메뉴 건너뛰기




Volumn 48, Issue 12, 2010, Pages 4487-4494

Sensitive assay for quantification of hepatitis B virus mutants by use of a minor groove binder probe and peptide nucleic acids

Author keywords

[No Author keywords available]

Indexed keywords

LAMIVUDINE; PEPTIDE NUCLEIC ACID;

EID: 78650038247     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00731-10     Document Type: Article
Times cited : (10)

References (42)
  • 1
    • 0030818634 scopus 로고    scopus 로고
    • Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder
    • Afonina, I., M. Zivarts, I. Kutyavin, E. Lukhtanov, H. Gamper, and R. B. Meyer. 1997. Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder. Nucleic Acids Res. 25:2657-2660.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2657-2660
    • Afonina, I.1    Zivarts, M.2    Kutyavin, I.3    Lukhtanov, E.4    Gamper, H.5    Meyer, R.B.6
  • 2
    • 29944436855 scopus 로고    scopus 로고
    • Risk of hepatocellular carcinoma across a biological gradient of serum hepatitis B virus DNA level
    • Chen, C. J., H. I. Yang, J. Su, C. L. Jen, S. L. You, S. N. Lu, G. T. Huang, U. H. Iloeje, and R.-H. S. Grp. 2006. Risk of hepatocellular carcinoma across a biological gradient of serum hepatitis B virus DNA level. JAMA 295:65-73.
    • (2006) JAMA , vol.295 , pp. 65-73
    • Chen, C.J.1    Yang, H.I.2    Su, J.3    Jen, C.L.4    You, S.L.5    Lu, S.N.6    Huang, G.T.7    Iloeje, U.H.8    Grp, R.-H.S.9
  • 5
    • 0035041976 scopus 로고    scopus 로고
    • Molecular modeling and biochemical characterization reveal the mechanism of hepatitis B virus polymerase resistance to lamivudine (3TC) and emtricitabine (FTC)
    • Das, K., X. F. Xiong, H. L. Yang, C. E. Westland, C. S. Gibbs, S. G. Sarafianos, and E. Arnold. 2001. Molecular modeling and biochemical characterization reveal the mechanism of hepatitis B virus polymerase resistance to lamivudine (3TC) and emtricitabine (FTC). J. Virol. 75:4771-4779.
    • (2001) J. Virol. , vol.75 , pp. 4771-4779
    • Das, K.1    Xiong, X.F.2    Yang, H.L.3    Westland, C.E.4    Gibbs, C.S.5    Sarafianos, S.G.6    Arnold, E.7
  • 7
    • 0036242703 scopus 로고    scopus 로고
    • Rapid genotyping of single nucleotide polymorphisms using novel minor groove binding DNA oligonucleotides (MGB probes)
    • de Kok, J. B., E. T. G. Wiegerinck, B. A. J. Giesendorf, and D. W. Swinkels. 2002. Rapid genotyping of single nucleotide polymorphisms using novel minor groove binding DNA oligonucleotides (MGB probes). Hum. Mutat. 19:554-559.
    • (2002) Hum. Mutat. , vol.19 , pp. 554-559
    • De Kok, J.B.1    Wiegerinck, E.T.G.2    Giesendorf, B.A.J.3    Swinkels, D.W.4
  • 9
    • 32344435144 scopus 로고    scopus 로고
    • Dual-probe assay for detection of lamivudine-resistant hepatitis B virus by real-time PCR
    • Geng, H. F., B. Hua, H. Wang, Y. H. Cao, Y. Sun, and A. R. Yu. 2006. Dual-probe assay for detection of lamivudine-resistant hepatitis B virus by real-time PCR. J. Virol. Methods 132:25-31.
    • (2006) J. Virol. Methods , vol.132 , pp. 25-31
    • Geng, H.F.1    Hua, B.2    Wang, H.3    Cao, Y.H.4    Sun, Y.5    Yu, A.R.6
  • 12
    • 33644922997 scopus 로고    scopus 로고
    • Sensitive line probe assay that simultaneously detects mutations conveying resistance to lamivudine and adefovir
    • Hussain, M., S. Fung, E. Libbrecht, E. Sablon, C. Cursaro, P. Andreone, and A. S. F. Lok. 2006. Sensitive line probe assay that simultaneously detects mutations conveying resistance to lamivudine and adefovir. J. Clin. Microbiol. 44:1094-1097.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 1094-1097
