메뉴 건너뛰기




Volumn 6, Issue , 2011, Pages

Tools for efficient epistasis detection in genome-wide association study

Author keywords

[No Author keywords available]

Indexed keywords


EID: 78650796475     PISSN: None     EISSN: 17510473     Source Type: Journal    
DOI: 10.1186/1751-0473-6-1     Document Type: Review
Times cited : (9)

References (15)
  • 2
    • 84969213492 scopus 로고    scopus 로고
    • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    • 10.1038/nature05911, 2719288, 17554300, The Wellcome Trust Case Control Consortium
    • The Wellcome Trust Case Control Consortium Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 2007, 447:661-678. 10.1038/nature05911, 2719288, 17554300, The Wellcome Trust Case Control Consortium.
    • (2007) Nature , vol.447 , pp. 661-678
  • 3
    • 67349166946 scopus 로고    scopus 로고
    • Detecting genegene interactions that underlie human diseases
    • 10.1038/nrg2579, 2872761, 19434077
    • Cordell HJ. Detecting genegene interactions that underlie human diseases. Nature Reviews Genetics 2009, 10:392-404. 10.1038/nrg2579, 2872761, 19434077.
    • (2009) Nature Reviews Genetics , vol.10 , pp. 392-404
    • Cordell, H.J.1
  • 4
    • 33847059518 scopus 로고    scopus 로고
    • Detection of gene × gene interactions in genome-wide association studies of human population data
    • 10.1159/000099179, 17283436
    • Musani S, Shriner D, Liu N, Feng R, Coffey C, Yi N, Tiwari H, Allison D. Detection of gene × gene interactions in genome-wide association studies of human population data. Human Heredity 2007, 63(2):67-84. 10.1159/000099179, 17283436.
    • (2007) Human Heredity , vol.63 , Issue.2 , pp. 67-84
    • Musani, S.1    Shriner, D.2    Liu, N.3    Feng, R.4    Coffey, C.5    Yi, N.6    Tiwari, H.7    Allison, D.8
  • 6
    • 0028151261 scopus 로고
    • Empirical Threshold Values for Quantitative Trait Mapping
    • 1206241, 7851788
    • Churchill GA, Doerge RW. Empirical Threshold Values for Quantitative Trait Mapping. Genetics 1994, 138(3):963-971. 1206241, 7851788.
    • (1994) Genetics , vol.138 , Issue.3 , pp. 963-971
    • Churchill, G.A.1    Doerge, R.W.2
  • 7
    • 0035084663 scopus 로고    scopus 로고
    • A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation
    • 10.1101/gr.172901, 311041, 11230170
    • Nelson MR, Kardia SL, Ferrell RE, Sing CF. A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation. Genome Research 2001, 11:458-470. 10.1101/gr.172901, 311041, 11230170.
    • (2001) Genome Research , vol.11 , pp. 458-470
    • Nelson, M.R.1    Kardia, S.L.2    Ferrell, R.E.3    Sing, C.F.4
  • 8
    • 0034973569 scopus 로고    scopus 로고
    • Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer
    • 10.1086/321276, 1226028, 11404819
    • Ritchie MD, Hahn LW, Roodi N, Bailey LR, Dupont WD, Parl FF, Moore JH. Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer. American Journal of Human Genetics 2001, 69:138-147. 10.1086/321276, 1226028, 11404819.
    • (2001) American Journal of Human Genetics , vol.69 , pp. 138-147
    • Ritchie, M.D.1    Hahn, L.W.2    Roodi, N.3    Bailey, L.R.4    Dupont, W.D.5    Parl, F.F.6    Moore, J.H.7
  • 9
    • 0033879555 scopus 로고    scopus 로고
    • The use of a genetic algorithm for simultaneous mapping of multiple interacting quantitative trait loci
    • 1461191, 10924492
