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Journal of Physical Chemistry B

Volumn 114, Issue 49, 2010, Pages 16223-16227

Desolvation penalty for burying hydrogen-bonded peptide groups in protein folding

(1) Baldwin, Robert L a

a STANFORD UNIVERSITY MEDICAL CENTER (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; ENTHALPY; HYDROCARBONS; HYDROGEN; HYDROPHOBICITY; LIQUIDS; PEPTIDES; PROTEIN FOLDING; VAN DER WAALS FORCES;

ALANINE PEPTIDE; DESOLVATION; ELECTROSTATIC CALCULATIONS; ENTHALPY CHANGE; HYDROPHOBIC INTERACTIONS; KEY FEATURE; LIQUID HYDROCARBONS; NH GROUPS; NONPOLAR GROUPS; PEPTIDE GROUPS; PROTEIN UNFOLDING; STABILIZING INTERACTIONS; THREE COMPONENT; VAN DER WAALS CONTRIBUTION; VAN DER WAALS INTERACTIONS;

HYDROGEN BONDS;

EID: 78650152836 PISSN: 15206106 EISSN: 15205207 Source Type: Journal
DOI: 10.1021/jp107111f Document Type: Article

Times cited : (20)

References (43)

1
- 0029094346
- Lazaridis, T.; Archontis, G.; Karplus, M. Adv. Protein Chem. 1995, 47, 231
- (1995) Adv. Protein Chem. , vol.47 , pp. 231
- Lazaridis, T.¹ Archontis, G.² Karplus, M.³

2
- 0029147930
- Makhatadze, G. I.; Privalov, P. L. Adv. Protein Chem. 1995, 47, 307
- (1995) Adv. Protein Chem. , vol.47 , pp. 307
- Makhatadze, G.I.¹ Privalov, P.L.²

3
- 0029957505
- Hilser, V. J.; Gómez, J.; Freire, E. Proteins: Struct., Funct., Genet. 1996, 26, 123
- (1996) Proteins: Struct., Funct., Genet. , vol.26 , pp. 123
- Hilser, V.J.¹ Gómez, J.² Freire, E.³

4
- 0000180763
- Baldwin, R. L. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 8069
- (1986) Proc. Natl. Acad. Sci. U.S.A. , vol.83 , pp. 8069
- Baldwin, R.L.¹

5
- 0029121068
- Yang, A.-S.; Honig, B. J. Mol. Biol. 1995, 252, 351
- (1995) J. Mol. Biol. , vol.252 , pp. 351
- Yang, A.-S.¹ Honig, B.²

6
- 0028929583
- Honig, B.; Yang, A.-S. Adv. Protein Chem. 1995, 46, 27
- (1995) Adv. Protein Chem. , vol.46 , pp. 27
- Honig, B.¹ Yang, A.-S.²

7
- 0034718590
- Avbelj, F.; Luo, P.; Baldwin, R. L. Proc. Natl. Acad. Sci. U.S. A. 2000, 97, 10786
- (2000) Proc. Natl. Acad. Sci. U.S. A. , vol.97 , pp. 10786
- Avbelj, F.¹ Luo, P.² Baldwin, R.L.³

8
- 0037022289
- Avbelj, F.; Baldwin, R. L. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 1309
- (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 1309
- Avbelj, F.¹ Baldwin, R.L.²

9
- 68149147539
- Jha, S. K.; Udgaonkar, J. B. Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 12289
- (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 12289
- Jha, S.K.¹ Udgaonkar, J.B.²

10
- 77950388103
- Reiner, A.; Henklein, P.; Kiefhaber, T. Proc. Natl. Acad. Sci. U.S.A. 2010, 107, 4955
- (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 4955
- Reiner, A.¹ Henklein, P.² Kiefhaber, T.³

11
- 77957970492
- Baldwin, R. L.; Frieden, C.; Rose, G. D. Proteins 2010, 78, 2725
- (2010) Proteins , vol.78 , pp. 2725
- Baldwin, R.L.¹ Frieden, C.² Rose, G.D.³

12
- 55949131241
- Hua, L.; Zhou, R.; Thirumalai, D.; Berne, B. J. Proc. Natl. Acad. Sci. U.S. A. 2008, 105, 16928
- (2008) Proc. Natl. Acad. Sci. U.S. A. , vol.105 , pp. 16928
- Hua, L.¹ Zhou, R.² Thirumalai, D.³ Berne, B.J.⁴

