Origin and evolution of the South American endemic Artemisia species (Asteraceae): Evidence from molecular phylogeny, ribosomal DNA and genome size data

Australian Journal of Botany

Volumn 58, Issue 7, 2010, Pages 605-616

  Pellicer, Jaume ^a,b   Garnatje, Teresa ^c   Molero, Julián ^a   Pustahija, Fatima ^d,e   Siljak Yakovlev, Sonja ^d   Vallès, Joan ^a  

^a UNIVERSITY OF BARCELONA   (Spain)

^b JODRELL LABORATORY   (United Kingdom)

^c INSTITUT BOTÀNIC DE BARCELONA IBB CSIC ICUB   (Spain)

^d Ecophysiologie Veg   (France)

^e UNIVERSITY OF SARAJEVO   (Bosnia and Herzegovina)

Author keywords

[No Author keywords available]

Indexed keywords

DICOTYLEDON; ENDEMIC SPECIES; GENOME; HYBRIDIZATION; PHYLOGENETICS; PHYLOGENY; TAXONOMY;

BERING STRAIT; SOUTH AMERICA;

ARTEMISIA; ARTEMISIA BIENNIS; ASTERACEAE;

EID: 78149286888     PISSN: 00671924     EISSN: None     Source Type: Journal    
DOI: 10.1071/BT10047     Document Type: Article

References (63)

