"Mycobacterium avium subsp. hominissuis" in neck lymph nodes of children and their environment examined by culture and triplex quantitative real-time PCR

Journal of Clinical Microbiology

Volumn 49, Issue 1, 2011, Pages 167-172

  Kaevska, Marija ^a   Slana, Iva ^a   Kralik, Petr ^a   Reischl, Udo ^b   Orosova, Jaroslava ^c   Holcikova, Alena ^d   Pavlik, Ivo ^a  

^a VETERINARY RESEARCH INSTITUTE   (Czech Republic)

^b UNIVERSITY OF REGENSBURG   (Germany)

^c Faculty of Natural Sciences   (Slovakia)

^d UNIVERSITY HOSPITAL BRNO   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM CULTURE; CASE REPORT; CERVICAL LYMPH NODE; CHILD; COMPOST; DISEASE PREDISPOSITION; DNA ISOLATION; DUST; ENVIRONMENTAL FACTOR; FEMALE; HUMAN; LYMPH NODE BIOPSY; LYMPHADENITIS; MALE; MYCOBACTERIUM AVIUM; MYCOBACTERIUM HOMINISSUIS; PRESCHOOL CHILD; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; SCHOOL CHILD; SOIL;

BACTERIOLOGICAL TECHNIQUES; CHILD; CHILD, PRESCHOOL; ENVIRONMENTAL MICROBIOLOGY; FEMALE; HUMANS; MALE; MOLECULAR TYPING; MYCOBACTERIUM AVIUM; NECK; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; TUBERCULOSIS, LYMPH NODE;

MYCOBACTERIUM AVIUM;

EID: 78650869972     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00802-10     Document Type: Article

References (56)

