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Volumn 22, Issue 5, 2009, Pages 1123-1132

The Price equation framework to study disease within-host evolution

Author keywords

Co evolution; Immune system; Infectious diseases; Trade offs; Within host dynamics

Indexed keywords

BACTERIUM; COEVOLUTION; EPIDEMIOLOGY; IMMUNE SYSTEM; INFECTIOUS DISEASE; LIFE HISTORY; NUMERICAL METHOD; QUANTITATIVE ANALYSIS; TRADE-OFF; VIRUS;

EID: 65249104614     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2009.01726.x     Document Type: Article
Times cited : (13)

References (54)
  • 1
    • 26244458950 scopus 로고    scopus 로고
    • Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients
    • Alfonso, V., Mbayed, V.A., Sookoian, S. Campos, R.H. 2005. Intra-host evolutionary dynamics of hepatitis C virus E2 in treated patients. J. Gen. Virol. 86 : 2781 2786.
    • (2005) J. Gen. Virol. , vol.86 , pp. 2781-2786
    • Alfonso, V.1    Mbayed, V.A.2    Sookoian, S.3    Campos, R.H.4
  • 2
    • 51549101406 scopus 로고    scopus 로고
    • Transmission-recovery trade-offs to study parasite evolution
    • Alizon, S. 2008. Transmission-recovery trade-offs to study parasite evolution. Am. Nat. 172 : E113 E121.
    • (2008) Am. Nat. , vol.172
    • Alizon, S.1
  • 3
    • 51549104964 scopus 로고    scopus 로고
    • Acute or chronic? Within-host models with immune dynamics, infection outcome and parasite evolution
    • Alizon, S. van Baalen, M. 2008. Acute or chronic? Within-host models with immune dynamics, infection outcome and parasite evolution. Am. Nat. 172 : E244 E256.
    • (2008) Am. Nat. , vol.172
    • Alizon, S.1    Van Baalen, M.2
  • 4
    • 0020335555 scopus 로고
    • Coevolution of hosts and parasites
    • Anderson, R.M. May, R.M. 1982. Coevolution of hosts and parasites. Parasitology 85 : 411 426.
    • (1982) Parasitology , vol.85 , pp. 411-426
    • Anderson, R.M.1    May, R.M.2
  • 5
    • 33745761195 scopus 로고    scopus 로고
    • Within-host evolution and virulence in microparasites
    • André, J.B. Godelle, B. 2006. Within-host evolution and virulence in microparasites. J. Theor. Biol. 241 : 402 409.
    • (2006) J. Theor. Biol. , vol.241 , pp. 402-409
    • André, J.B.1    Godelle, B.2
  • 6
    • 34548696201 scopus 로고    scopus 로고
    • Modeling within-host evolution of HIV: Mutation, competition and strain replacement
    • Ball, C.L., Gilchrist, M.A. Coombs, D. 2007. Modeling within-host evolution of HIV: mutation, competition and strain replacement. Bull. Math. Biol. 69 : 2361 2385.
    • (2007) Bull. Math. Biol. , vol.69 , pp. 2361-2385
    • Ball, C.L.1    Gilchrist, M.A.2    Coombs, D.3
  • 8
    • 0028122425 scopus 로고
    • Intra-host versus inter-host selection: Viral strategies of immune function impairment
    • Bonhoeffer, S. Nowak, M.A. 1994. Intra-host versus inter-host selection: viral strategies of immune function impairment. Proc. Natl. Acad. Sci. USA 91 : 8062 8066.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 8062-8066
    • Bonhoeffer, S.1    Nowak, M.A.2
  • 9
    • 0036711026 scopus 로고    scopus 로고
    • Does multiple infection select for raised virulence
    • Brown, S.P., Hochberg, M.E. Grenfell, B.T. 2002. Does multiple infection select for raised virulence. Trends Microbiol. 10 : 401 405.
    • (2002) Trends Microbiol. , vol.10 , pp. 401-405
    • Brown, S.P.1    Hochberg, M.E.2    Grenfell, B.T.3
  • 10
    • 0033823694 scopus 로고    scopus 로고
    • Kin selection and parasite evolution: Higher and lower virulence with hard and soft selection
    • Chao, L., Hanley, K.A., Burch, C.L., Dahlberg, C. Turner, P.E. 2000. Kin selection and parasite evolution: higher and lower virulence with hard and soft selection. Q. Rev. Biol. 75 : 261 275.
