-
1
-
-
33750297873
-
HIV evolutionary dynamics within and among hosts
-
Lemey P., et al. HIV evolutionary dynamics within and among hosts. AIDS Rev. 2006, 8:125-140.
-
(2006)
AIDS Rev.
, vol.8
, pp. 125-140
-
-
Lemey, P.1
-
2
-
-
26244458950
-
Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients
-
Alfonso V., et al. Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients. J. Gen. Virol. 2005, 86:2781-2786.
-
(2005)
J. Gen. Virol.
, vol.86
, pp. 2781-2786
-
-
Alfonso, V.1
-
3
-
-
34249048365
-
Helicobacter pylori evolution and phenotypic diversification in a changing host
-
Suerbaum S., Josenhans C. Helicobacter pylori evolution and phenotypic diversification in a changing host. Nat. Rev. Microbiol. 2007, 5:441-452.
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 441-452
-
-
Suerbaum, S.1
Josenhans, C.2
-
4
-
-
62849096845
-
Harnessing genomics for evolutionary insights
-
Rokas A., Abbot P. Harnessing genomics for evolutionary insights. Trends Ecol. Evol. 2009, 24:192-200.
-
(2009)
Trends Ecol. Evol.
, vol.24
, pp. 192-200
-
-
Rokas, A.1
Abbot, P.2
-
5
-
-
77952299935
-
Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1
-
Poon A.F.Y., et al. Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1. Mol. Biol. Evol. 2010, 27:819-832.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 819-832
-
-
Poon, A.F.Y.1
-
6
-
-
57549094802
-
Evolutionary epidemiology 20 years on: challenges and prospects
-
Restif O. Evolutionary epidemiology 20 years on: challenges and prospects. Infect. Genet. Evol. 2009, 9:108-123.
-
(2009)
Infect. Genet. Evol.
, vol.9
, pp. 108-123
-
-
Restif, O.1
-
7
-
-
51449113044
-
Capturing escape in infectious disease dynamics
-
Cobey S., Koelle K. Capturing escape in infectious disease dynamics. Trends Ecol. Evol. 2008, 23:572-577.
-
(2008)
Trends Ecol. Evol.
, vol.23
, pp. 572-577
-
-
Cobey, S.1
Koelle, K.2
-
8
-
-
0346373759
-
Unifying the epidemiological and evolutionary dynamics of pathogens
-
Grenfell B.T., et al. Unifying the epidemiological and evolutionary dynamics of pathogens. Science 2004, 303:327-332.
-
(2004)
Science
, vol.303
, pp. 327-332
-
-
Grenfell, B.T.1
-
9
-
-
67651100815
-
Evolutionary analysis of the dynamics of viral infectious disease
-
Pybus O.G., Rambaut A. Evolutionary analysis of the dynamics of viral infectious disease. Nat. Rev. Genet. 2009, 10:540-550.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 540-550
-
-
Pybus, O.G.1
Rambaut, A.2
-
10
-
-
49049118638
-
Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases
-
Mideo N., et al. Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases. Trends Ecol. Evol. 2008, 23:511-517.
-
(2008)
Trends Ecol. Evol.
, vol.23
, pp. 511-517
-
-
Mideo, N.1
-
11
-
-
73449108787
-
The evolutionary dynamics of a rapidly mutating virus within and between hosts: the case of hepatitis C virus
-
Luciani F., Alizon S. The evolutionary dynamics of a rapidly mutating virus within and between hosts: the case of hepatitis C virus. PLoS Comput. Biol. 2009, 5:e1000565.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Luciani, F.1
Alizon, S.2
-
12
-
-
73349098458
-
Antigenic diversity, transmission mechanisms, and the evolution of pathogens
-
Lange A., Ferguson N.M. Antigenic diversity, transmission mechanisms, and the evolution of pathogens. PLoS Comput. Biol. 2009, 5:e1000536.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Lange, A.1
Ferguson, N.M.2
-
13
-
-
1842741699
-
HIV evolution: CTL escape mutation and reversion after transmission
-
Leslie A.J., et al. HIV evolution: CTL escape mutation and reversion after transmission. Nat. Med. 2004, 10:282-289.
-
(2004)
Nat. Med.
