 1398-1407.
-
(2010)
Cancer Res.
, vol.70
, pp. 1398-1407
-
-
Gebhard, C.1
Benner, C.2
Ehrich, M.3
Schwarzfischer, L.4
Schilling, E.5
Klug, M.6
Dietmaier, W.7
Thiede, C.8
Holler, E.9
Andreesen, R.10
-
36
-
-
50849141092
-
An Sp1/Sp3 binding polymorphism confers methylation protection
-
Boumber, Y.A., Kondo, Y., Chen, X., Shen, L., Guo, Y., Tellez, C., Estecio, M.R., Ahmed, S. and Issa, J.P. (2008) An Sp1/Sp3 binding polymorphism confers methylation protection. PLoS Genet., 4, e1000162.
-
(2008)
PLoS Genet.
, vol.4
-
-
Boumber, Y.A.1
Kondo, Y.2
Chen, X.3
Shen, L.4
Guo, Y.5
Tellez, C.6
Estecio, M.R.7
Ahmed, S.8
Issa, J.P.9
-
37
-
-
77956683757
-
MeCP2 binds cooperatively to its substrate and competes with histone H1 for chromatin binding sites
-
[Epub ahead of print]
-
Ghosh, R.P., Horowitz-Scherer, R.A., Nikitina, T., Shlyakhtenko, L.S. and Woodcock, C.L. (2010) MeCP2 binds cooperatively to its substrate and competes with histone H1 for chromatin binding sites. Mol. Cell Biol. [Epub ahead of print].
-
(2010)
Mol. Cell Biol.
-
-
Ghosh, R.P.1
Horowitz-Scherer, R.A.2
Nikitina, T.3
Shlyakhtenko, L.S.4
Woodcock, C.L.5
-
38
-
-
23044463888
-
Chromosome loops, insulators, and histone methylation: new insights into regulation of imprinting in clusters
-
Reik, W., Murrell, A., Lewis, A., Mitsuya, K., Umlauf, D., Dean, W., Higgins, M. and Feil, R. (2004) Chromosome loops, insulators, and histone methylation: new insights into regulation of imprinting in clusters. Cold Spring Harb. Symp. Quant. Biol., 69, 29-37.
-
(2004)
Cold Spring Harb. Symp. Quant. Biol.
, vol.69
, pp. 29-37
-
-
Reik, W.1
Murrell, A.2
Lewis, A.3
Mitsuya, K.4
Umlauf, D.5
Dean, W.6
Higgins, M.7
Feil, R.8
-
39
-
-
34147207047
-
Allele-specific binding of CTCF to the multipartite imprinting control region KvDMR1
-
Fitzpatrick, G.V., Pugacheva, E.M., Shin, J.Y., Abdullaev, Z., Yang, Y., Khatod, K., Lobanenkov, V.V. and Higgins, M.J. (2007) Allele-specific binding of CTCF to the multipartite imprinting control region KvDMR1. Mol. Cell Biol., 27, 2636-2647.
-
(2007)
Mol. Cell Biol.
, vol.27
, pp. 2636-2647
-
-
Fitzpatrick, G.V.1
Pugacheva, E.M.2
Shin, J.Y.3
Abdullaev, Z.4
Yang, Y.5
Khatod, K.6
Lobanenkov, V.V.7
Higgins, M.J.8
-
40
-
-
4444365791
-
Microdeletions in the human H19 DMR result in loss of IGF2 imprinting and Beckwith-Wiedemann syndrome
-
Sparago, A., Cerrato, F., Vernucci, M., Ferrero, G.B., Silengo, M.C. and Riccio, A. (2004) Microdeletions in the human H19 DMR result in loss of IGF2 imprinting and Beckwith-Wiedemann syndrome. Nat. Genet., 36, 958-960.
-
(2004)
Nat. Genet.
, vol.36
, pp. 958-960
-
-
Sparago, A.1
Cerrato, F.2
Vernucci, M.3
Ferrero, G.B.4
Silengo, M.C.5
Riccio, A.6
-
41
-
-
77950854479
-
Heritable individual-specific and allele-specific chromatin signatures in humans
-
McDaniell, R., Lee, B.K., Song, L., Liu, Z., Boyle, A.P., Erdos, M.R., Scott, L.J., Morken, M.A., Kucera, K.S., Battenhouse, A. et al. (2010) Heritable individual-specific and allele-specific chromatin signatures in humans. Science, 328, 235-239.