    • (2000) Q. Rev. Biol. , vol.75 , pp. 261-275
    • Chao, L.1    Hanley, K.A.2    Burch, C.L.3    Dahlberg, C.4    Turner, P.E.5
  • 11
    • 0026268536 scopus 로고
    • On conditions for evolutionary stability for a continuously varying character
    • Christiansen, F.B. 1991. On conditions for evolutionary stability for a continuously varying character. Am. Nat. 138 : 37 50.
    • (1991) Am. Nat. , vol.138 , pp. 37-50
    • Christiansen, F.B.1
  • 12
    • 34548544535 scopus 로고    scopus 로고
    • Insights from Price's equation into evolutionary epidemiology
    • In. Z. Feng. U. Dieckmann. S.A. Levin. eds), pp. Vol. 71 of DIMACS Series in Discrete Mathematics and Theoretical Computer Science, American Mathematical Society.
    • Day, T. Gandon, S. 2006. Insights from Price's equation into evolutionary epidemiology. In : Disease Evolution: Models, Concepts, and Data Analyses (Z. Feng, U. Dieckmann S.A. Levin, eds), pp. 23 44. Vol. 71 of DIMACS Series in Discrete Mathematics and Theoretical Computer Science, American Mathematical Society.
    • (2006) Disease Evolution: Models, Concepts, and Data Analyses , pp. 23-44
    • Day, T.1    Gandon, S.2
  • 13
    • 34548534990 scopus 로고    scopus 로고
    • Applying population-genetic models in theoretical evolutionary epidemiology
    • Day, T. Gandon, S. 2007. Applying population-genetic models in theoretical evolutionary epidemiology. Ecol. Lett. 10 : 876 888.
    • (2007) Ecol. Lett. , vol.10 , pp. 876-888
    • Day, T.1    Gandon, S.2
  • 14
    • 34548072504 scopus 로고    scopus 로고
    • A general theory for the evolutionary dynamics of virulence
    • Day, T. Proulx, S.R. 2004. A general theory for the evolutionary dynamics of virulence. Am. Nat. 163 : E40 E63.
    • (2004) Am. Nat. , vol.163
    • Day, T.1    Proulx, S.R.2
  • 15
    • 11844276093 scopus 로고    scopus 로고
    • Trade-off geometries and frequency-dependent selection
    • de Mazancourt, C. Dieckmann, U. 2004. Trade-off geometries and frequency-dependent selection. Am. Nat. 164 : 765 778.
    • (2004) Am. Nat. , vol.164 , pp. 765-778
    • De Mazancourt, C.1    Dieckmann, U.2
  • 16
    • 0003585551 scopus 로고    scopus 로고
    • Dieckmann, U. Metz, J.A.J. Sabelis, M.W. Sigmund, K. eds). Cambridge Studies in Adaptive Dynamics. Cambridge University Press. Cambridge, UK.
    • Dieckmann, U., Metz, J.A.J., Sabelis, M.W. Sigmund, K. (eds) 2002. Adaptive Dynamics of Infectious Diseases. In Pursuit of Virulence Management. Cambridge Studies in Adaptive Dynamics. Cambridge University Press, Cambridge, UK.
    • (2002) Adaptive Dynamics of Infectious Diseases. in Pursuit of Virulence Management.
  • 17
    • 35448985039 scopus 로고    scopus 로고
    • Clinical significance of human immunodeficiency virus type 1 replication fitness
    • Dykes, C. Demeter, L.M. 2007. Clinical significance of human immunodeficiency virus type 1 replication fitness. Clin. Microbiol. Rev. 20 : 550 578.
    • (2007) Clin. Microbiol. Rev. , vol.20 , pp. 550-578
    • Dykes, C.1    Demeter, L.M.2
  • 19
    • 0030093154 scopus 로고    scopus 로고
    • Models of parasite virulence
    • Frank, S.A. 1996. Models of parasite virulence. Q. Rev. Biol. 71 : 37 78.