13
- 3042788225
- Gill, S. J.; Nichols, N. F.; Wadsö, I. J. Chem. Thermodyn. 1976, 8, 445
- (1976) J. Chem. Thermodyn. , vol.8 , pp. 445
- Gill, S.J.¹ Nichols, N.F.² Wadsö, I.³

14
- 0000082110
- Makhatadze, G. I.; Privalov, P. L. J. Chem. Thermodyn. 1988, 20, 405
- (1988) J. Chem. Thermodyn. , vol.20 , pp. 405
- Makhatadze, G.I.¹ Privalov, P.L.²

15
- 0008863560
- Kauzmann, W. Adv. Protein Chem. 1959, 14, 1
- (1959) Adv. Protein Chem. , vol.14 , pp. 1
- Kauzmann, W.¹

16
- 0026189147
- Lee, B. Biopolymers 1991, 31, 993
- (1991) Biopolymers , vol.31 , pp. 993
- Lee, B.¹

17
- 34447297323
- Baldwin, R. L. J. Mol. Biol. 2007, 371, 283
- (2007) J. Mol. Biol. , vol.371 , pp. 283
- Baldwin, R.L.¹

18
- 0039740776
- Wojcik, J.; Goral, J.; Pawlowski, K.; Bierzynski, A. Biochemistry 1997, 36, 680
- (1997) Biochemistry , vol.36 , pp. 680
- Wojcik, J.¹ Goral, J.² Pawlowski, K.³ Bierzynski, A.⁴

19
- 0037022332
- Lopez, M. M.; Chin, D.-H.; Baldwin, R. L.; Makhatadze, G. I. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 1298
- (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 1298
- Lopez, M.M.¹ Chin, D.-H.² Baldwin, R.L.³ Makhatadze, G.I.⁴

20
- 0038661095
- Goch, G.; Maciejczyk, M.; Olezczuk, M.; Stachowiak, D.; Malicka, J.; Bierzynski, A. Biochemistry 2003, 42, 6840
- (2003) Biochemistry , vol.42 , pp. 6840
- Goch, G.¹ MacIejczyk, M.² Olezczuk, M.³ Stachowiak, D.⁴ Malicka, J.⁵ Bierzynski, A.⁶

21
- 13444279887
- Richardson, J. M.; Lopez, M. M.; Makhatadze, G. I. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 1413
- (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 1413
- Richardson, J.M.¹ Lopez, M.M.² Makhatadze, G.I.³

22
- 0026319199
- Nicholls, A.; Sharp, K. A.; Honig, B. Proteins: Struct., Funct., Genet. 1991, 11, 281
- (1991) Proteins: Struct., Funct., Genet. , vol.11 , pp. 281
- Nicholls, A.¹ Sharp, K.A.² Honig, B.³

23
- 0036297743
- Loladze, V. V.; Ermolenko, D. N.; Makhatadze, G. I. J. Mol. Biol. 2002, 320, 343
- (2002) J. Mol. Biol. , vol.320 , pp. 343
- Loladze, V.V.¹ Ermolenko, D.N.² Makhatadze, G.I.³

24
- 0034633945
- Ratnaparkhi, G. S.; Varadarajan, R. Biochemistry 2000, 39, 12365
- (2000) Biochemistry , vol.39 , pp. 12365
- Ratnaparkhi, G.S.¹ Varadarajan, R.²

25
- 0024199422
- Privalov, P. L.; Gill, S. J. Adv. Protein Chem. 1988, 39, 191
- (1988) Adv. Protein Chem. , vol.39 , pp. 191
- Privalov, P.L.¹ Gill, S.J.²

26
- 0026487174
- Stickle, D. F.; Presta, L. G.; Dill, K. A.; Rose, G. D. J. Mol. Biol. 1992, 226, 1143
- (1992) J. Mol. Biol. , vol.226 , pp. 1143
- Stickle, D.F.¹ Presta, L.G.² Dill, K.A.³ Rose, G.D.⁴

27
- 32844457567
- Sitkoff, D.; Sharp, K. A.; Honig, B. J. Phys. Chem. 1994, 98, 1978
- (1994) J. Phys. Chem. , vol.98 , pp. 1978
- Sitkoff, D.¹ Sharp, K.A.² Honig, B.³

28
- 0001309459
- Della Gatta, G.; Barone, G.; Elia, V. J. Solution Chem. 1986, 15, 157
- (1986) J. Solution Chem. , vol.15 , pp. 157
- Della Gatta, G.¹ Barone, G.² Elia, V.³