-
(2010)
Science
, vol.328
, pp. 235-239
-
-
Mcdaniell, R.1
Lee, B.K.2
Song, L.3
Liu, Z.4
Boyle, A.P.5
Erdos, M.R.6
Scott, L.J.7
Morken, M.A.8
Kucera, K.S.9
Battenhouse, A.10
-
42
-
-
76049095642
-
Mapping allele-specific DNA methylation: a new tool for maximizing information from GWAS
-
Tycko, B. (2010) Mapping allele-specific DNA methylation: a new tool for maximizing information from GWAS. Am. J. Hum. Genet., 86, 109-112.
-
(2010)
Am. J. Hum. Genet.
, vol.86
, pp. 109-112
-
-
Tycko, B.1
-
43
-
-
58149330480
-
Using gene expression to investigate the genetic basis of complex disorders
-
Nica, A.C. and Dermitzakis, E.T. (2008) Using gene expression to investigate the genetic basis of complex disorders. Hum. Mol. Genet., 17, R129-134.
-
(2008)
Hum. Mol. Genet.
, vol.17
-
-
Nica, A.C.1
Dermitzakis, E.T.2
-
44
-
-
58149357365
-
Genome-wide association studies in cancer
-
Easton, D.F. and Eeles, R.A. (2008) Genome-wide association studies in cancer. Hum. Mol. Genet., 17, R109-115.
-
(2008)
Hum. Mol. Genet.
, vol.17
-
-
Easton, D.F.1
Eeles, R.A.2
-
45
-
-
58149333555
-
Autoimmune diseases: insights from genome-wide association studies
-
Lettre, G. and Rioux, J.D. (2008) Autoimmune diseases: insights from genome-wide association studies. Hum. Mol. Genet., 17, R116-121.
-
(2008)
Hum. Mol. Genet.
, vol.17
-
-
Lettre, G.1
Rioux, J.D.2
-
46
-
-
33846010742
-
Localization of a long-range cis-regulatory element of IL13 by allelic transcript ratio mapping
-
Forton, J.T., Udalova, I.A., Campino, S., Rockett, K.A., Hull, J. and Kwiatkowski, D.P. (2007) Localization of a long-range cis-regulatory element of IL13 by allelic transcript ratio mapping. Genome Res., 17, 82-87.
-
(2007)
Genome Res.
, vol.17
, pp. 82-87
-
-
Forton, J.T.1
Udalova, I.A.2
Campino, S.3
Rockett, K.A.4
Hull, J.5
Kwiatkowski, D.P.6
-
47
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner, A., Mikkelsen, T.S., Gu, H., Wernig, M., Hanna, J., Sivachenko, A., Zhang, X., Bernstein, B.E., Nusbaum, C., Jaffe, D.B. et al. (2008) Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature, 454, 766-770.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
-
48
-
-
57149104184
-
Digital PCR: a powerful new tool for noninvasive prenatal diagnosis? Prenat.
-
Zimmermann, B.G., Grill, S., Holzgreve, W., Zhong, X.Y., Jackson, L.G. and Hahn, S. (2008) Digital PCR: a powerful new tool for noninvasive prenatal diagnosis? Prenat. Diagn., 28, 1087-1093.
-
(2008)
Diagn.
, vol.28
, pp. 1087-1093
-
-
Zimmermann, B.G.1
Grill, S.2
Holzgreve, W.3
Zhong, X.Y.4
Jackson, L.G.5
Hahn, S.6
-
49
-
-
70449339945
-
Microdroplet-based PCR enrichment for large-scale targeted sequencing
-
Tewhey, R., Warner, J.B., Nakano, M., Libby, B., Medkova, M., David, P.H., Kotsopoulos, S.K., Samuels, M.L., Hutchison, J.B., Larson, J.W. et al. (2009) Microdroplet-based PCR enrichment for large-scale targeted sequencing. Nat. Biotechnol., 27, 1025-1031.