    • (1996) Q. Rev. Biol. , vol.71 , pp. 37-78
    • Frank, S.A.1
  • 20
    • 36849064140 scopus 로고    scopus 로고
    • Variation in HIV-1 set-point viral load: Epidemiological analysis and an evolutionary hypothesis
    • Fraser, C., Hollingsworth, T.D., Chapman, R., de Wolf, F. Hanage, W.P. 2007. Variation in HIV-1 set-point viral load: epidemiological analysis and an evolutionary hypothesis. Proc. Natl. Acad. Sci. USA 104 : 17441 17446.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 17441-17446
    • Fraser, C.1    Hollingsworth, T.D.2    Chapman, R.3    De Wolf, F.4    Hanage, W.P.5
  • 22
    • 62749156097 scopus 로고    scopus 로고
    • Evolutionary epidemiology and the dynamics of adaptation
    • in press. doi:.
    • Gandon, S. Day, T. 2009. Evolutionary epidemiology and the dynamics of adaptation. Evolution, in press. doi :.
    • (2009) Evolution
    • Gandon, S.1    Day, T.2
  • 23
    • 0035856919 scopus 로고    scopus 로고
    • Imperfect vaccines and the evolution of pathogen virulence
    • Gandon, S., Mackinnon, M.J., Nee, S. Read, A.F. 2001. Imperfect vaccines and the evolution of pathogen virulence. Nature 414 : 751 756.
    • (2001) Nature , vol.414 , pp. 751-756
    • Gandon, S.1    MacKinnon, M.J.2    Nee, S.3    Read, A.F.4
  • 24
    • 33846631335 scopus 로고    scopus 로고
    • The relation between multilocus population genetics and social evolution theory
    • Gardner, A., West, S.A. Barton, N.H. 2007. The relation between multilocus population genetics and social evolution theory. Am. Nat. 169 : 207 226.
    • (2007) Am. Nat. , vol.169 , pp. 207-226
    • Gardner, A.1    West, S.A.2    Barton, N.H.3
  • 26
    • 2942670254 scopus 로고    scopus 로고
    • Optimizing within-host viral fitness: Infected cell lifespan and virion production rate
    • Gilchrist, M.A., Coombs, D. Perelson, A.S. 2004. Optimizing within-host viral fitness: infected cell lifespan and virion production rate. J. Theor. Biol. 229 : 281 288.
    • (2004) J. Theor. Biol. , vol.229 , pp. 281-288
    • Gilchrist, M.A.1    Coombs, D.2    Perelson, A.S.3
  • 27
    • 3543078012 scopus 로고    scopus 로고
    • HIV and SIV CTL escape: Implications for vaccine design
    • Goulder, P.J.R. Watkins, D.I. 2004. HIV and SIV CTL escape: implications for vaccine design. Nat. Rev. Immunol. 4 : 630 640.
    • (2004) Nat. Rev. Immunol. , vol.4 , pp. 630-640
    • Goulder, P.J.R.1    Watkins, D.I.2
  • 28
    • 0029706136 scopus 로고    scopus 로고
    • Darwinian adaptation, population genetics and the streetcar theory of evolution
    • Hammerstein, P. 1996. Darwinian adaptation, population genetics and the streetcar theory of evolution. J. Math. Biol. 34 : 511 532.
    • (1996) J. Math. Biol. , vol.34 , pp. 511-532
    • Hammerstein, P.1
  • 29
    • 0034283216 scopus 로고    scopus 로고
    • The role of cationic antimicrobial peptides in innate host defences
    • Hancock, R.E. Diamond, G. 2000. The role of cationic antimicrobial peptides in innate host defences. Trends Microbiol. 8 : 402 410.
    • (2000) Trends Microbiol. , vol.8 , pp. 402-410
    • Hancock, R.E.1    Diamond, G.2
  • 30
    • 0026647419 scopus 로고
    • Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient
    • Holmes, E.C., Zhang, L.Q., Simmonds, P., Ludlam, C.A. Brown, A.J. 1992. Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient. Proc. Natl. Acad. Sci. USA 89 : 4835 4839.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 4835-4839
    • Holmes, E.C.1    Zhang, L.Q.2    Simmonds, P.3    Ludlam, C.A.4    Brown, A.J.5
  • 31
    • 6344228566 scopus 로고    scopus 로고
    • Virus evolution within patients increases pathogenicity
    • Iwasa, Y., Michor, F. Nowak, M.A. 2005. Virus evolution within patients increases pathogenicity. J. Theor. Biol. 232 : 17 26.
