-
1
-
-
0035022941
-
Intrinsically disordered protein
-
Dunker AK, Lawson JD, Brown CJ, Williams RM, Romero P, Oh JS, Oldfield CJ, Campen AM, Ratliff CM, Hipps KW, Ausio J, Nissen MS, Reeves R, Zhang C, Kissinger CR, Bailey RW, Griswold MD, Chiu W, Garner EC, Obradovic Z (2001) Intrinsically disordered protein. J Mol Graphics Model 19:26-59.
-
(2001)
J Mol Graphics Model
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
Ausio, J.11
Nissen, M.S.12
Reeves, R.13
Zhang, C.14
Kissinger, C.R.15
Bailey, R.W.16
Griswold, M.D.17
Chiu, W.18
Garner, E.C.19
Obradovic, Z.20
more..
-
2
-
-
0036803243
-
Intrinsically unstructured proteins
-
Tompa P (2002) Intrinsically unstructured proteins. Trends Biochem Sci 27:527-533.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 527-533
-
-
Tompa, P.1
-
3
-
-
0036128797
-
Natively unfolded proteins: A point where biology waits for physics
-
Uversky VN (2002) Natively unfolded proteins: a point where biology waits for physics. Protein Sci 11: 739-756.
-
(2002)
Protein Sci
, vol.11
, pp. 739-756
-
-
Uversky, V.N.1
-
4
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson HJ, Wright PE (2005) Intrinsically unstructured proteins and their functions. Nat Rev Mol Cell Biol 6: 197-208.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
5
-
-
13844255387
-
Natively unfolded proteins
-
Fink AL (2005) Natively unfolded proteins. Curr Opin Struc Biol 15:35-41.
-
(2005)
Curr Opin Struc Biol
, vol.15
, pp. 35-41
-
-
Fink, A.L.1
-
6
-
-
33751289801
-
Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy
-
Morin B, Bourhis JM, Belle V, Woudstra M, Carriere F, Guigliarelli B, Fournel A, Longhi S (2006) Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy. J Phys Chem B 110: 20596-20608.
-
(2006)
J Phys Chem B
, vol.110
, pp. 20596-20608
-
-
Morin, B.1
Bourhis, J.M.2
Belle, V.3
Woudstra, M.4
Carriere, F.5
Guigliarelli, B.6
Fournel, A.7
Longhi, S.8
-
7
-
-
58149279796
-
Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy
-
Belle V, Rouger S, Costanzo S, Liquiere E, Strancar J, Guigliarelli B, Fournel A, Longhi S (2008) Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy. Proteins 73:973-988.
-
(2008)
Proteins
, vol.73
, pp. 973-988
-
-
Belle, V.1
Rouger, S.2
Costanzo, S.3
Liquiere, E.4
Strancar, J.5
Guigliarelli, B.6
Fournel, A.7
Longhi, S.8
-
8
-
-
0036468397
-
Coupling of folding and binding for unstructured proteins
-
Dyson HJ, Wright PE (2002) Coupling of folding and binding for unstructured proteins. Curr Opin Struc Biol 12:54-60.
-
(2002)
Curr Opin Struc Biol
, vol.12
, pp. 54-60
-
-
Dyson, H.J.1
Wright, P.E.2
-
9
-
-
33847795359
-
Intrinsic disorder and functional proteomics
-
Radivojac P, Iakoucheva LM, Oldfield CJ, Obradovic Z, Uversky VN, Dunker AK (2007) Intrinsic disorder and functional proteomics. Biophys J 92:1439-1456.
-
(2007)
Biophys J
, vol.92
, pp. 1439-1456
-
-
Radivojac, P.1
Iakoucheva, L.M.2
Oldfield, C.J.3
Obradovic, Z.4
Uversky, V.N.5
Dunker, A.K.6
-
10
-
-
2142757231
-
Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
-
Fuxreiter M, Simon I, Friedrich P, Tompa P (2004) Preformed structural elements feature in partner recognition by intrinsically unstructured proteins. J Mol Biol 338:1015-1026.