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 1025-1031
-
-
Tewhey, R.1
Warner, J.B.2
Nakano, M.3
Libby, B.4
Medkova, M.5
David, P.H.6
Kotsopoulos, S.K.7
Samuels, M.L.8
Hutchison, J.B.9
Larson, J.W.10
-
50
-
-
61449165662
-
Direct determination of haplotypes from single DNA molecules
-
Xiao, M., Wan, E., Chu, C., Hsueh, W.C., Cao, Y. and Kwok, P.Y. (2009) Direct determination of haplotypes from single DNA molecules. Nat. Methods, 6, 199-201.
-
(2009)
Nat. Methods
, vol.6
, pp. 199-201
-
-
Xiao, M.1
Wan, E.2
Chu, C.3
Hsueh, W.C.4
Cao, Y.5
Kwok, P.Y.6
-
51
-
-
33745210559
-
Genetic variation in human gene expression
-
Dermitzakis, E.T. and Stranger, B.E. (2006) Genetic variation in human gene expression. Mamm. Genome, 17, 503-508.
-
(2006)
Mamm. Genome
, vol.17
, pp. 503-508
-
-
Dermitzakis, E.T.1
Stranger, B.E.2
-
52
-
-
7444235907
-
Cis-acting regulatory variation in the human genome
-
Pastinen, T. and Hudson, T.J. (2004) Cis-acting regulatory variation in the human genome. Science, 306, 647-650.
-
(2004)
Science
, vol.306
, pp. 647-650
-
-
Pastinen, T.1
Hudson, T.J.2
-
53
-
-
40149090710
-
Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression
-
Serre, D., Gurd, S., Ge, B., Sladek, R., Sinnett, D., Harmsen, E., Bibikova, M., Chudin, E., Barker, D.L., Dickinson, T. et al. (2008) Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression. PLoS Genet., 4, e1000006.
-
(2008)
PLoS Genet.
, vol.4
-
-
Serre, D.1
Gurd, S.2
Ge, B.3
Sladek, R.4
Sinnett, D.5
Harmsen, E.6
Bibikova, M.7
Chudin, E.8
Barker, D.L.9
Dickinson, T.10
-
54
-
-
68349089152
-
Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human
-
Zhang, K., Li, J.B., Gao, Y., Egli, D., Xie, B., Deng, J., Li, Z., Lee, J.H., Aach, J., Leproust, E.M. et al. (2009) Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human. Nat. Methods, 6, 613-618.
-
(2009)
Nat. Methods
, vol.6
, pp. 613-618
-
-
Zhang, K.1
Li, J.B.2
Gao, Y.3
Egli, D.4
Xie, B.5
Deng, J.6
Li, Z.7
Lee, J.H.8
Aach, J.9
Leproust, E.M.10
-
55
-
-
55449112185
-
Genome-wide associations of gene expression variation in humans
-
Stranger, B.E., Forrest, M.S., Clark, A.G., Minichiello, M.J., Deutsch, S., Lyle, R., Hunt, S., Kahl, B., Antonarakis, S.E., Tavare, S. et al. (2005) Genome-wide associations of gene expression variation in humans. PLoS Genet., 1, e78.
-
(2005)
PLoS Genet.
, vol.1
-
-
Stranger, B.E.1
Forrest, M.S.2
Clark, A.G.3
Minichiello, M.J.4
Deutsch, S.5
Lyle, R.6
Hunt, S.7
Kahl, B.8
Antonarakis, S.E.9
Tavare, S.10
-
56
-
-
33846631884
-
Common genetic variants account for differences in gene expression among ethnic groups
-
Spielman, R.S., Bastone, L.A., Burdick, J.T., Morley, M., Ewens, W.J. and Cheung, V.G. (2007) Common genetic variants account for differences in gene expression among ethnic groups. Nat. Genet., 39, 226-231.
-
(2007)
Nat. Genet.
, vol.39
, pp. 226-231
-
-
Spielman, R.S.1
Bastone, L.A.2
Burdick, J.T.3
Morley, M.4
Ewens, W.J.5
Cheung, V.G.6
-
57
-
-
33847181678
-
Gene-expression variation within and among human populations
-
Storey, J.D., Madeoy, J., Strout, J.L., Wurfel, M., Ronald, J. and Akey, J.M. (2007) Gene-expression variation within and among human populations. Am. J. Hum. Genet., 80, 502-509.