    • Hussain, M.1    Fung, S.2    Libbrecht, E.3    Sablon, E.4    Cursaro, C.5    Andreone, P.6    Lok, A.S.F.7
  • 14
    • 0036022850 scopus 로고    scopus 로고
    • Detection of YMDD mutant using a novel sensitive method in chronic liver disease type B patients before and during lamivudine treatment
    • DOI 10.1016/S0168-8278(02)00145-9, PII S0168827802001459
    • Kirishima, T., T. Okanoue, Y. Daimon, Y. Itoh, H. Nakamura, A. Morita, T. Toyama, and M. Minami. 2002. Detection of YMDD mutant using a novel sensitive method in chronic liver disease type B patients before and during lamivudine treatment. J. Hepatol. 37:259-265. (Pubitemid 34833089)
    • (2002) Journal of Hepatology , vol.37 , Issue.2 , pp. 259-265
    • Kirishima, T.1    Okanoue, T.2    Daimon, Y.3    Itoh, Y.4    Nakamura, H.5    Morita, A.6    Toyama, T.7    Minami, M.8
  • 15
    • 0034056702 scopus 로고    scopus 로고
    • Development of a new method for detecting a mutation in the gene encoding hepatitis B virus reverse transcriptase active site (YMDD motif)
    • DOI 10.1016/S1386-6346(99)00061-3, PII S1386634699000613
    • Kobayashi, S., K. Shimada, H. Suzuki, K. Tanikawa, and M. Sata. 2000. Development of a new method for detecting a mutation in the gene encoding hepatitis B virus reverse transcriptase active site (YMDD motif). Hepatol. Res. 17:31-42. (Pubitemid 30129261)
    • (2000) Hepatology Research , vol.17 , Issue.1 , pp. 31-42
    • Kobayashi, S.1    Shimada, K.2    Suzuki, H.3    Tanikawa, K.4    Sata, M.5
  • 19
    • 0038723184 scopus 로고    scopus 로고
    • Enhanced allele-specific PCR discrimination in SNP genotyping using 3′ locked nucleic acid (LNA) primers
    • Latorra, D., K. Campbell, A. Wolter, and J. M. Hurley. 2003. Enhanced allele-specific PCR discrimination in SNP genotyping using 3′ locked nucleic acid (LNA) primers. Hum. Mutat. 22:79-85.
    • (2003) Hum. Mutat. , vol.22 , pp. 79-85
    • Latorra, D.1    Campbell, K.2    Wolter, A.3    Hurley, J.M.4
  • 21
    • 0023762809 scopus 로고
    • The development of cirrhosis patients with chronic type B hepatitis - A prospective study
    • Liaw, Y. F., D. I. Tai, C. M. Chu, and T. J. Chen. 1988. The development of cirrhosis patients with chronic type B hepatitis - a prospective study. Hepatology 8:493-496.
    • (1988) Hepatology , vol.8 , pp. 493-496
    • Liaw, Y.F.1    Tai, D.I.2    Chu, C.M.3    Chen, T.J.4
  • 22
    • 37249029182 scopus 로고    scopus 로고
    • Evolution of primary and compensatory lamivudine resistance mutations in chronic hepatitis B virus-infected patients during long-term lamivudine treatment, assessed by a line probe assay
    • Libbrecht, E., J. Doutreloigne, H. Van De Velde, M. F. Yuen, C. L. Lai, F. Shapiro, and E. Sablon. 2007. Evolution of primary and compensatory lamivudine resistance mutations in chronic hepatitis B virus-infected patients during long-term lamivudine treatment, assessed by a line probe assay. J. Clin. Microbiol. 45:3935-3941.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 3935-3941
    • Libbrecht, E.1    Doutreloigne, J.2    Van De Velde, H.3    Yuen, M.F.4    Lai, C.L.5    Shapiro, F.6    Sablon, E.7
  • 24
    • 33646578491 scopus 로고    scopus 로고
    • Quantitation of hepatitis B virus DNA by real-time PCR using internal amplification control and dual TaqMan MGB probes