, vol.10
, pp. 282-289
-
-
Leslie, A.J.1
-
14
-
-
70350599175
-
Quantifying the impact of immune escape on transmission dynamics of influenza
-
Park A.W., et al. Quantifying the impact of immune escape on transmission dynamics of influenza. Science 2009, 326:726-728.
-
(2009)
Science
, vol.326
, pp. 726-728
-
-
Park, A.W.1
-
15
-
-
53149108946
-
Multiple infections, immune dynamics and virulence evolution
-
Alizon S., van Baalen M. Multiple infections, immune dynamics and virulence evolution. Am. Nat. 2008, 172:E150-E158.
-
(2008)
Am. Nat.
, vol.172
-
-
Alizon, S.1
van Baalen, M.2
-
16
-
-
35348941195
-
Evaluating the importance of within- and between-host selection pressures on the evolution of chronic pathogens
-
Coombs D., et al. Evaluating the importance of within- and between-host selection pressures on the evolution of chronic pathogens. Theor. Popul. Biol. 2007, 72:576-591.
-
(2007)
Theor. Popul. Biol.
, vol.72
, pp. 576-591
-
-
Coombs, D.1
-
17
-
-
21644477889
-
Changes in human immunodeficiency virus type 1 fitness and genetic diversity during disease progression
-
Troyer R.M., et al. Changes in human immunodeficiency virus type 1 fitness and genetic diversity during disease progression. J. Virol. 2005, 79:9006-9018.
-
(2005)
J. Virol.
, vol.79
, pp. 9006-9018
-
-
Troyer, R.M.1
-
18
-
-
34249727264
-
Survey of the temporal changes in HIV-1 replicative fitness in the Amsterdam Cohort
-
Gali Y., et al. Survey of the temporal changes in HIV-1 replicative fitness in the Amsterdam Cohort. Virology 2007, 364:140-146.
-
(2007)
Virology
, vol.364
, pp. 140-146
-
-
Gali, Y.1
-
19
-
-
12144289425
-
Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission
-
Derdeyn C.A., et al. Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission. Science 2004, 303:2019-2022.
-
(2004)
Science
, vol.303
, pp. 2019-2022
-
-
Derdeyn, C.A.1
-
20
-
-
78149306494
-
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load
-
Alizon S., et al. Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load. PLoS Pathog. 2010, 6:e1001123.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Alizon, S.1
-
21
-
-
77954059111
-
HIV-1 transmitting couples have similar viral load set-points in Rakai, Uganda
-
Hollingsworth T.D., et al. HIV-1 transmitting couples have similar viral load set-points in Rakai, Uganda. PLoS Pathog. 2010, 6:e1000876.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Hollingsworth, T.D.1
-
22
-
-
0028203644
-
Short-sighted evolution and the virulence of pathogenic microorganisms
-
Levin B.R., Bull J.J. Short-sighted evolution and the virulence of pathogenic microorganisms. Trends Microbiol. 1994, 2:76-81.
-
(1994)
Trends Microbiol.
, vol.2
, pp. 76-81
-
-
Levin, B.R.1
Bull, J.J.2
-
23
-
-
34548072504
-
A general theory for the evolutionary dynamics of virulence
-
Day T., Proulx S.R. A general theory for the evolutionary dynamics of virulence. Am. Nat. 2004, 163:E40-E63.
-
(2004)
Am. Nat.
, vol.163
-
-
Day, T.1
Proulx, S.R.2
-
24
-
-
43749085321
-
Parasite immune evasion: a momentous molecular war
-
Schmid-Hempel P. Parasite immune evasion: a momentous molecular war. Trends Ecol. Evol. 2008, 23:318-326.
-
(2008)
Trends Ecol. Evol.
, vol.23
, pp. 318-326
-
-
Schmid-Hempel, P.1
-
25
-
-
33751021082
-
Stochastic or deterministic: what is the effective population size of HIV-1?
-
Kouyos R.D., et al. Stochastic or deterministic: what is the effective population size of HIV-1?. Trends Microbiol. 2006, 14:507-511.
-
(2006)
Trends Microbiol.
, vol.14
, pp. 507-511
-
-
Kouyos, R.D.1
-
26
-
-
0031048597
-
Positive selection of HIV-1 cytotoxic T lymphocyte escape variants during primary infectionw
-
Price D.A., et al. Positive selection of HIV-1 cytotoxic T lymphocyte escape variants during primary infectionw. Proc. Natl. Acad. Sci. U. S. A. 1997, 94:1890-1895.