    • Carlborg O, Andersson L, Kinghorn B. The use of a genetic algorithm for simultaneous mapping of multiple interacting quantitative trait loci. Genetics 2000, 155(4):2003-2010. 1461191, 10924492.
    • (2000) Genetics , vol.155 , Issue.4 , pp. 2003-2010
    • Carlborg, O.1    Andersson, L.2    Kinghorn, B.3
  • 10
    • 33749388527 scopus 로고    scopus 로고
    • Two-Stage Two-Locus Models in Genome-Wide Association
    • 10.1371/journal.pgen.0020157, 1570380, 17002500
    • Evans DM, Marchini J, Morris AP, Cardon LR. Two-Stage Two-Locus Models in Genome-Wide Association. PLoS Genetics 2006, 2:e157. 10.1371/journal.pgen.0020157, 1570380, 17002500.
    • (2006) PLoS Genetics , vol.2
    • Evans, D.M.1    Marchini, J.2    Morris, A.P.3    Cardon, L.R.4
  • 11
    • 0034527775 scopus 로고    scopus 로고
    • Selecting SNPs in two-stage analysis of disease association data: a model-free approach
    • 10.1046/j.1469-1809.2000.6450413.x, 11281279
    • Hoh J, Wille A, Zee R, Cheng S, Reynolds R, Lindpaintner K, Ott J. Selecting SNPs in two-stage analysis of disease association data: a model-free approach. Annals of Human Genetics 2000, 64:413-417. 10.1046/j.1469-1809.2000.6450413.x, 11281279.
    • (2000) Annals of Human Genetics , vol.64 , pp. 413-417
    • Hoh, J.1    Wille, A.2    Zee, R.3    Cheng, S.4    Reynolds, R.5    Lindpaintner, K.6    Ott, J.7
  • 12
    • 60149109479 scopus 로고    scopus 로고
    • SNPHarvester: a Filtering-based approach for detecting epistatic interactions in genomewide association studies
    • 10.1093/bioinformatics/btn652, 19098029
    • Yang C, He Z, Wan X, Yang Q, Xue H, Yu W. SNPHarvester: a Filtering-based approach for detecting epistatic interactions in genomewide association studies. Bioinformatics 2009, 25(4):504-511. 10.1093/bioinformatics/btn652, 19098029.
    • (2009) Bioinformatics , vol.25 , Issue.4 , pp. 504-511
    • Yang, C.1    He, Z.2    Wan, X.3    Yang, Q.4    Xue, H.5    Yu, W.6
  • 13
    • 77950798630 scopus 로고    scopus 로고
    • COE: a General Approach for Efficient Genome-Wide Two-Locus Epistatic Test in Disease Association Study
    • 10.1089/cmb.2009.0155, 20377453
    • Zhang X, Pan F, Xie Y, Zou F, Wang W. COE: a General Approach for Efficient Genome-Wide Two-Locus Epistatic Test in Disease Association Study. Journal of Computational Biology 2010, 17(3):401-415. 10.1089/cmb.2009.0155, 20377453.
    • (2010) Journal of Computational Biology , vol.17 , Issue.3 , pp. 401-415
    • Zhang, X.1    Pan, F.2    Xie, Y.3    Zou, F.4    Wang, W.5
  • 14
    • 65449155592 scopus 로고    scopus 로고
    • FastANOVA: an Efficient Algorithm for Genome-Wide Association Study
    • Zhang X, Zou F, Wang W. FastANOVA: an Efficient Algorithm for Genome-Wide Association Study. Proc. KDD 2008, 821-829.
    • (2008) Proc. KDD , pp. 821-829
    • Zhang, X.1    Zou, F.2    Wang, W.3
  • 15
    • 77954182718 scopus 로고    scopus 로고
    • TEAM: Efficient Two-Locus Epistasis Tests in Human Genome-Wide Association Study
    • 10.1093/bioinformatics/btq186, 2881371, 20529910
    • Zhang X, Huang S, Zou F, Wang W. TEAM: Efficient Two-Locus Epistasis Tests in Human Genome-Wide Association Study. Bioinformatics 2010, 26(12):i217-227. 10.1093/bioinformatics/btq186, 2881371, 20529910.
    • (2010) Bioinformatics , vol.26 , Issue.12
    • Zhang, X.1    Huang, S.2    Zou, F.3    Wang, W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.