    • (2005) J. Theor. Biol. , vol.232 , pp. 17-26
    • Iwasa, Y.1    Michor, F.2    Nowak, M.A.3
  • 32
    • 0345528049 scopus 로고    scopus 로고
    • A quasispecies approach to viral evolution in the context of an adaptive immune system
    • Kamp, C. 2003. A quasispecies approach to viral evolution in the context of an adaptive immune system. Microbes Infect. 5 : 1397 1405.
    • (2003) Microbes Infect. , vol.5 , pp. 1397-1405
    • Kamp, C.1
  • 33
    • 0037829294 scopus 로고    scopus 로고
    • Linking dynamical and population genetic models of persistent viral infection
    • Kelly, J.K., Williamson, S., Orive, M.E., Smith, M.S. Holt, R.D. 2003. Linking dynamical and population genetic models of persistent viral infection. Am. Nat. 162 : 14 28.
    • (2003) Am. Nat. , vol.162 , pp. 14-28
    • Kelly, J.K.1    Williamson, S.2    Orive, M.E.3    Smith, M.S.4    Holt, R.D.5
  • 34
    • 4344633752 scopus 로고    scopus 로고
    • A regulatory trade-off as a source of strain variation in the species Escherichia coli
    • King, T., Ishihama, A., Kori, A. Ferenci, T. 2004. A regulatory trade-off as a source of strain variation in the species Escherichia coli. J. Bacteriol. 186 : 5614 5620.
    • (2004) J. Bacteriol. , vol.186 , pp. 5614-5620
    • King, T.1    Ishihama, A.2    Kori, A.3    Ferenci, T.4
  • 35
    • 33750297873 scopus 로고    scopus 로고
    • HIV evolutionary dynamics within and among hosts
    • Lemey, P., Rambaut, A. Pybus, O.G. 2006. HIV evolutionary dynamics within and among hosts. AIDS Rev. 8 : 125 140.
    • (2006) AIDS Rev. , vol.8 , pp. 125-140
    • Lemey, P.1    Rambaut, A.2    Pybus, O.G.3
  • 36
    • 0028162164 scopus 로고
    • The evolution of virulence in parasites and pathogens - Reconciliation between two competing hypotheses
    • Lenski, R.E. May, R.M. 1994. The evolution of virulence in parasites and pathogens - reconciliation between two competing hypotheses. J. Theor. Biol. 169 : 253 265.
    • (1994) J. Theor. Biol. , vol.169 , pp. 253-265
    • Lenski, R.E.1    May, R.M.2
  • 37
    • 0028203644 scopus 로고
    • Short-sighted evolution and the virulence of pathogenic microorganisms
    • Levin, B.R. Bull, J.J. 1994. Short-sighted evolution and the virulence of pathogenic microorganisms. Trends Microbiol. 2 : 76 81.
    • (1994) Trends Microbiol. , vol.2 , pp. 76-81
    • Levin, B.R.1    Bull, J.J.2
  • 38
    • 0001342168 scopus 로고
    • Theory of fitness in a heterogeneous environment. I. the fitness set and adaptive function
    • Levins, R. 1962. Theory of fitness in a heterogeneous environment. I. The fitness set and adaptive function. Am. Nat. 96 : 361 373.
    • (1962) Am. Nat. , vol.96 , pp. 361-373
    • Levins, R.1
  • 40
    • 19344362376 scopus 로고    scopus 로고
    • Immunity promotes virulence evolution in a malaria model
    • Mackinnon, M.J. Read, A.F. 2004. Immunity promotes virulence evolution in a malaria model. PLoS. Biol. 2 : 1286 1292.
    • (2004) PLoS. Biol. , vol.2 , pp. 1286-1292
    • MacKinnon, M.J.1    Read, A.F.2
  • 41
    • 34548719708 scopus 로고
    • The logic of animal conflict
    • Maynard-Smith, J. Price, G.R. 1973. The logic of animal conflict. Nature 246 : 15 18.
