Reconstructed ancestral sequences improve pathogen identification using resequencing DNA microarrays

PLoS ONE

Volumn 5, Issue 12, 2010, Pages

  Berthet, Nicolas ^a   Deletoile, Alexis ^a   Passet, Virginie ^a   Kennedy, Giulia C ^b   Manuguerra, Jean Claude ^a   Cole, Stewart T ^c   Brisse, Sylvain ^a  

^a INSTITUT PASTEUR   (France)

^b Thermo Fisher Scientific   (United States)

^c EPFL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S; RNA POLYMERASE; RNA POLYMERASE BETA SUBUNIT; ANTIINFECTIVE AGENT; BACTERIAL PROTEIN; ESCHERICHIA COLI PROTEIN; RPOB PROTEIN, E COLI;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL STRAIN; CONTROLLED STUDY; DNA HYBRIDIZATION; DNA MICROARRAY; DNA SEQUENCE; ENTEROBACTERIACEAE; GENE CONSTRUCT; MICROARRAY ANALYSIS; MICROORGANISM DETECTION; NONHUMAN; OLIGONUCLEOTIDE PROBE; PHYLOGENY; QUANTITATIVE ANALYSIS; YERSINIA PESTIS; YERSINIA PSEUDOTUBERCULOSIS; ANTIBIOTIC RESISTANCE; BACTERIAL GENE; BACTERIUM IDENTIFICATION; BIOLOGICAL MODEL; CHEMISTRY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; METHODOLOGY; MOLECULAR EVOLUTION; NUCLEIC ACID HYBRIDIZATION; PROTEIN DATABASE;

ENTEROBACTERIACEAE;

ANTI-BACTERIAL AGENTS; BACTERIAL PROTEINS; BACTERIAL TYPING TECHNIQUES; DATABASES, PROTEIN; DRUG RESISTANCE, BACTERIAL; ENTEROBACTERIACEAE; ESCHERICHIA COLI PROTEINS; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; MODELS, GENETIC; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

EID: 78650856532     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0015243     Document Type: Article

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