Evolutionary and ecological implications of genome size in the North American endemic sagebrushes and allies (Artemisia, Asteraceae)

Biological Journal of the Linnean Society

Volumn 94, Issue 3, 2008, Pages 631-649

  Garcia, Sònia ^a   Canela, Miguel Á ^a   Garnatje, Teresa ^b   Mcarthur, E Durant ^c   Pellicer, Jaume ^a   Sanderson, Stewart C ^c   Vallès, Joan ^a  

^a UNIVERSITY OF BARCELONA   (Spain)

^b INSTITUT BOTÀNIC DE BARCELONA IBB CSIC ICUB   (Spain)

^c U S DEPARTMENT OF AGRICULTURE   (United States)

Author keywords

C value; Compositae; Hybridization; Polyploidy; R K selection; Reticulate evolution; Speciation; Tridentatae; Weed

Indexed keywords

ANGIOSPERM; DNA; ENDEMIC SPECIES; EVOLUTION; FLOW CYTOMETRY; GENOME; HYBRIDIZATION; MORPHOLOGY; PHYLOGENETICS; SELECTION; SPECIATION (BIOLOGY); TAXONOMY; WEED;

NORTH AMERICA;

ARTEMISIA; ARTEMISIA BIGELOVII; ARTEMISIA PYGMAEA; ARTEMISIA RIGIDA; ASTERACEAE;

EID: 45249114401     PISSN: 00244066     EISSN: 10958312     Source Type: Journal    
DOI: 10.1111/j.1095-8312.2008.01001.x     Document Type: Article

References (75)