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 1890-1895
-
-
Price, D.A.1
-
27
-
-
0035810898
-
Genetic drift and within-host metapopulation dynamics of HIV-1 infection
-
Frost S.D.W., et al. Genetic drift and within-host metapopulation dynamics of HIV-1 infection. Proc. Natl. Acad. Sci. U. S. A. 2001, 98:6975-6980.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 6975-6980
-
-
Frost, S.D.W.1
-
29
-
-
0347989161
-
The causes and consequences of HIV evolution
-
Rambaut A., et al. The causes and consequences of HIV evolution. Nat. Rev. Genet. 2004, 5:52-61.
-
(2004)
Nat. Rev. Genet.
, vol.5
, pp. 52-61
-
-
Rambaut, A.1
-
30
-
-
0034646996
-
The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies
-
Farci P., et al. The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies. Science 2000, 288:339-344.
-
(2000)
Science
, vol.288
, pp. 339-344
-
-
Farci, P.1
-
31
-
-
70349966196
-
Genetic variation in IL28B and spontaneous clearance of hepatitis C virus
-
Thomas D.L., et al. Genetic variation in IL28B and spontaneous clearance of hepatitis C virus. Nature 2009, 461:798-801.
-
(2009)
Nature
, vol.461
, pp. 798-801
-
-
Thomas, D.L.1
-
32
-
-
33744814106
-
Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients
-
Smith E.E., et al. Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:8487-8492.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 8487-8492
-
-
Smith, E.E.1
-
33
-
-
35348845737
-
Within-host evolution for the invasiveness of commensal bacteria: an experimental study of bacteremias resulting from Haemophilus influenzae nasal carriage
-
Margolis E., Levin B.R. Within-host evolution for the invasiveness of commensal bacteria: an experimental study of bacteremias resulting from Haemophilus influenzae nasal carriage. J. Infect. Dis. 2007, 196:1068-1075.
-
(2007)
J. Infect. Dis.
, vol.196
, pp. 1068-1075
-
-
Margolis, E.1
Levin, B.R.2
-
34
-
-
3042800705
-
Diversity in pathogenicity can cause outbreaks of meningococcal disease
-
Stollenwerk N., et al. Diversity in pathogenicity can cause outbreaks of meningococcal disease. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:10229-10234.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 10229-10234
-
-
Stollenwerk, N.1
-
35
-
-
0031057479
-
The population dynamics of antimicrobial chemotherapy
-
Lipsitch M., et al. The population dynamics of antimicrobial chemotherapy. Antimicrob. Agents Chemother. 1997, 41:363-373.
-
(1997)
Antimicrob. Agents Chemother.
, vol.41
, pp. 363-373
-
-
Lipsitch, M.1
-
36
-
-
0032968677
-
A stochastic model for primary HIV infection: optimal timing of therapy
-
Ribeiro R.M., Bonhoeffer S. A stochastic model for primary HIV infection: optimal timing of therapy. AIDS 1999, 13:351-357.
-
(1999)
AIDS
, vol.13
, pp. 351-357
-
-
Ribeiro, R.M.1
Bonhoeffer, S.2
-
37
-
-
58649103313
-
Exploring the role of the immune response in preventing antibiotic resistance
-
Handel A., et al. Exploring the role of the immune response in preventing antibiotic resistance. J. Theor. Biol. 2009, 256:655-662.
-
(2009)
J. Theor. Biol.
, vol.256
, pp. 655-662
-
-
Handel, A.1
-
38
-
-
4344709121
-
Roles of target cells and virus-specific cellular immunity in primary simian immunodeficiency virus infection
-
Regoes R.R., et al. Roles of target cells and virus-specific cellular immunity in primary simian immunodeficiency virus infection. J. Virol. 2004, 78:4866-4875.
-
(2004)
J. Virol.
, vol.78
, pp. 4866-4875
-
-
Regoes, R.R.1
-
40
-
-
0037197858
-
Mutator clones of Neisseria meningitidis in epidemic serogroup A disease
-
Richardson A.R., et al. Mutator clones of Neisseria meningitidis in epidemic serogroup A disease. Proc. Natl. Acad. Sci. U. S. A. 2002, 99:6103-6107.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 6103-6107
-
-
Richardson, A.R.1
-
41
-
-
77649227884
-
Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis
-
Price E.P., et al. Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis. PLoS Pathog. 2010, 6:e1000725.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Price, E.P.1
-
42
-
-
78449265406
-
Within-host viral evolution in a heterogeneous environment Insights into the HIV co-receptor switch
-
Alizon S., Boldin B. Within-host viral evolution in a heterogeneous environment Insights into the HIV co-receptor switch. J. Evol. Biol. 2010, 23:2625-2635.