1. Bartos, M., et al. 2006. Identification of members of Mycobacterium avium species by Accu-Probes, serotyping, and single IS900, IS901, IS1245 and IS901-flanking region PCR with internal standards. J. Microbiol. Methods 64:333-345.
2. Beran, V., M. Havelkova, J. Kaustova, L. Dvorska, and I. Pavlik. 2006. Cell wall deficient forms of mycobacteria: a review. Veterinarni Medicina 51:365-389.
3. Blyth, C. C., et al. 2009. Nontuberculous mycobacterial infection in children: a prospective national study. Pediatr. Infect. Dis. J. 28:801-805.
4. Brooks, R. W., K. L. George, B. C. Parker, J. O. Falkinham, and H. Gruft. 1984. Recovery and survival of nontuberculous mycobacteria under various growth and decontamination conditions. Can. J. Microbiol. 30:1112-1117.
5. Choi, P., et al. 2009. Polymerase chain reaction for pathogen identification in persistent pediatric cervical lymphadenitis. Arch. Otolaryngol. Head Neck Surg. 135:243-248.
6. Covert, T. C., M. R. Rodgers, A. L. Reyes, and G. N. Stelma. 1999. Occurrence of nontuberculous mycobacteria in environmental samples. Appl. Environ. Microbiol. 65:2492-2496.
7. De Groote, M. A., N. R. Pace, K. Fulton, and J. O. Falkinham. 2006. Relationships between Mycobacterium isolates from patients with pulmonary mycobacterial infection and potting soils. Appl. Environ. Microbiol. 72:7602-7606.
8. Dhand, N. K., J. A. L. M. Toribio, and R. J. Whittington. 2009. Adsorption of Mycobacterium avium subsp. paratuberculosis to soil particles. Appl. Environ. Microbiol. 75:5581-5585.
9. Domingos, M., A. Amado, and A. Botelho. 2009. IS1245 RFLP analysis of strains of Mycobacterium avium subspecies hominissuis isolated from pigs with tuberculosis lymphadenitis in Portugal. Vet. Rec. 164:116-120.
10. Dvorska, L., M. Bartos, G. Martin, W. Erler, and I. Pavlik. 2001. Strategies for differentiation, identification and typing of medically important species of mycobacteria by molecular methods. Veterinarni Medicina 46:309-328.
11. Dvorska, L., et al. 2007. Avian tuberculosis in naturally infected captive water birds of the Ardeideae and Threskiornithidae families studied by serotyping, IS901 RFLP typing, and virulence for poultry. Vet. Microbiol. 119:366-374.
12. Dvorska, L., et al. 2004. Study of Mycobacterium avium complex strains isolated from cattle in the Czech Republic between 1996 and 2000. Vet. Microbiol. 99:239-250.
13. Eriksson, M., R. Bennet, and N. Danielsson. 2001. Non-tuberculous mycobacterial lymphadenitis in healthy children: another "lifestyle disease"? Acta Paediatr. 90:1340-1342.
14. Espy, M. J., et al. 2006. Real-time PCR in clinical microbiology: applications for a routine laboratory testing. Clin. Microbiol. Rev. 19:165-256.
15. Falkinham, J. O., III. 2002. Nontuberculous mycobacteria in the environment. Clin. Chest Med. 23:529-551.
16. Falkinham, J. O. 2009. Surrounded by mycobacteria: nontuberculous mycobacteria in the human environment. J. Appl. Microbiol. 107:356-367.
17. Falkinham, J. O., M. D. Iseman, P. de Haas, and D. van Soolingen. 2008. Mycobacterium avium in a shower linked to pulmonary disease. J. Water Health 6:209-213.
18. Fischer, O., et al. 2001. Diptera as vectors of mycobacterial infections in cattle and pigs. Med. Vet. Entomol. 15:208-211.
19. Fischer, O. A., et al. 2004. Beetles as possible vectors of infections caused by Mycobacterium avium species. Vet. Microbiol. 102:247-255.
20. Guerrero, C., C. Bernasconi, D. Burki, T. Bodmer, and A. Telenti. 1995. A novel insertion element from Mycobacterium-avium, IS1245, is a specific target for analysis of strain relatedness. J. Clin. Microbiol. 33:304-307.
21. Harmsen, D., et al. 2003. RIDOM: comprehensive and public sequence database for identification of Mycobacterium species. BMC Infect. Dis. 3:26.
22. Inderlied, C. B., C. A. Kemper, and L. E. M. Bermudez. 1993. The Mycobacterium avium complex. Clin. Microbiol. Rev. 6:266-310.
23. Johansen, T. B., et al. 2007. New probes used for IS1245 and IS1311 restriction fragment length polymorphism of Mycobacterium avium subsp. avium and Mycobacterium avium subsp. hominissuis isolates of human and animal origin in Norway. BMC Microbiol. 7:14.
24. Kaevska, M., I. Slana, P. Kralik, and I. Pavlik. 2010. Examination of Mycobacterium avium subsp. avium distribution in naturally infected hens by culture and triplex quantitative real time PCR. Veterinarni Medicina 55:325-330.
25. Kazda, J., I. Pavlik, J. O. Falkinham III, and K. Hruska. 2009. The ecology of mycobacteria: impact on animal's and human's health. Springer, Bertlin, Germany.
26. Kubin, M., E. Wisingerova, J. Pekarek, and B. Prochazka. 1986. The patterns of complex and partially purified mycobacterial antigens in macrophage-migration inhibition testing. Zentralbl. Bakteriol. Mikrobiol. Hyg. A 261:362-369.
27. Kuth, G., J. Lamprecht, and G. Haase. 1995. Cervical lymphadenitis due to mycobacteria other than tuberculosis - an emerging problem in children. ORL J. Otorhinolaryngol. Relat. Spec. 57:36-38.
28. Lim, S. Y., B. J. Kim, M. K. Lee, and K. Kim. 2008. Development of a real-time PCR-based method for rapid differential identification of Mycobacterium species. Lett. Appl. Microbiol. 46:101-106.
29. Matlova, L., et al. 2004. Impact of sawdust and wood shavings in bedding on pig tuberculous lesions in lymph nodes, and IS1245 RFLP analysis of Mycobacterium avium subsp. hominissuis of serotypes 6 and 8 isolated from pigs and environment. Vet. Microbiol. 102:227-236.