1. Álvarez I, Wendel JF (2003) Ribosomal ITS sequences and plant phylogenetic inference. Molecular Phylogenetics and Evolution 29, 417-434. doi:10.1016/S1055-7903 (03) 00208-2
2. Ariza L (1997) Asteraceae. Tribu VII, Anthemideae. In 'Flora Fanerogámica Argentina'. (Ed. AT Hunziker) pp. 9-15. (CONICET: Córdoba, Argentina)
3. Baldwin BG, Markos S (1998) Phylogenetic utility of the external transcribed spacer (ETS) of 18S-26S rDNA: congruence of ITS and ETS trees of Calycadenia (Compositae). Molecular Phylogenetics and Evolution 10, 449-463. doi:10.1006/mpev. 1998.0545
4. Baldwin BG, Sanderson MJ, Porter JM, Wojciechowski MF, Campbell CS, Donoghue MJ (1995) The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Annals of the Missouri Botanical Garden 82, 247-277. doi:10.2307/2399880
5. Bennett MD, Leitch IJ (2005) Plant genome size research: a field in focus. Annals of Botany 95, 1-6. doi:10.1093/aob/mci001 (Pubitemid 41214448)
6. Bremer K, Humphries CJ (1993) Generic monograph of the Asteraceae-Anthemideae. Bulletin of the Natural History Museum of London (Botany) 23, 71-177.
7. Cabrera A (1971) Compositae. In 'Flora Patagonica, parte VII'. (Ed. M Correa) pp. 173-175. (Instituto Nacional de Tecnología Agropecuaria: Buenos Aires, Argentina)
8. Candolle AP (1837) 'Prodromus systematis naturalis regni vegetabilis. Vol. 6.' (Paris)
9. Catalán P, Kellogg EA, Olmstead RG (1997) Phylogeny of Poaceae subfamily Pooideae based on chloroplast ndhF gene sequences. Molecular Phylogenetics and Evolution 8, 150-166. doi:10.1006/mpev. 1997.0416
10. Cheng ZJ, Murata M (2003) A centromeric tandem repeat family originating from a part of Ty3/gypsy-retroelement in wheat and its relatives. Genetics 164, 665-672.
11. Darlu P, Lecointre G (2002) When does the incongruence length difference test fail? Molecular Biology and Evolution 19, 432-437.
12. Doležel J, Bartoš J, Voglmayr H, Greilhuber J (2003) Nuclear DNA content and genome size of trout and human. Cytometry 51, 127-128.
13. Dowton M, Austin AD (2002) Increased incongruence does not necessarily indicate increased phylogenetic accuracy. Systematic Biology 51, 19-31. doi:10.1080/106351502753475853 (Pubitemid 35169405)
14. Farris JS, Källersjö M, Kluge AG, Bult C (1994) Testing significance of incongruence. Cladistics 10, 315-319. doi:10.1111/j.1096-0031. 1994.tb00181.x
15. Galbraith DW, Harkins KR, Maddox JM, Ayres NM, Sharma DP, Firoozabady E (1983) Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 220, 1049-1051. doi:10.1126/science.220.4601.1049
16. Garcia S, Garnatje T, Hidalgo O, McArthur ED, Siljak-Yakovlev S, Vallès J (2007) Extensive ribosomal DNA (18S-5.8S-26S and 5S) colocalization in the North American endemic sagebrushes (subgenus Tridentatae, Artemisia, Asteraceae) revealed by FISH. Plant Systematics and Evolution 267, 79-92. doi:10.1007/s00606-007-0558-6 (Pubitemid 47402427)
17. Garcia S, Canela MÁ, Garnatje T, McArthur ED, Pellicer J, Sanderson SC, Vallès J (2008) Evolutionary and ecological implications of genome size in the North American endemic sagebrushes and allies (Artemisia, Asteraceae). Biological Journal of the Linnean Society. Linnean Society of London 94, 631-649. doi:10.1111/j.1095-8312.2008.01001.x (Pubitemid 351841658)
18. Garcia S, Garnatje T, Pellicer J, McArthur ED, Siljak-Yakovlev S, Vallès J (2009a) Ribosomal DNA, heterochromat in and correlation with genome size in diploid and polyploid North American endemic sagebrushes (Artemisia, Asteraceae). Genome 52, 1012-1024. doi:10.1139/G09-077
19. Garcia S, Lim KY, Chester M, Garnatje T, Pellicer J, Vallès J, Leitch AR, Kovarík A (2009b) Linkage of 35S and 5S rRNA genes in Artemisia (family Asteraceae): first evidence from angiosperms. Chromosoma 118, 85-97. doi:10.1007/s00412-008-0179-z
20. Garnatje T, Garcia S, Vilatersana R, Vallès J (2006) Genome size variation in the genus Carthamus L. (Asteraceae, Cardueae): systematic implications and additive changes during allopolyploidization in hybrid taxa. Annals of Botany 97, 461-467. doi:10.1093/aob/mcj050 (Pubitemid 43288756)
21. Garnatje T, Garcia S, Canela MÁ (2007) Genome size variation from a phylogenetic perspective in the genus Cheirolophus Cass. (Asteraceae): biogeographic implications. Plant Systematics and Evolution 264, 117-134. doi:10.1007/s00606-006-0489-7 (Pubitemid 46348745)