-
(2004)
J Mol Biol
, vol.338
, pp. 1015-1026
-
-
Fuxreiter, M.1
Simon, I.2
Friedrich, P.3
Tompa, P.4
-
11
-
-
1842473094
-
P27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding
-
Lacy ER, Filippov I, Lewis WS, Otieno S, Xiao L, Weiss S, Hengst L, Kriwacki RW (2004) p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding. Nat Struct Mol Biol 11:358-364.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 358-364
-
-
Lacy, E.R.1
Filippov, I.2
Lewis, W.S.3
Otieno, S.4
Xiao, L.5
Weiss, S.6
Hengst, L.7
Kriwacki, R.W.8
-
12
-
-
0033950453
-
The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix
-
Li M, Phylip LH, Lees WE, Winther JR, Dunn BM, Wlodaawer A, Kay J, Gustchina A (2000) The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix. Nat Struct Biol 7:113-117.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 113-117
-
-
Li, M.1
Phylip, L.H.2
Lees, W.E.3
Winther, J.R.4
Dunn, B.M.5
Wlodaawer, A.6
Kay, J.7
Gustchina, A.8
-
13
-
-
1842531458
-
IA(3), an aspartic proteinase inhibitor from Saccharomyces cerevisiae, is intrinsically unstructured in solution
-
Green TB, Ganesh O, Perry K, Smith L, Phylip LH, Logan TM, Hagen SJ, Dunn BM, Edison AS (2004) IA(3), an aspartic proteinase inhibitor from Saccharomyces cerevisiae, is intrinsically unstructured in solution. Biochemistry 43:4071-4081.
-
(2004)
Biochemistry
, vol.43
, pp. 4071-4081
-
-
Green, T.B.1
Ganesh, O.2
Perry, K.3
Smith, L.4
Phylip, L.H.5
Logan, T.M.6
Hagen, S.J.7
Dunn, B.M.8
Edison, A.S.9
-
14
-
-
33750978439
-
Characterizing the residue level folding of the intrinsically unstructured IA(3)
-
Ganesh OK, Green TB, Edisono AS, Hagen SJ (2006) Characterizing the residue level folding of the intrinsically unstructured IA(3). Biochemistry 45: 13585-13596.
-
(2006)
Biochemistry
, vol.45
, pp. 13585-13596
-
-
Ganesh, O.K.1
Green, T.B.2
Edisono, A.S.3
Hagen, S.J.4
-
15
-
-
2942527068
-
Mapping backbone dynamics in solution with site-directed spin labeling: GCN4-58 bZip free and bound to DNA
-
Columbus L, Hubbell WL (2004) Mapping backbone dynamics in solution with site-directed spin labeling: GCN4-58 bZip free and bound to DNA. Biochemistry 43:7273-7287.
-
(2004)
Biochemistry
, vol.43
, pp. 7273-7287
-
-
Columbus, L.1
Hubbell, W.L.2
-
16
-
-
61949215199
-
Solute effects on spin labels at an aqueous-exposed site in the flap region of HIV-1 protease
-
Galiano L, Blackburn ME, Veloro AM, Bonora M, Fanucci GE (2009) Solute effects on spin labels at an aqueous-exposed site in the flap region of HIV-1 protease. J Phys Chem B 113:1673-1680.
-
(2009)
J Phys Chem B
, vol.113
, pp. 1673-1680
-
-
Galiano, L.1
Blackburn, M.E.2
Veloro, A.M.3
Bonora, M.4
Fanucci, G.E.5
-
17
-
-
33749041288
-
Recent advances and applications of site-directed spin labeling
-
Fanucci GE, Cafiso DS (2006) Recent advances and applications of site-directed spin labeling. Curr Opin Struct Biol 16:644-653.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 644-653
-
-
Fanucci, G.E.1
Cafiso, D.S.2
-
18
-
-
0030937861
-
Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c .1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102
-
Qu KB, Vaughn JL, Sienkiewicz A, Scholes CP, Fetrow JS (1997) Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c .1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102. Biochemistry 36:2884-2897.
-
(1997)
Biochemistry
, vol.36
, pp. 2884-2897
-
-
Qu, K.B.1
Vaughn, J.L.2
Sienkiewicz, A.3
Scholes, C.P.4
Fetrow, J.S.5
-
20
-
-
0028108981
-
Investigation of structure and dynamics in membrane-proteins using sitedirected spin-labeling
-
Hubbell WL, Altenbach C (1994) Investigation of structure and dynamics in membrane-proteins using sitedirected spin-labeling. Curr Opin Struc Biol 4:566-573.
-
(1994)
Curr Opin Struc Biol
, vol.4
, pp. 566-573
-
-
Hubbell, W.L.1
Altenbach, C.2
-
21
-
-
33645098003
-
A model system for investigating lineshape/structure correlations in RNA sitedirected spin labeling
-
Qin PZ, Iseri J, Oki A (2006) A model system for investigating lineshape/structure correlations in RNA sitedirected spin labeling. Biochem Biophys Res Comm 343:117-124.