29
- 3943103200
- Ben-Naim, A. J. Phys. Chem. 1978, 82, 792
- (1978) J. Phys. Chem. , vol.82 , pp. 792
- Ben-Naim, A.¹

30
- 0017855698
- Wolfenden, R. Biochemistry 1978, 17, 201
- (1978) Biochemistry , vol.17 , pp. 201
- Wolfenden, R.¹

31
- 62549159643
- Avbelj, F.; Baldwin, R. L. Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 3137
- (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 3137
- Avbelj, F.¹ Baldwin, R.L.²

32
- 33744500511
- Dannenberg, J. J. Phys. Chem. A 2006, 110, 5798
- (2006) J. Phys. Chem. A , vol.110 , pp. 5798
- Dannenberg, J.¹

33
- 0037370999
- Walsh, S. T. R.; Cheng, R. P.; Wright, W. W.; Alonso, D. O. V.; Daggett, V.; Vanderkooi, J. M.; DeGrado, W. F. Protein Sci. 2003, 12, 520
- (2003) Protein Sci. , vol.12 , pp. 520
- Walsh, S.T.R.¹ Cheng, R.P.² Wright, W.W.³ Alonso, D.O.V.⁴ Daggett, V.⁵ Vanderkooi, J.M.⁶ Degrado, W.F.⁷

34
- 33645286184
- Avbelj, F.; Baldwin, R. L. Proteins: Struct., Funct., Bioinf. 2006, 63, 283
- (2006) Proteins: Struct., Funct., Bioinf. , vol.63 , pp. 283
- Avbelj, F.¹ Baldwin, R.L.²

35
- 33745936149
- Della Gatta, G.; Usacheva, T.; Badea, E.; Palacz, B.; Ichim, D. J. Chem. Thermodyn. 2006, 38, 1054
- (2006) J. Chem. Thermodyn. , vol.38 , pp. 1054
- Della Gatta, G.¹ Usacheva, T.² Badea, E.³ Palacz, B.⁴ Ichim, D.⁵

36
- 0000159569
- Robertson, A. D.; Murphy, K. P. Chem. Rev. 1997, 97, 1251
- (1997) Chem. Rev. , vol.97 , pp. 1251
- Robertson, A.D.¹ Murphy, K.P.²

37
- 0029620316
- Creamer, T. P.; Srinivasan, R.; Rose, G. D. Biochemistry 1995, 34, 16245
- (1995) Biochemistry , vol.34 , pp. 16245
- Creamer, T.P.¹ Srinivasan, R.² Rose, G.D.³

38
- 85067719141
- Creamer, T. P.; Srinivasan, R.; Rose, G. D. Biochemistry 1997, 36, 2837
- (1997) Biochemistry , vol.36 , pp. 2837
- Creamer, T.P.¹ Srinivasan, R.² Rose, G.D.³

39
- 0026076664
- Sharp, K. A.; Nicholls, A.; Friedman, R.; Honig, B. Biochemistry 1991, 30, 9686
- (1991) Biochemistry , vol.30 , pp. 9686
- Sharp, K.A.¹ Nicholls, A.² Friedman, R.³ Honig, B.⁴

40
- 0343274684
- Chan, H. S.; Dill, K. A. Annu. Rev. Biophys. Biomol. Struct. 1997, 26, 425
- (1997) Annu. Rev. Biophys. Biomol. Struct. , vol.26 , pp. 425
- Chan, H.S.¹ Dill, K.A.²

41
- 0347753737
- Richardson, J. M.; Makhatadze, G. I. J. Mol. Biol. 2004, 335, 1029
- (2004) J. Mol. Biol. , vol.335 , pp. 1029
- Richardson, J.M.¹ Makhatadze, G.I.²

42
- 0000866128
- Spolar, R. S.; Ha, J.-H.; Record, M. T., Jr. Proc. Natl. Acad. Sci. U.S.A. 1989, 86, 8382
- (1989) Proc. Natl. Acad. Sci. U.S.A. , vol.86 , pp. 8382
- Spolar, R.S.¹ Ha, J.-H.² Record, Jr.M.T.³

43
- 0025906146
- Livingstone, J. R.; Spolar, R. S.; Record, M. T., Jr. Biochemistry 1991, 30, 4237
- (1991) Biochemistry , vol.30 , pp. 4237
- Livingstone, J.R.¹ Spolar, R.S.² Record, Jr.M.T.³

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