22. Gerlach WL, Bedbrook JR (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Research 7, 1869-1885. doi:10.1093/nar/7.7.1869
23. Gerlach WL, Dyer TA (1980) Sequence organization of the repeating units in the nucleus of wheat which contain 5S rRNA genes. Nucleic Acids Research 8, 4851-4865. doi:10.1093/nar/8.21.4851
24. Greilhuber J (2005) Intraspecific variation in genome size: identifying its existence. Annals of Botany 95, 91-98. doi:10.1093/aob/mci004 (Pubitemid 41214451)
25. Hamon P, Siljak-Yakovlev S, Srisuwan S, Robin O, Poncet V, Hamon S, de Kochko A (2009) Physical mapping of rDNA and heterochromatin in chromosomes of 16 Coffea species: a revised view of species differentiation. Chromosome Research 17, 291-304. doi:10.1007/s10577-009-9033-2
26. Heslop-Harrison JS, Schwarzacher T, Anamthawat-Jonson K, Leitch AR, Shi M, Leitch IJ (1991) In situ hybridization with automated chromosome denaturation. Technique 3, 109-116.
27. Hoshi Y, Matoba H, Kondo K (2006) Physical mapping of ribosomal RNA genes in the genus Artemisia L. (Asteraceae). Caryologia 59, 312-318.
28. Jeffrey C (1995) Compositae systematics 1975-1993. Developments and desiderata. In Advances in Compositae Systematics'. (Eds DJN Hind, C Jeffrey, GV Pope) pp. 7-21. (Royal Botanic Gardens: Kew)
29. Kawatani T, Ohno T (1964) Chromosome numbers in Artemisia. Bulletin of the National Institute of Hygienic Sciences 82, 183-193.
30. Kegode GO, Christoffers MJ (2003) Biennial wormwood (Artemisia biennis Willd.). Weed Technology 17, 646-649. doi:10.1614/0890-037X (2003) 017[0646:BWABW]2.0. CO;2
31. Kornkven AB, Watson L, Estes J (1999) A molecular phylogeny of Artemisia sect. Tridentatae (Asteraceae) based on chloroplast DNA restriction site variation. Systematic Botany 24, 69-84. doi:10.2307/2419387
32. Lee MSY (2001) Uninformative characters and apparent conflict between molecules and morphology. Molecular Biology and Evolution 18, 676-680.
33. Leitch AR, Leitch IJ (2008) Genomic plasticity and the diversity of polyploid plants. Science 320, 481-483. doi:10.1126/science.1153585 (Pubitemid 351590629)
34. Leitch IJ, Bennett MD (2004) Genome downsizing in polyploid plants. Biological Journal of the Linnean Society. Linnean Society of London 82, 651-663. doi:10.1111/j.1095-8312.2004.00349.x (Pubitemid 39123351)
35. Lim KY, Kovařík A, Matyásek R, Chase MW, Clarkson JJ, Grandbastien MA, Leitch AR (2007) The sequence of events leading to Nicotiana genome turnover in less than five million years. The New Phytologist 175, 756-763. doi:10.1111/j.1469-8137.2007.02121.x (Pubitemid 47222622)
36. Ling YR (1991) The Old World Seriphidium (Compositae). Bulletin of Botanical Research 11, 1-40.
37. Ling YR (1995) The New World Artemisia L. In 'Advances in Compositae Systematics'. (Eds DJN Hind, C Jeffrey, GV Pope) pp. 255-281. (Royal Botanic Gardens: Kew)
38. Marie D, Brown SC (1993) A cytometric exercise in plant DNA histograms, with 2C values for 70 species. Biology of the Cell 78, 41-51. doi:10.1016/0248-4900 (93) 90113-S
39. Matyásek R, Lim KY, Kovařík A, Leitch AR (2003) Ribosomal DNA evolution and gene conversion in Nicotiana rustica. Heredity 91, 268-275. doi:10.1038/sj.hdy.6800333 (Pubitemid 37181401)
40. McArthur ED, Plummer AP (1978) Biogeography and management of native Western shrubs: a case study, section Tridentatae of Artemisia. Great Basin Naturalist Memoirs 2, 229-243.
41. McArthur ED, Pope CL, Freeman DC (1981) Chromosomal studies of subgenus Tridentatae of Artemisia: evidence for autopolyploidy. American Journal of Botany 68, 589-605. doi:10.2307/2442786
42. Moore DM (1981) Chromosome numbers of Fuegian angiosperms. Boletim da Sociedade Broteriana 53, 995-1012.
43. Nelsen MP, Gargas A (2008) Dissociation and horizontal transmission of codispersing lichen symbionts in the genus Lepraria (Lecanorales: Stereocaulaceae). The New Phytologist 177, 264-275. doi:10.1111/j.1469-8137. 2007.02241.x (Pubitemid 350221993)
44. Nylander JAA (2004) 'MrModeltest v2. Program distributed by the author.' (Evolutionary Biology Centre, Uppsala University)