-
(2006)
Biochem Biophys Res Comm
, vol.343
, pp. 117-124
-
-
Qin, P.Z.1
Iseri, J.2
Oki, A.3
-
22
-
-
0037452539
-
Substrate-induced conformational changes of the perplasmic N-terminus of an outermembrane transporter by site-directed spin labeling
-
Fanucci GE, Coggshall KA, Cadieux N, Kim M, Kadner RJ, Cafiso DS (2003) Substrate-induced conformational changes of the perplasmic N-terminus of an outermembrane transporter by site-directed spin labeling. Biochemistry 42:1391-1400.
-
(2003)
Biochemistry
, vol.42
, pp. 1391-1400
-
-
Fanucci, G.E.1
Coggshall, K.A.2
Cadieux, N.3
Kim, M.4
Kadner, R.J.5
Cafiso, D.S.6
-
23
-
-
15244339850
-
Site-directed spin labeling reveals a conformational switch in the phosphorylation domain of smooth muscle myosin
-
Nelson WD, Blakely SE, Nesmelov YE, Thomas DD (2005) Site-directed spin labeling reveals a conformational switch in the phosphorylation domain of smooth muscle myosin. Proc Natl Acad Sci USA 102: 4000-4005.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 4000-4005
-
-
Nelson, W.D.1
Blakely, S.E.2
Nesmelov, Y.E.3
Thomas, D.D.4
-
24
-
-
27944506894
-
Solution structure of the cytoplasmic domain of erythrocyte membrane band 3 determined by site-directed spin labeling
-
Zhou Z, DeSensi SC, Stein RA, Brandon S, Dixit M, McArdle EJ, Warren EM, Kroh HK, Song L, Cobb CE, Hustedt EJ, Beth AH (2005) Solution structure of the cytoplasmic domain of erythrocyte membrane band 3 determined by site-directed spin labeling. Biochemistry 44:15115-15128.
-
(2005)
Biochemistry
, vol.44
, pp. 15115-15128
-
-
Zhou, Z.1
DeSensi, S.C.2
Stein, R.A.3
Brandon, S.4
Dixit, M.5
McArdle, E.J.6
Warren, E.M.7
Kroh, H.K.8
Song, L.9
Cobb, C.E.10
Hustedt, E.J.11
Beth, A.H.12
-
25
-
-
34547546213
-
Substrate-dependent transmembrane signaling in TonB-dependent transporters is not conserved
-
Kim M, Fanucci GE, Cafiso DS (2007) Substrate-dependent transmembrane signaling in TonB-dependent transporters is not conserved. Proc Natl Acad Sci USA 104:11975-11980.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 11975-11980
-
-
Kim, M.1
Fanucci, G.E.2
Cafiso, D.S.3
-
26
-
-
77949599421
-
Conformational analysis of the partially disordered measles virus N(TAIL)-XD complex by SDSL EPR spectroscopy
-
Kavalenka A, Urbancic I, Belle V, Rouger S, Costanzo S, Kure S, Fournel A, Longhi S, Guigliarelli B, Strancar J (2010) Conformational analysis of the partially disordered measles virus N(TAIL)-XD complex by SDSL EPR spectroscopy. Biophys J 98:1055-1064.
-
(2010)
Biophys J
, vol.98
, pp. 1055-1064
-
-
Kavalenka, A.1
Urbancic, I.2
Belle, V.3
Rouger, S.4
Costanzo, S.5
Kure, S.6
Fournel, A.7
Longhi, S.8
Guigliarelli, B.9
Strancar, J.10
-
27
-
-
78650772092
-
Biological magnetic resonance
-
New York: Plenum Press
-
Berliner LJ (1978) Biological Magnetic Resonance, Spin Labeling: Theory and Applications. 1, New York: Plenum Press, pp 5-52.
-
(1978)
Spin Labeling: Theory and Applications
, vol.1
, pp. 5-52
-
-
Berliner, L.J.1
-
28
-
-
33751289801
-
Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy
-
Morin B, Bourhis J-M, Belle V, Woudstra M, Carriere F, Guigliarelli B, Fournel A, Longhi S (2006) Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy. J Phys Chem B 110:20.596-20608.
