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Volumn 84, Issue 18, 2010, Pages 9557-9574

Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE; VIRUS RNA;

EID: 77956032257     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.00771-10     Document Type: Article
Times cited : (45)

References (49)
  • 4
    • 2942527326 scopus 로고    scopus 로고
    • Oligonucleotide microarrays in microbial diagnostics
    • Bodrossy, L., and A. Sessitsch. 2004. Oligonucleotide microarrays in microbial diagnostics. Curr. Opin. Microbiol. 7:245-254.
    • (2004) Curr. Opin. Microbiol. , vol.7 , pp. 245-254
    • Bodrossy, L.1    Sessitsch, A.2
  • 6
    • 26244450003 scopus 로고    scopus 로고
    • Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene
    • Bourhy, H., J. A. Cowley, F. Larrous, E. C. Holmes, and P. J. Walker. 2005. Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene. J. Gen. Virol. 86:2849-2858.
    • (2005) J. Gen. Virol. , vol.86 , pp. 2849-2858
    • Bourhy, H.1    Cowley, J.A.2    Larrous, F.3    Holmes, E.C.4    Walker, P.J.5
  • 7
    • 77954946466 scopus 로고    scopus 로고
    • Animal rhabdoviruses
    • B. W. J. Mahy and M. H. V. Van Regenmortel (ed.), Elsevier, Oxford, United Kingdom
    • Bourhy, H., A. Gubala, R. P. Weir, and D. Boyle. 2008. Animal rhabdoviruses, p. 111-121. In B. W. J. Mahy and M. H. V. Van Regenmortel (ed.), Encyclopedia of virology, vol. 1. Elsevier, Oxford, United Kingdom.
    • (2008) Encyclopedia of Virology , vol.1 , pp. 111-121
    • Bourhy, H.1    Gubala, A.2    Weir, R.P.3    Boyle, D.4
  • 8
    • 0024513364 scopus 로고
    • Comparative field evaluation of the fluorescent-antibody test, virus isolation from tissue culture, and enzyme immunodiagnosis for rapid laboratory diagnosis of rabies
    • Bourhy, H., P. E. Rollin, J. Vincent, and P. Sureau. 1989. Comparative field evaluation of the fluorescent-antibody test, virus isolation from tissue culture, and enzyme immunodiagnosis for rapid laboratory diagnosis of rabies. J. Clin. Microbiol. 27:519-523.
    • (1989) J. Clin. Microbiol. , vol.27 , pp. 519-523
    • Bourhy, H.1    Rollin, P.E.2    Vincent, J.3    Sureau, P.4
  • 16
    • 84984934752 scopus 로고    scopus 로고
    • Resequencing and mutational analysis using oligonucleotide microarrays
    • Hacia, J. G. 1999. Resequencing and mutational analysis using oligonucleotide microarrays. Nat. Genet. 21:42-47.
    • (1999) Nat. Genet. , vol.21 , pp. 42-47
    • Hacia, J.G.1
  • 17
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 18
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 19
    • 34548514438 scopus 로고    scopus 로고
    • Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and human rhinovirus diversity
    • Kistler, A., P. C. Avila, S. Rouskin, D. Wang, T. Ward, S. Yagi, D. Schnurr, D. Ganem, J. L. DeRisi, and H. A. Boushey. 2007. Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and human rhinovirus diversity. J. Infect. Dis. 196:817-825.
    • (2007) J. Infect. Dis. , vol.196 , pp. 817-825
    • Kistler, A.1    Avila, P.C.2    Rouskin, S.3    Wang, D.4    Ward, T.5    Yagi, S.6    Schnurr, D.7    Ganem, D.8    DeRisi, J.L.9    Boushey, H.A.10
  • 20
    • 33746781663 scopus 로고    scopus 로고
    • Orchid fleck virus is a rhabdovirus with an unusual bipartite genome
    • Kondo, H., T. Maeda, Y. Shirako, and T. Tamada. 2006. Orchid fleck virus is a rhabdovirus with an unusual bipartite genome. J. Gen. Virol. 87:2413-2421.
    • (2006) J. Gen. Virol. , vol.87 , pp. 2413-2421
    • Kondo, H.1    Maeda, T.2    Shirako, Y.3    Tamada, T.4
  • 22
    • 33746804078 scopus 로고    scopus 로고
    • Phylogenetic relationships of seven previously unclassified viruses within the family Rhabdoviridae using partial nucleoprotein gene sequences
    • Kuzmin, I. V., G. J. Hughes, and C. E. Rupprecht. 2006. Phylogenetic relationships of seven previously unclassified viruses within the family Rhabdoviridae using partial nucleoprotein gene sequences. J. Gen. Virol. 87:2323-2331.
    • (2006) J. Gen. Virol. , vol.87 , pp. 2323-2331
    • Kuzmin, I.V.1    Hughes, G.J.2    Rupprecht, C.E.3
  • 27
    • 73949087241 scopus 로고    scopus 로고
    • Sigma viruses from three species of Drosophila form a major new clade in the rhabdovirus phylogeny
    • Longdon, B., D. J. Obbard, and F. M. Jiggins. 2010. Sigma viruses from three species of Drosophila form a major new clade in the rhabdovirus phylogeny. Proc. Biol. Sci. 277:35-44.
    • (2010) Proc. Biol. Sci. , vol.277 , pp. 35-44
    • Longdon, B.1    Obbard, D.J.2    Jiggins, F.M.3
  • 28
    • 0031127678 scopus 로고    scopus 로고
    • Filovirus-like particles detected in the leafhopper Psammotettix alienus