45. Oberprieler Ch, Himmelreich S, Källersjö M, Vallès J, Watson LE, Vogt R (2009) Tribe Anthemideae. In ' Systematics, Evolution and Biogeography of the Compositae'. (Eds VA Funk, A Susanna, T Stuessy, R Bayer) pp. 632-666. (International Association for Plant Taxonomy: Washington, DC)
46. Pellicer J, Garcia S, Garnatje T, Hidalgo O, Korobkov AA, Dariimaa Sh, Vallès J (2007) Chromosome counts in Asian Artemisia L. (Asteraceae) species: from diploids to the first report of the highest polyploid in the genus. Botanical Journal of the Linnean Society 153, 301-310. doi:10.1111/j.1095-8339.2007.00611.x (Pubitemid 46340669)
47. Pellicer J, Garcia S, Garnatje T, Hidalgo O, Siljak-Yakovlev S, Vallès J (2008) Molecular cytogenetic characterization of some representatives of the subgenera Artemisia and Absinthium (genus Artemisia, Asteraceae). Collectanea Botanica (Barcelona) 27, 13-21. doi:10.3989/collectbot
48. Pellicer J, Garcia S, Canela MA, Garnatje T, Korobkov AA, Twibell JD, Vallès J (2010) Genome size dynamics in Artemisia: following the track of polyploidy. Plant Biology 12, 820-830. doi:10.1111/j.1438-8677.2009.00268.x
49. Pires JC, Lim KY, Kovafík A, Matyásek R, Boyd A, Leitch AR, Leitch IJ, Bennett MD, Soltis PS, Soltis DE (2004) Molecular cytogenetic analysis of recently evolved Tragopogon (Asteraceae) allopolyploids reveal a karyotype that is additive of the diploid progenitors. American Journal of Botany 91, 1022-1035. doi:10.3732/ajb.91.7.1022
50. Price HJ, Dillon SL, Hodnett G, Rooney WL, Ross L, Johnston JS (2005) Genome evolution in the genus Sorghum (Poaceae). Annals of Botany 95, 219-227. doi:10.1093/aob/mci015 (Pubitemid 41214462)
51. Roig FA (2002) 'Flora Medicinal Mendozina.' (EDIUN: Argentina)
52. Roig FA, Ambrosetti JA (1989) El género Artemisia (Compositae) en la Sierra del Paramillo, Mendoza y una nueva variedad de A. mendozana DC. Parodiana 5, 363-373.
53. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574. doi:10.1093/ bioinformatics/btg180 (Pubitemid 37038874)
54. Sanz M, Vilatersana R, Hidalgo O, Garcia-Jacas N, Susanna A, Schneeweiss G, Vallès J (2008) Molecular phylogeny and evolution of floral characters of Artemisia and allies (Anthemideae, Asteraceae): evidences from nrDNA ETS and ITS sequences. Taxon 57, 66-78.
55. Schneeweiss GM, Colwell A, Park JM, Jang CG, Stuessy TF (2004) Phylogeny of holoparasitic Orobanche (Orobanchaceae) inferred from nuclear ITS sequences. Molecular Phylogenetics and Evolution 30, 465-478. doi:10.1016/S1055-7903 (03) 00210-0
56. Schweizer D (1976) Reverse fluorescent chromosome banding with chromomycin and DAPI. Chromosoma 58, 307-324. doi:10.1007/BF00292840
57. Siljak-Yakovlev S, Cerbah M, Coulaud J, Stoian V, Brown SC, Jelenic S, Papes D (2002) Nuclear DNA content, base composition, heterochromatin and rDNA in Picea omorika and Picea abies. Theoretical and Applied Genetics 104, 505-512. doi:10.1007/s001220100755 (Pubitemid 36065081)
58. *and Other Methods). Version 4.' (Sinauer Associates: Sunderland, Massachusetts)
59. Tkach N, Hoffmann MH, Röser M, Korobkov AA, Hagen KB (2008) Parallel evolutionary patterns in multiple lineages of Arctic Artemisia L. (Asteraceae). Evolution 62, 184-198. doi:10.1111/j.1558-5646.2007.00270.x
60. Torrell M, Cerbah M, Siljak-Yakovlev S, Vallès J (2003) Molecular cytogenetics of the genus Artemisia (Asteraceae, Anthemideae): fluorochrome banding and fluorescent in situ hybridization. I. Subgenus Seriphidium and related taxa. Plant Systematics and Evolution 239, 141-153. doi:10.1007/s00606- 002-0259-0 (Pubitemid 36946796)
61. Vallès J, Garnatje T (2005) Artemisia and its allies: genome organization and evolution and their biosystematic, taxonomic, and phylogenetic implications in the Artemisiinae and related subtribes (Asteraceae, Anthemideae). In 'Plant genome: biodiversity and evolution, vol. 1B, phanerogams'. (Eds AK Sharma, A Sharma) pp. 255-285. (M/S Science Publishers: Enfield)
62. Vinogradov AE (2003) Selfish DNA is maladaptive: evidence from the plant Red List. Trends in Genetics 19, 609-614. doi:10.1016/j.tig.2003.09.010 (Pubitemid 37338380)
63. Zuloaga FO, Morrone O, Belgrano MJ (Eds) (2008) 'Catálogo de las Plantas Vasculares del Cono Sur (Argentina, Sur de Brasil, Chile, Paraguay y Uruguay). Vol. 2.' (Missouri Botanical Garden and IBODA-CONICET: St. Louis, Missouri)