-
(2010)
J. Evol. Biol.
, vol.23
, pp. 2625-2635
-
-
Alizon, S.1
Boldin, B.2
-
43
-
-
30344464412
-
Naïve and memory cell turnover as drivers of CCR5-to-CXCR4 tropism switch in human immunodeficiency virus type 1: implications for therapy
-
Ribeiro R.M., et al. Naïve and memory cell turnover as drivers of CCR5-to-CXCR4 tropism switch in human immunodeficiency virus type 1: implications for therapy. J. Virol. 2006, 80:802-809.
-
(2006)
J. Virol.
, vol.80
, pp. 802-809
-
-
Ribeiro, R.M.1
-
44
-
-
84871858747
-
Within-host pathogen dynamics: some ecological and evolutionary consequences of transients, dispersal mode, and within-host spatial heterogeneity. In Disease Evolution: Models, Concepts, and Data Analyses
-
Feng Z. et al., eds, DIMACS Series in Discrete Mathematics and Theoretical Computer Science.
-
Holt, R.D. and Barfield, M. (2006) Within-host pathogen dynamics: some ecological and evolutionary consequences of transients, dispersal mode, and within-host spatial heterogeneity. In Disease Evolution: Models, Concepts, and Data Analyses (Feng Z. et al., eds), (vol. 71, DIMACS Series in Discrete Mathematics and Theoretical Computer Science), pp. 45-66, American Mathematical Society, Providence, RI.
-
(2006)
American Mathematical So
, vol.71
, pp. 45-66
-
-
Holt, R.D.1
Barfield, M.2
-
45
-
-
70349416592
-
Live where you thrive: joint evolution of habitat choice and local adaptation facilitates specialization and promotes diversity
-
Ravigné V., et al. Live where you thrive: joint evolution of habitat choice and local adaptation facilitates specialization and promotes diversity. Am. Nat. 2009, 174:E141-E169.
-
(2009)
Am. Nat.
, vol.174
-
-
Ravigné, V.1
-
46
-
-
38649125925
-
Self-structuring in spatial evolutionary ecology
-
Lion S., van Baalen M. Self-structuring in spatial evolutionary ecology. Ecol. Lett. 2008, 11:277-295.
-
(2008)
Ecol. Lett.
, vol.11
, pp. 277-295
-
-
Lion, S.1
van Baalen, M.2
-
47
-
-
42449128896
-
Kin selection and the evolution of virulence
-
Buckling A., Brockhurst M.A. Kin selection and the evolution of virulence. Heredity 2008, 100:484-488.
-
(2008)
Heredity
, vol.100
, pp. 484-488
-
-
Buckling, A.1
Brockhurst, M.A.2
-
48
-
-
77952709675
-
Hepatitis C virus transmission bottlenecks analyzed by deep sequencing
-
Wang G.P., et al. Hepatitis C virus transmission bottlenecks analyzed by deep sequencing. J. Virol. 2010, 84:6218-6228.
-
(2010)
J. Virol.
, vol.84
, pp. 6218-6228
-
-
Wang, G.P.1
-
49
-
-
44449094569
-
Sex ratio adjustment and kin discrimination in malaria parasites
-
Reece S.E., et al. Sex ratio adjustment and kin discrimination in malaria parasites. Nature 2008, 453:609-614.
-
(2008)
Nature
, vol.453
, pp. 609-614
-
-
Reece, S.E.1
-
50
-
-
77958120655
-
Host imprints on bacterial genomes - rapid, divergent evolution in individual patients
-
Zdziarski J., et al. Host imprints on bacterial genomes - rapid, divergent evolution in individual patients. PLoS Pathog. 2010, 6:e1001078.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Zdziarski, J.1
-
51
-
-
62749156097
-
Evolutionary epidemiology and the dynamics of adaptation
-
Gandon S., et al. Evolutionary epidemiology and the dynamics of adaptation. Evolution 2009, 63:826-838.