    • Lole, K. S., and V. A. Arankalle. 2006. Quantitation of hepatitis B virus DNA by real-time PCR using internal amplification control and dual TaqMan MGB probes. J. Virol. Methods 135:83-90.
    • (2006) J. Virol. Methods , vol.135 , pp. 83-90
    • Lole, K.S.1    Arankalle, V.A.2
  • 25
    • 34250789265 scopus 로고    scopus 로고
    • Mutation analysis of lamivudine resistant hepatitis B virus strains by TaqMan PCR
    • DOI 10.1016/j.jviromet.2007.03.001, PII S016609340700095X
    • Malmstrom, S., C. Hannoun, and M. Lindh. 2007. Mutation analysis of lamivudine resistant hepatitis B virus strains by TaqMan PCR. J. Virol. Methods 143:147-152. (Pubitemid 46963385)
    • (2007) Journal of Virological Methods , vol.143 , Issue.2 , pp. 147-152
    • Malmstrom, S.1    Hannoun, C.2    Lindh, M.3
  • 27
    • 23044471083 scopus 로고    scopus 로고
    • Efficacy of lamivudine for preventing hepatocellular carcinoma in chronic hepatitis B: A multicenter retrospective study of 2795 patients
    • and the Inuyama Hepatitis Study Group
    • Matsumoto, A., E. Tanaka, A. Rokuhara, K. Kiyosawa, H. Kumada, M. Omata, K. Okita, N. Hayashi, T. Okanoue, S. Iino, K. Tanikawa, and the Inuyama Hepatitis Study Group. 2005. Efficacy of lamivudine for preventing hepatocellular carcinoma in chronic hepatitis B: a multicenter retrospective study of 2795 patients. Hepatol. Res. 32:173-184.
    • (2005) Hepatol. Res. , vol.32 , pp. 173-184
    • Matsumoto, A.1    Tanaka, E.2    Rokuhara, A.3    Kiyosawa, K.4    Kumada, H.5    Omata, M.6    Okita, K.7    Hayashi, N.8    Okanoue, T.9    Iino, S.10    Tanikawa, K.11
  • 29
    • 14844329880 scopus 로고    scopus 로고
    • Long-term follow-up of chronic hepatitis B after the emergence of mutations in the hepatitis B virus polymerase region
    • DOI 10.1111/j.1365-2893.2005.00559.x
    • Natsuizaka, M., S. Hige, Y. Ono, K. Ogawa, M. Nakanishi, M. Chuma, S. Yoshida, and M. Asaka. 2005. Long-term follow-up of chronic hepatitis B after the emergence of mutations in the hepatitis B virus polymerase region. J. Viral Hepat. 12:154-159. (Pubitemid 40342173)
    • (2005) Journal of Viral Hepatitis , vol.12 , Issue.2 , pp. 154-159
    • Natsuizaka, M.1    Hige, S.2    Ono, Y.3    Ogawa, K.4    Nakanishi, M.5    Chuma, M.6    Yoshida, S.7    Asaka, M.8
  • 30
    • 1542364291 scopus 로고    scopus 로고
    • Identification of rare polymerase variants of hepatitis B virus using a two-stage PCR with peptide nucleic acid clamping
    • Ohishi, W., H. Shirakawa, Y. Kawakami, S. Kimura, M. Kamiyasu, S. Tazuma, T. Nakanishi, and K. Chayama. 2004. Identification of rare polymerase variants of hepatitis B virus using a two-stage PCR with peptide nucleic acid clamping. J. Med. Virol. 72:558-565.
    • (2004) J. Med. Virol. , vol.72 , pp. 558-565
    • Ohishi, W.1    Shirakawa, H.2    Kawakami, Y.3    Kimura, S.4    Kamiyasu, M.5    Tazuma, S.6    Nakanishi, T.7    Chayama, K.8
  • 32
    • 11844289530 scopus 로고    scopus 로고
    • Quantification of the newly detected lamivudine resistant YSDD variants of hepatitis B virus using molecular beacons
    • Pas, S. D., S. Noppornpanth, A. A. van der Eijk, R. A. de Man, and H. G. M. Niesters. 2005. Quantification of the newly detected lamivudine resistant YSDD variants of hepatitis B virus using molecular beacons. J. Clin. Virol. 32:166-172.
    • (2005) J. Clin. Virol. , vol.32 , pp. 166-172
    • Pas, S.D.1    Noppornpanth, S.2    Van Der Eijk, A.A.3    De Man, R.A.4    Niesters, H.G.M.5
  • 33
    • 2442680071 scopus 로고    scopus 로고