-
(2006)
J Phys Chem B
, vol.110
, pp. 20596-20608
-
-
Morin, B.1
Bourhis, J.-M.2
Belle, V.3
Woudstra, M.4
Carriere, F.5
Guigliarelli, B.6
Fournel, A.7
Longhi, S.8
-
29
-
-
0030568731
-
Relationship of rotational correlation time from EPR spectroscopy and protein-membrane interaction
-
Oppenheim SF, Buettner GR, Rodgers VGJ (1996) Relationship of rotational correlation time from EPR spectroscopy and protein-membrane interaction. J Memb Sci 118:133-139.
-
(1996)
J Memb Sci
, vol.118
, pp. 133-139
-
-
Oppenheim, S.F.1
Buettner, G.R.2
Rodgers, V.G.J.3
-
30
-
-
50249134423
-
Kinetics of folding and binding of an intrinsically disordered protein: The inhibitor of yeast aspartic proteinase YPrA
-
Narayanan R, Ganesh OK, Edison AS, Hagen SJ (2008) Kinetics of folding and binding of an intrinsically disordered protein: the inhibitor of yeast aspartic proteinase YPrA. J Am Chem Soc 130:11477-11485.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 11477-11485
-
-
Narayanan, R.1
Ganesh, O.K.2
Edison, A.S.3
Hagen, S.J.4
-
31
-
-
0039171268
-
Crystal structures of spin labeled T4 lysozyme mutants: Implications for the interpretation of EPR spectra in terms of structure
-
Langen R, Oh KJ, Cascio D, Hubbell WL (2000) Crystal structures of spin labeled T4 lysozyme mutants: implications for the interpretation of EPR spectra in terms of structure. Biochemistry 39:8396-8405.
-
(2000)
Biochemistry
, vol.39
, pp. 8396-8405
-
-
Langen, R.1
Oh, K.J.2
Cascio, D.3
Hubbell, W.L.4
-
32
-
-
2442553272
-
Electron paramagnetic resonance reveals a large-scale conformational change in the cytoplasmic domain of phospholamban upon binding to the sarcoplasmic reticulum Ca-ATPase
-
Kirby TL, Karim CB, Thomas DD (2004) Electron paramagnetic resonance reveals a large-scale conformational change in the cytoplasmic domain of phospholamban upon binding to the sarcoplasmic reticulum Ca-ATPase. Biochemistry 43:5842-5852.
-
(2004)
Biochemistry
, vol.43
, pp. 5842-5852
-
-
Kirby, T.L.1
Karim, C.B.2
Thomas, D.D.3
-
33
-
-
0025776471
-
ESR spectra reflect local and global mobility in a short spin-labeled peptide throughout the alpha-helix-coil transition
-
Todd AP, Millhauser GL (1991) ESR spectra reflect local and global mobility in a short spin-labeled peptide throughout the alpha-helix-coil transition. Biochemistry 30:5515-5523.
-
(1991)
Biochemistry
, vol.30
, pp. 5515-5523
-
-
Todd, A.P.1
Millhauser, G.L.2
-
34
-
-
0026055737
-
Position-dependent local motions in spin-labeled analogues of a short alpha-helical peptide determined by electron spin resonance
-
Miick SM, Todd AP, Millhauser GL (1991) Position-dependent local motions in spin-labeled analogues of a short alpha-helical peptide determined by electron spin resonance. Biochemistry 30:9498-9503.
-
(1991)
Biochemistry
, vol.30
, pp. 9498-9503
-
-
Miick, S.M.1
Todd, A.P.2
Millhauser, G.L.3
-
35
-
-
0000326938
-
Nonlinear- least-squares analysis of slow-motion EPR spectra in one and two dimensions using a modified Levenberg- Marquardt algorithm
-
Budil DE, Lee S, Saxena S, Freed JH (1996) Nonlinear- least-squares analysis of slow-motion EPR spectra in one and two dimensions using a modified Levenberg- Marquardt algorithm. J Magn Reson 120:155-189.
-
(1996)
J Magn Reson
, vol.120
, pp. 155-189
-
-
Budil, D.E.1
Lee, S.2
Saxena, S.3
Freed, J.H.4
-
36
-
-
0037465668
-
A novel strategy for the purification of recombinantly expressed unstructured protein domains
-
Kalthoff C (2003) A novel strategy for the purification of recombinantly expressed unstructured protein domains. J Chromatogr B 786:247-254.
-
(2003)
J Chromatogr B
, vol.786
, pp. 247-254
-
-
Kalthoff, C.1
|