-
(2009)
Evolution
, vol.63
, pp. 826-838
-
-
Gandon, S.1
-
52
-
-
65249104614
-
The Price equation framework to study disease within-host evolution
-
Alizon S. The Price equation framework to study disease within-host evolution. J. Evol. Biol. 2009, 22:1123-1132.
-
(2009)
J. Evol. Biol.
, vol.22
, pp. 1123-1132
-
-
Alizon, S.1
-
53
-
-
34047219156
-
Adaptation to human populations is revealed by within-host polymorphisms in HIV-1 and hepatitis c virus
-
Poon A.F.Y., et al. Adaptation to human populations is revealed by within-host polymorphisms in HIV-1 and hepatitis c virus. PLoS Pathog. 2007, 3:e45.
-
(2007)
PLoS Pathog.
, vol.3
-
-
Poon, A.F.Y.1
-
54
-
-
0037468827
-
Ecological and immunological determinants of influenza evolution
-
Ferguson N.M., et al. Ecological and immunological determinants of influenza evolution. Nature 2003, 422:428-433.
-
(2003)
Nature
, vol.422
, pp. 428-433
-
-
Ferguson, N.M.1
-
55
-
-
0032710838
-
Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection
-
Shankarappa R., et al. Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection. J. Virol. 1999, 73:10489-10502.
-
(1999)
J. Virol.
, vol.73
, pp. 10489-10502
-
-
Shankarappa, R.1
-
56
-
-
0037057124
-
Genetic diversity and models of viral evolution for the hepatitis C virus
-
Stumpf M.P.H., Pybus O.G. Genetic diversity and models of viral evolution for the hepatitis C virus. FEMS Microbiol. Lett. 2002, 214:143-152.
-
(2002)
FEMS Microbiol. Lett.
, vol.214
, pp. 143-152
-
-
Stumpf, M.P.H.1
Pybus, O.G.2
-
57
-
-
77956543002
-
Rhinovirus genome evolution during experimental human infection
-
Cordey S., et al. Rhinovirus genome evolution during experimental human infection. PLoS One 2010, 5:e10588.
-
(2010)
PLoS One
, vol.5
-
-
Cordey, S.1
-
58
-
-
10744233688
-
Mycobacterium tuberculosis growth at the cavity surface: a microenvironment with failed immunity
-
Kaplan G., et al. Mycobacterium tuberculosis growth at the cavity surface: a microenvironment with failed immunity. Infect. Immun. 2003, 71:7099-7108.
-
(2003)
Infect. Immun.
, vol.71
, pp. 7099-7108
-
-
Kaplan, G.1
-
59
-
-
22144458720
-
Drug resistance evolution of a Mycobacterium tuberculosis strain from a noncompliant patient
-
Meacci F., et al. Drug resistance evolution of a Mycobacterium tuberculosis strain from a noncompliant patient. J. Clin. Microbiol. 2005, 43:3114-3120.
-
(2005)
J. Clin. Microbiol.
, vol.43
, pp. 3114-3120
-
-
Meacci, F.1
-
61
-
-
0037389643
-
Rapid evolution of the neutralizing antibody response to HIV type 1 infection
-
Richman D.D., et al. Rapid evolution of the neutralizing antibody response to HIV type 1 infection. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:4144-4149.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 4144-4149
-
-
Richman, D.D.1
-
62
-
-
3543078012
-
HIV and SIV CTL escape: implications for vaccine design
-
Goulder P.J.R., Watkins D.I. HIV and SIV CTL escape: implications for vaccine design. Nat. Rev. Immunol. 2004, 4:630-640.
-
(2004)
Nat. Rev. Immunol.
, vol.4
, pp. 630-640
-
-
Goulder, P.J.R.1
Watkins, D.I.2
-
63
-
-
34247612265
-
Flying under the radar: the immunobiology of hepatitis C
-
Dustin L.B., Rice C.M. Flying under the radar: the immunobiology of hepatitis C. Annu. Rev. Immunol. 2007, 25:71-99.
-
(2007)
Annu. Rev. Immunol.
, vol.25
, pp. 71-99
-
-
Dustin, L.B.1
Rice, C.M.2
-
65
-
-
38849095682
-
Compartmentalization of the gut viral reservoir in HIV-1 infected patients
-
van Marle G., et al. Compartmentalization of the gut viral reservoir in HIV-1 infected patients. Retrovirology 2007, 4:87.