    • Quantitation of hepatitis B lamivudine resistant mutants by real-time amplification refractory mutation system PCR
    • DOI 10.1016/S0168-8278(04)00062-5, PII S0168827804000625
    • Punia, P., P. Cane, C. G. Te, and N. Saunders. 2004. Quantitation of hepatitis B lamivudine resistant mutants by real-time amplification refractory mutation system PCR. J. Hepatol. 40:986-992. (Pubitemid 38670133)
    • (2004) Journal of Hepatology , vol.40 , Issue.6 , pp. 986-992
    • Punia, P.1    Cane, P.2    Teo, C.-G.3    Saunders, N.4
  • 34
    • 56349134321 scopus 로고    scopus 로고
    • Understanding the molecular basis of HBV drug resistance by molecular modeling
    • Sharon, A., and C. K. Chu. 2008. Understanding the molecular basis of HBV drug resistance by molecular modeling. Antivir. Res. 80:339-353.
    • (2008) Antivir. Res. , vol.80 , pp. 339-353
    • Sharon, A.1    Chu, C.K.2
  • 35
    • 32444435768 scopus 로고    scopus 로고
    • HBV drug resistance: Mechanisms, detection and interpretation
    • DOI 10.1016/j.jhep.2006.01.001, PII S016882780600002X
    • Shaw, T., A. Bartholomeusz, and S. Locarnini. 2006. HBV drug resistance: mechanisms, detection and interpretation. J. Hepatol. 44:593-606. (Pubitemid 43227885)
    • (2006) Journal of Hepatology , vol.44 , Issue.3 , pp. 593-606
    • Shaw, T.1    Bartholomeusz, A.2    Locarnini, S.3
  • 36
    • 59649083962 scopus 로고    scopus 로고
    • Use of massively parallel ultradeep pyrosequencing to characterize the genetic diversity of hepatitis B virus in drug-resistant and drug-naïve patients and to detect minor variants in reverse transcriptase and hepatitis B S antigen
    • Solmone, M., D. Vincenti, M. C. F. Prosperi, A. Bruselles, G. Ippolito, and M. R. Capobianchi. 2009. Use of massively parallel ultradeep pyrosequencing to characterize the genetic diversity of hepatitis B virus in drug-resistant and drug-naïve patients and to detect minor variants in reverse transcriptase and hepatitis B S antigen. J. Virol. 83:1718-1726.
    • (2009) J. Virol. , vol.83 , pp. 1718-1726
    • Solmone, M.1    Vincenti, D.2    Prosperi, M.C.F.3    Bruselles, A.4    Ippolito, G.5    Capobianchi, M.R.6
  • 38
    • 33845296607 scopus 로고    scopus 로고
    • Multiplex locked nucleic acid probes for analysis of hepatitis B virus mutants using real-time PCR
    • Sun, Z., L. F. Zhou, H. Y. Zeng, Z. Chen, and H. H. Zhu. 2007. Multiplex locked nucleic acid probes for analysis of hepatitis B virus mutants using real-time PCR. Genomics 89:151-159.
    • (2007) Genomics , vol.89 , pp. 151-159
    • Sun, Z.1    Zhou, L.F.2    Zeng, H.Y.3    Chen, Z.4    Zhu, H.H.5
  • 41
    • 13244290101 scopus 로고    scopus 로고
    • Detection of hepatitis B virus DNA by real-time PCR using TaqMan-MGB probe technology
    • Zhao, J. R., Y. J. Bai, Q. H. Zhang, Y. Wan, D. Li, and X. J. Yan. 2005. Detection of hepatitis B virus DNA by real-time PCR using TaqMan-MGB probe technology. World J. Gastroenterol. 11:508-510.
    • (2005) World J. Gastroenterol. , vol.11 , pp. 508-510
    • Zhao, J.R.1    Bai, Y.J.2    Zhang, Q.H.3    Wan, Y.4    Li, D.5    Yan, X.J.6
  • 42
    • 70350095437 scopus 로고    scopus 로고
    • Hepatitis B virus resistance to nucleos(t)ide analogues
    • Zoulim, F., and S. Locarnini. 2009. Hepatitis B virus resistance to nucleos(t)ide analogues. Gastroenterology 137:1593-1608.
    • (2009) Gastroenterology , vol.137 , pp. 1593-1608
    • Zoulim, F.1    Locarnini, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.