    • (1973) Nature , vol.246 , pp. 15-18
    • Maynard-Smith, J.1    Price, G.R.2
  • 43
    • 49049118638 scopus 로고    scopus 로고
    • Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases
    • Mideo, N., Alizon, S. Day, T. 2008. Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases. Trends Ecol. Evol. 23 : 511 517.
    • (2008) Trends Ecol. Evol. , vol.23 , pp. 511-517
    • Mideo, N.1    Alizon, S.2    Day, T.3
  • 45
    • 0025639078 scopus 로고
    • The evolutionary dynamics of HIV-1 quasispecies and the development of immunodeficiency disease
    • Nowak, M.A., May, R.M. Anderson, R.M. 1990. The evolutionary dynamics of HIV-1 quasispecies and the development of immunodeficiency disease. AIDS 4 : 1095 1103.
    • (1990) AIDS , vol.4 , pp. 1095-1103
    • Nowak, M.A.1    May, R.M.2    Anderson, R.M.3
  • 46
    • 0035823272 scopus 로고    scopus 로고
    • Humans as the world's greatest evolutionary force
    • Palumbi, S.R. 2001. Humans as the world's greatest evolutionary force. Science 293 : 1786 1790.
    • (2001) Science , vol.293 , pp. 1786-1790
    • Palumbi, S.R.1
  • 47
    • 0036371443 scopus 로고    scopus 로고
    • Modelling viral and immune system dynamics
    • Perelson, A.S. 2002. Modelling viral and immune system dynamics. Nat. Rev. Immunol. 2 : 28 36.
    • (2002) Nat. Rev. Immunol. , vol.2 , pp. 28-36
    • Perelson, A.S.1
  • 48
    • 0014830535 scopus 로고
    • Selection and covariance
    • Price, G.R. 1970. Selection and covariance. Nature 227 : 520 521.
    • (1970) Nature , vol.227 , pp. 520-521
    • Price, G.R.1
  • 49
    • 0017384983 scopus 로고
    • General concepts on the evolutionary biology of parasites
    • Price, P.W. 1977. General concepts on the evolutionary biology of parasites. Evolution 31 : 405 420.
    • (1977) Evolution , vol.31 , pp. 405-420
    • Price, P.W.1
  • 50
    • 33748541658 scopus 로고    scopus 로고
    • Evolution of intrahost HIV-1 genetic diversity during chronic infection
    • Shriner, D., Liu, Y., Nickle, D.C. Mullins, J.I. 2006. Evolution of intrahost HIV-1 genetic diversity during chronic infection. Evolution 60 : 1165 1176.
    • (2006) Evolution , vol.60 , pp. 1165-1176
    • Shriner, D.1    Liu, Y.2    Nickle, D.C.3    Mullins, J.I.4
  • 51
    • 34249048365 scopus 로고    scopus 로고
    • Helicobacter pylori evolution and phenotypic diversification in a changing host
    • Suerbaum, S. Josenhans, C. 2007. Helicobacter pylori evolution and phenotypic diversification in a changing host. Nat. Rev. Microbiol. 5 : 441 452.
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 441-452
    • Suerbaum, S.1    Josenhans, C.2
  • 52
    • 34547402539 scopus 로고    scopus 로고
    • HIV diversity, recombination and disease progression: How does fitness "fit" into the puzzle
    • Tebit, D.M, Nankya, I., Arts, E.J. Gao, Y. 2007. HIV diversity, recombination and disease progression: how does fitness "fit" into the puzzle AIDS Rev. 9 : 75 87.
    • (2007) AIDS Rev. , vol.9 , pp. 75-87
    • Tebit, D.M.1    Nankya, I.2    Arts, E.J.3    Gao, Y.4
  • 54
    • 24944485118 scopus 로고    scopus 로고
    • Quasispecies theory in the context of population genetics. BMC Evol
    • Wilke, C.O. 2005. Quasispecies theory in the context of population genetics. BMC Evol. Biol. 5 : 44.
    • (2005) Biol. , vol.5 , pp. 44
    • Wilke, C.O.1


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