-
(2007)
Retrovirology
, vol.4
, pp. 87
-
-
van Marle, G.1
-
66
-
-
20344399376
-
The HIV coreceptor switch: a population dynamical perspective
-
Regoes R.R., Bonhoeffer S. The HIV coreceptor switch: a population dynamical perspective. Trends Microbiol. 2005, 13:269-277.
-
(2005)
Trends Microbiol.
, vol.13
, pp. 269-277
-
-
Regoes, R.R.1
Bonhoeffer, S.2
-
67
-
-
0036899166
-
Biological and biomedical implications of the coevolution of pathogens and their hosts
-
Woolhouse M.E.J., et al. Biological and biomedical implications of the coevolution of pathogens and their hosts. Nat. Genet. 2002, 32:569-577.
-
(2002)
Nat. Genet.
, vol.32
, pp. 569-577
-
-
Woolhouse, M.E.J.1
-
68
-
-
0018567632
-
Theoretical studies of clonal selection: minimal antibody repertoire size and reliability of self-non-self discrimination
-
Perelson A.S., Oster G.F. Theoretical studies of clonal selection: minimal antibody repertoire size and reliability of self-non-self discrimination. J. Theor. Biol. 1979, 81:645-670.
-
(1979)
J. Theor. Biol.
, vol.81
, pp. 645-670
-
-
Perelson, A.S.1
Oster, G.F.2
-
69
-
-
3142682239
-
Mapping the antigenic and genetic evolution of influenza virus
-
Smith D.J., et al. Mapping the antigenic and genetic evolution of influenza virus. Science 2004, 305:371-376.
-
(2004)
Science
, vol.305
, pp. 371-376
-
-
Smith, D.J.1
-
70
-
-
0031589843
-
Evolutionary pattern of intra-host pathogen antigenic drift: Effect of cross-reactivity in immune response
-
Haraguchi Y., Sasaki A. Evolutionary pattern of intra-host pathogen antigenic drift: Effect of cross-reactivity in immune response. Philos. Trans. R. Soc. Lond. B Biol. Sci. 1997, 352:11-20.
-
(1997)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.352
, pp. 11-20
-
-
Haraguchi, Y.1
Sasaki, A.2
-
71
-
-
48249088137
-
Dynamics of immune escape during HIV/SIV infection
-
Althaus C.L., De Boer R.J. Dynamics of immune escape during HIV/SIV infection. PLoS Comput. Biol. 2008, 4:e1000103.
-
(2008)
PLoS Comput. Biol.
, vol.4
-
-
Althaus, C.L.1
De Boer, R.J.2
-
72
-
-
0032554603
-
Virus dynamics: the effect of target cell limitation and immune responses on virus evolution
-
Regoes R.R., et al. Virus dynamics: the effect of target cell limitation and immune responses on virus evolution. J. Theor. Biol. 1998, 191:451-462.
-
(1998)
J. Theor. Biol.
, vol.191
, pp. 451-462
-
-
Regoes, R.R.1
-
73
-
-
2942670254
-
Optimizing within-host viral fitness: infected cell lifespan and virion production rate
-
Gilchrist M.A., et al. Optimizing within-host viral fitness: infected cell lifespan and virion production rate. J. Theor. Biol. 2004, 229:281-288.
-
(2004)
J. Theor. Biol.
, vol.229
, pp. 281-288
-
-
Gilchrist, M.A.1
-
74
-
-
34548696201
-
Modeling within-host evolution of HIV: mutation, competition and strain replacement
-
Ball C.L., et al. Modeling within-host evolution of HIV: mutation, competition and strain replacement. Bull. Math. Biol. 2007, 69:2361-2385.
-
(2007)
Bull. Math. Biol.
, vol.69
, pp. 2361-2385
-
-
Ball, C.L.1
-
75
-
-
0032492107
-
Target cell limited and immune control models of HIV infection: a comparison
-
De Boer R.J., Perelson A.S. Target cell limited and immune control models of HIV infection: a comparison. J. Theor. Biol. 1998, 190:201-214.
-
(1998)
J. Theor. Biol.
, vol.190
, pp. 201-214
-
-
De Boer, R.J.1
Perelson, A.S.2
|