    • DOI 10.1016/S0168-1702(96)01431-1, PII S0168170296014311
    • Lundsgaard, T. 1997. Filovirus-like particles detected in the leafhopper Psammotettix alienus. Virus Res. 48:35-40. (Pubitemid 27163267)
    • (1997) Virus Research , vol.48 , Issue.1 , pp. 35-40
    • Lundsgaard, T.1
  • 29
    • 33750985091 scopus 로고    scopus 로고
    • Automated identification of multiple micro-organisms from resequencing DNA microarrays
    • Malanoski, A. P., B. Lin, Z. Wang, J. M. Schnur, and D. A. Stenger. 2006. Automated identification of multiple micro-organisms from resequencing DNA microarrays. Nucleic Acids Res. 34:5300-5311.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 5300-5311
    • Malanoski, A.P.1    Lin, B.2    Wang, Z.3    Schnur, J.M.4    Stenger, D.A.5
  • 30
    • 1342289021 scopus 로고    scopus 로고
    • Isolation and characterization of a rhabdovirus from starry flounder (Platichthys stellatus) collected from the northern portion of Puget Sound, Washington, USA
    • Mork, C., P. Hershberger, R. Kocan, W. Batts, and J. Winton. 2004. Isolation and characterization of a rhabdovirus from starry flounder (Platichthys stellatus) collected from the northern portion of Puget Sound, Washington, USA. J. Gen. Virol. 85:495-505.
    • (2004) J. Gen. Virol. , vol.85 , pp. 495-505
    • Mork, C.1    Hershberger, P.2    Kocan, R.3    Batts, W.4    Winton, J.5
  • 33
    • 0024784519 scopus 로고
    • Identification of four conserved motifs among the RNA-dependent polymerase encoding elements
    • Poch, O., I. Sauvaget, M. Delarue, and N. Tordo. 1989. Identification of four conserved motifs among the RNA-dependent polymerase encoding elements. EMBO J. 8:3867-3874. (Pubitemid 20016069)
    • (1989) EMBO Journal , vol.8 , Issue.12 , pp. 3867-3874
    • Poch, O.1    Sauvaget, I.2    Delarue, M.3    Tordo, N.4
  • 37
    • 39149099838 scopus 로고    scopus 로고
    • Genomic sequence of mandarin fish rhabdovirus with an unusual small non-transcriptional ORF
    • Tao, J. J., G. Z. Zhou, J. F. Gui, and Q. Y. Zhang. 2008. Genomic sequence of mandarin fish rhabdovirus with an unusual small non-transcriptional ORF. Virus Res. 132:86-96.
    • (2008) Virus Res. , vol.132 , pp. 86-96
    • Tao, J.J.1    Zhou, G.Z.2    Gui, J.F.3    Zhang, Q.Y.4
  • 38
    • 0020682039 scopus 로고
    • Antigenic relationship among rhabdoviruses infecting terrestrial vertebrates
    • Tesh, R. B., A. P. Travassos Da Rosa, and J. S. Travassos Da Rosa. 1983. Antigenic relationship among rhabdoviruses infecting terrestrial vertebrates. J. Gen. Virol. 64(Pt. 1):169-176.
    • (1983) J. Gen. Virol. , vol.64 , Issue.PART 1 , pp. 169-176
    • Tesh, R.B.1    Travassos Da Rosa, A.P.2    Travassos Da Rosa, J.S.3
  • 39
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 40
    • 2442673171 scopus 로고    scopus 로고
    • Nucleic acid amplification strategies for DNA microarray-based pathogen detection
    • Vora, G. J., C. E. Meador, D. A. Stenger, and J. D. Andreadis. 2004. Nucleic acid amplification strategies for DNA microarray-based pathogen detection. Appl. Environ. Microbiol. 70:3047-3054.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 3047-3054
    • Vora, G.J.1    Meador, C.E.2    Stenger, D.A.3    Andreadis, J.D.4
  • 46
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based upon their reverse transcriptase sequences
    • Xiong, Y., and T. H. Eickbush. 1990. Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J. 9:3353-3362.
    • (1990) EMBO J. , vol.9 , pp. 3353-3362
    • Xiong, Y.1    Eickbush, T.H.2
  • 47
    • 35248872109 scopus 로고    scopus 로고
    • A simple sandwich ELISA (WELYSSA) for the detection of lyssavirus nucleocapsid in rabies suspected specimens using mouse monoclonal antibodies
    • Xu, G., P. Weber, Q. Hu, H. Xue, L. Audry, C. Li, J. Wu, and H. Bourhy. 2007. A simple sandwich ELISA (WELYSSA) for the detection of lyssavirus nucleocapsid in rabies suspected specimens using mouse monoclonal antibodies. Biologicals 35:297-302.
    • (2007) Biologicals , vol.35 , pp. 297-302
    • Xu, G.1    Weber, P.2    Hu, Q.3    Xue, H.4    Audry, L.5    Li, C.6    Wu, J.7    Bourhy, H.8
  • 48
    • 73449112244 scopus 로고    scopus 로고
    • DNA microarray-based identification of bacterial and fungal pathogens in bloodstream infections
    • Yoo, S. M., J. Y. Choi, J. K. Yun, J. K. Choi, S. Y. Shin, K. Lee, J. M. Kim, and S. Y. Lee. 2010. DNA microarray-based identification of bacterial and fungal pathogens in bloodstream infections. Mol. Cell. Probes 24:44-52.
    • (2010) Mol. Cell. Probes , vol.24 , pp. 44-52
    • Yoo, S.M.1    Choi, J.Y.2    Yun, J.K.3    Choi, J.K.4    Shin, S.Y.5    Lee, K.6    Kim, J.M.7    Lee, S.Y.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.