-
(2007)
Am. J. Hum. Genet.
, vol.80
, pp. 502-509
-
-
Storey, J.D.1
Madeoy, J.2
Strout, J.L.3
Wurfel, M.4
Ronald, J.5
Akey, J.M.6
-
58
-
-
34548719076
-
Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes
-
Goring, H.H., Curran, J.E., Johnson, M.P., Dyer, T.D., Charlesworth, J., Cole, S.A., Jowett, J.B., Abraham, L.J., Rainwater, D.L., Comuzzie, A.G. et al. (2007) Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes. Nat. Genet., 39, 1208-1216.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1208-1216
-
-
Goring, H.H.1
Curran, J.E.2
Johnson, M.P.3
Dyer, T.D.4
Charlesworth, J.5
Cole, S.A.6
Jowett, J.B.7
Abraham, L.J.8
Rainwater, D.L.9
Comuzzie, A.G.10
-
59
-
-
41349095280
-
Genetics of gene expression and its effect on disease
-
Emilsson, V., Thorleifsson, G., Zhang, B., Leonardson, A.S., Zink, F., Zhu, J., Carlson, S., Helgason, A., Walters, G.B., Gunnarsdottir, S. et al. (2008) Genetics of gene expression and its effect on disease. Nature, 452, 423-428.
-
(2008)
Nature
, vol.452
, pp. 423-428
-
-
Emilsson, V.1
Thorleifsson, G.2
Zhang, B.3
Leonardson, A.S.4
Zink, F.5
Zhu, J.6
Carlson, S.7
Helgason, A.8
Walters, G.B.9
Gunnarsdottir, S.10
-
60
-
-
34249725088
-
Allele-specific chromatin immunoprecipitation studies show genetic influence on chromatin state in human genome
-
Kadota, M., Yang, H.H., Hu, N., Wang, C., Hu, Y., Taylor, P.R., Buetow, K.H. and Lee, M.P. (2007) Allele-specific chromatin immunoprecipitation studies show genetic influence on chromatin state in human genome. PLoS Genet., 3, e81.
-
(2007)
PLoS Genet.
, vol.3
-
-
Kadota, M.1
Yang, H.H.2
Hu, N.3
Wang, C.4
Hu, Y.5
Taylor, P.R.6
Buetow, K.H.7
Lee, M.P.8
-
61
-
-
41449117097
-
Genome-wide mapping of allele-specific protein-DNA interactions in human cells
-
Maynard, N.D., Chen, J., Stuart, R.K., Fan, J.B. and Ren, B. (2008) Genome-wide mapping of allele-specific protein-DNA interactions in human cells. Nat. Methods, 5, 307-309.
-
(2008)
Nat. Methods
, vol.5
, pp. 307-309
-
-
Maynard, N.D.1
Chen, J.2
Stuart, R.K.3
Fan, J.B.4
Ren, B.5
-
62
-
-
0037381011
-
In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading
-
Knight, J.C., Keating, B.J., Rockett, K.A. and Kwiatkowski, D.P. (2003) In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading. Nat. Genet., 33, 469-475.
-
(2003)
Nat. Genet.
, vol.33
, pp. 469-475
-
-
Knight, J.C.1
Keating, B.J.2
Rockett, K.A.3
Kwiatkowski, D.P.4
-
63
-
-
77950833803
-
Variation in transcription factor binding among humans
-
Kasowski, M., Grubert, F., Heffelfinger, C., Hariharan, M., Asabere, A., Waszak, S.M., Habegger, L., Rozowsky, J., Shi, M., Urban, A.E. et al. (2010) Variation in transcription factor binding among humans. Science, 328, 232-235.
-
(2010)
Science
, vol.328
, pp. 232-235
-
-
Kasowski, M.1
Grubert, F.2
Heffelfinger, C.3
Hariharan, M.4
Asabere, A.5
Waszak, S.M.6
Habegger, L.7
Rozowsky, J.8
Shi, M.9
Urban, A.E.10
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