30. Mendum, T. A., B. Z. Chilima, and P. R. Hirsch. 2000. The PCR amplification of non-tuberculous mycobacterial 16S rRNA sequences from soil. FEMS Microbiol. Lett. 185:189-192.
31. Mijs, W., et al. 2002. Molecular evidence to support a proposal to reserve the designation Mycobacterium avium subsp. avium for bird-type isolates and 'M. avium subsp. hominissuis' for the human/porcine type of M. avium. Int. J. Syst. Evol. Microbiol. 52:1505-1518.
32. Moravkova, M., et al. 2008. Strategy for the detection and differentiation of Mycobacterium avium species in isolates and heavily infected tissues. Res. Vet. Sci. 85:257-264.
33. Nieminen, T., et al. 2006. 16S rRNA targeted sandwich hybridization method for direct quantification of mycobacteria in soils. J. Microbiol. Methods 67:44-55.
34. Pakarinen, J., et al. 2007. Proliferation of mycobacteria in a piggery environment revealed by Mycobacterium-specific real-time quantitative PCR and 16S rRNA sandwich hybridization. Vet. Microbiol. 120:105-112.
35. Pavlik, I., P. Svastova, J. Bartl, L. Dvorska, and I. Rychlik. 2000. Relationship between IS901 in the Mycobacterium avium complex strains isolated from birds, animals, humans, and the environment and virulence for poultry. Clin. Diagn. Lab. Immunol. 7:212-217.
36. Primm, T. P., C. A. Lucero, and J. O. Falkinham. 2004. Health impacts of environmental mycobacteria. Clin. Microbiol. Rev. 17:98-106.
37. Reddy, V. C. K., et al. 2008. Mycobacterial culture of fine needle aspirate - a useful tool in diagnosing tuberculous lymphadenitis. Indian J. Med. Microbiol. 26:259-261.
38. Reed, C., et al. 2006. Environmental risk factors for infection with Mycobacterium avium complex. Am. J. Epidemiol. 164:32-40.
39. Rhodes, G., et al. 2008. Detection of Mycobacterium immunogenum by realtime quantitative Taqman PCR. J. Microbiol. Methods 73:266-268.
40. Shitaye, E. J., et al. 2009. Comparison of the conventional culture, the manual fluorescent MGIT system and the automated fluorescent MGIT 960 culture system for the detection of Mycobacterium avium ssp avium in tissues of naturally infected hens. Folia Microbiol. 54:137-141.
41. Shitaye, J. E., et al. 2008. Diagnostic testing of different stages of avian tuberculosis in naturally infected hens (Gallus domesticus) by the tuberculin skin and rapid agglutination tests, faecal and egg examinations. Veterinarni Medicina 53:101-110.
42. Shitaye, J. E., et al. 2008. Mycobacterium avium subsp. avium distribution studied in a naturally infected hen flock and in the environment by culture, serotyping and IS901 RFLP methods. Vet. Microbiol. 127:155-164.
43. Shitaye, J. E., et al. 2006. Mycobacterial and Rhodococcus equi infections in pigs in the Czech Republic between the years 1996 and 2004: the causal factors and distribution of infections in the tissues. Veterinarni Medicina 51:497-511.
44. Shrestha, N. K., et al. 2003. Detection and differentiation of Mycobacterium tuberculosis and nontuberculous mycobacterial isolates by real-time PCR. J. Clin. Microbiol. 41:5121-5126.
45. Slana, I., M. Kaevska, P. Kralik, A. Horvathova, and I. Pavlik. 2010. Distribution of Mycobacterium avium subsp. avium and M. a. hominissuis in artificially infected pigs studied by culture and IS901 and IS1245 quantitative real time PCR. Vet. Microbiol. 144:437-443.
46. Slana, I., P. Kralik, A. Kralova, and I. Pavlik. 2008. On-farm spread of Mycobacterium avium subsp. paratuberculosis in raw milk studied by IS900 and F57 competitive real time quantitative PCR and culture examination. Int. J. Food Microbiol. 128:250-257.
47. Tell, L. A., et al. 2003. Real-time polymerase chain reaction testing for the detection of Mycobacterium genavense and Mycobacterium avium complex species in avian samples. Avian Dis. 47:1406-1415.
48. Trevors, J. T. 1996. Nucleic acids in the environment. Curr. Opin. Biotechnol. 7:331-336.
49. van Coppenraet, E. S. B., et al. 2004. Real-time PCR assay using fine-needle aspirates and tissue biopsy specimens for rapid diagnosis of mycobacterial lymphadenitis in children. J. Clin. Microbiol. 42:2644-2650.
50. van Coppenraet, L. E. S. B., P. E. W. de Haas, J. A. Lindeboom, E. J. Kuijper, and D. van Soolingen. 2008. Lymphadenitis in children is caused by Mycobacterium avium hominissuis and not related to 'bird tuberculosis'. Eur. J. Clin. Microbiol. Infect. Dis. 27:293-299.
51. van Soolingen, D., et al. 1998. IS1245 restriction fragment length polymorphism typing of Mycobacterium avium isolates: proposal for standardization. J. Clin. Microbiol. 36:3051-3054.
52. van Soolingen, D., P. E. de Haas, P. W. Hermans, and J. D. van Embden. 1994. DNA fingerprinting of Mycobacterium tuberculosis. Methods Enzymol. 235:196-205.
53. Wagner, D., and L. S. Young. 2004. Nontuberculous mycobacterial infections: a clinical review. Infection 32:257-270.
54. Wolinsky, E., and W. B. Schaefer. 1973. Proposed numbering scheme for mycobacterial serotypes by agglutination. Int. J. Syst. Bacteriol. 23:182-183.
55. Wright, C. A., K. G. Hoek, B. J. Marais, P. van Helden, and R. M. Warren. 2010. Combining fine-needle aspiration biopsy (FNAB) and high-resolution melt analysis to reduce diagnostic delay in mycobacterial lymphadenitis. Diagn. Cytopathol. 38:482-488.
56. Yajko, D. M., et al. 1995. Mycobacterium avium complex in water, food, and soil samples collected from the environment of HIV-infected individuals. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 9:176-182.