1. Barker JR, McKell CM. 1986. Differences in big sagebrush (A. tridentata) plant stature along soil-water gradients; genetic components. Journal of Range Management 39 : 147 151.
2. Beetle AA. 1960. A study of sagebrush. The section Tridentatae of Artemisia. Bulletin 368. Laramie, WY : University of Wyoming Experiment Station.
3. Bennett MD, Leitch IJ. 2005a. Angiosperm DNA C-values database. Available at: http://www.rbgkew.org.uk/cval/homepage.html (Release 4.0).
4. Bennett MD, Leitch IJ. 2005b. Genome size evolution in plants. In : Gregory TR, ed. The evolution of the genome. San Diego : Elsevier Academic Press, 90 151.
5. Bennett MD, Leitch IJ. 2005c. Plant genome size research: a field in focus. Annals of Botany 95 : 1 6.
6. Bennetzen JL. 2005. Transposable elements, gene creation and genome rearrangement in flowering plants. Current Opinion in Genetics and Development 15 : 1 7.
7. Bennetzen JL, Ma J, Devos KM. 2005. Mechanisms of recent genome size variation in flowering plants. Annals of Botany 95 : 127 132.
8. Biémont C, Vieira C. 2006. Junk DNA as an evolutionary force. Nature 443 : 521 524.
9. Bremer K, Humphries CJ. 1993. Generic monograph of the Asteraceae - Anthemideae. Bulletin of the Natural History Museum of London (Botany) 23 : 71 177.
10. Cronquist A. 1994. Asterales. In : Cronquist AH Holmgren NH Reveal JL Holmgren PK, eds, Intermountain flora, vol. 5. Bronx, NY : New York Botanical Garden.
11. Cullis AC. 2005. Mechanisms and control of rapid genomic changes in flax. Annals of Botany 95 : 201 206.
12. Doležel J, Bartoš J. 2005. Plant DNA flow cytometry and estimation of nuclear genome size. Annals of Botany 95 : 99 110.
13. Doležel J, Bartoš J, Voglmayr H, Greilhuber J. 2003. Nuclear DNA content and genome size of trout and human. Cytometry 51 : 127 128.
14. Flegr J. 1997. Two distinct types of natural selection in turbidostat-like and chemostat-like ecosystems. Journal of Theoretical Biology 188 : 121 126.
15. Galbraith DW, Harkins KR, Maddox JM, Ayres NM, Sharma DP, Firoozabady E. 1983. Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 220 : 1049 1055.
16. Garcia S, Garnatje T, Hidalgo O, McArthur ED, Siljak-Yakovlev S, Vallès J. in press. Extensive ribosomal DNA (18S-5.8S-26S and 5S) colocalization in the North American endemic sagebrushes (subgenus Tridentatae, Artemisia, Asteraceae) revealed by FISH. Plant Systematics and Evolution (in press).
17. Garcia S, Garnatje T, Twibell JD, Vallès J. 2006. Genome size variation in the A. arborescens complex (Asteraceae, Anthemideae) and cultivars. Genome 49 : 244 253.
18. Garcia S, Sanz M, Garnatje T, Kreitschitz A, McArthur ED, Vallès J. 2004. Variation of DNA amount of 47 populations of the subtribe Artemisiinae and related taxa (Asteraceae, Anthemideae): karyological, ecological and systematic implications. Genome 47 : 1004 1014.
19. Garnatje T, Garcia S, Canela MA. 2007. Genome size variation from a phylogenetic perspective in the genus Cheirolophus Cass. (Asteraceae): biogeographic implications. Plant Systematics and Evolution 264 : 117 134.
20. Geissman TA, Irwin MA. 1974. Chemical constitution and botanical affinity in Artemisia. In : Bendz G Santesson J, eds. Chemistry in botanical classification. Proceedings of the Twenty-Fifth Nobel Symposium. New York : Academic Press, 135 143.
21. Gregory TR, Hebert PDN. 1999. The modulation of DNA content: proximate causes and ultimate consequences. Genome Research 9 : 317 324.
22. Greilhuber J. 1998. Intraspecific variation in genome size: a critical reassessment. Annals of Botany 82 : 27 35.
23. Greilhuber J. 2005. Intraspecific variation in genome size in angiosperms: identifying its existence. Annals of Botany 95 : 91 98.
24. Hall HM, Clements FE. 1923. The North American species of Artemisia, Chrysothamnus, and Atriplex. The phylogentic method in taxonomy. Washington, DC : Carnegie Institution of Washington Publication, 326.
25. Harvey SJ. 1981. Life history and reproductive strategies in Artemisia. MSc Thesis, Montana State University, Bozeman, MT.
26. Holbo HR, Mozingo HN. 1965. The chromatographic characterization of Artemisia section Tridentatae. American Journal of Botany 52 : 970 978.
27. Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 : 754 755.
28. Kellogg EA, Bennetzen JL. 2004. The evolution of nuclear genome structure in seed plants. American Journal of Botany 91 : 1709 1725.
29. Kelsey RG, Shafizadeh F. 1979. Sesquiterepene lactones and systematics of the genus Artemisia L. Phytochemistry 18 : 1591 1611.
30. Kornkven AB, Watson L, Estes J. 1998. Phylogenetic analysis of Artemisia section Tridentatae (Asteraceae) based on sequences from the internal transcribed spacers (ITS) of nuclear ribosomal DNA. American Journal of Botany 85 : 1787 1795.
31. Kornkven AB, Watson L, Estes J. 1999. A molecular phylogeny of Artemisia sect. Tridentatae (Asteraceae) based on chloroplast DNA restriction site variation. Systematic Botany 24 : 69 84.
32. Leitch IJ, Bennett MD. 2004. Genome downsizing in polyploidy plants. Biological Journal of the Linnean Society 82 : 651 663.
33. Leitch IJ, Chase MW, Bennett MD. 1998. Phylogenetic analysis of DNA C-values provides evidence for a small ancestral genome size in flowering plants. Annals of Botany 82 (Suppl. 1 85 94.
34. MacArthur RH, Wilson EO. 1967. The theory of island biogeography. Princeton, NJ : Princeton University Press.
35. Mahalovich MF, McArthur ED. 2004. Sagebrush (Artemisia spp.) seed and plant transfer guidelines. Native Plants Journ 5 : 141 147.
36. Marie D, Brown SC. 1993. A cytometric exercise in plant DNA histograms, with 2C values for 70 species. Biology of the Cell 78 : 41 51.
37. McArthur ED. 1979. Sagebrush systematics and evolution. Sagebrush ecosystem symposium. Logan, UT : Utah State University, 14 22.
38. McArthur ED. 1983. Taxonomy, origin, and distribution of big sagebrush (A. Tridentata) and allies (subgenus Tridentatae). In : Johson KL, ed. Prodeedings of the first Utah Shurb ecology workshop. Logan, UT : College of Natural Resources, Utah State University, 1 13.
39. McArthur ED. 2005. Sagebrush, common and uncommon, palatable and unpalatable. Rangelands 27 : 47 51.
40. McArthur ED, Blauer AC, Plummer AP, Stevens R. 1979. Characteristics and hybridization of important intermountain shrubs. III. Sunflower family. Research Paper INT-220. Ogden, UT : U.S. Department of Agriculture. Forest Service, Intermountain Forest and Range Experiment Station.
41. McArthur ED, Mudge J, Van Buren R, Andersen WR, Sanderson SC, Babbel DG. 1998. Randomly amplified polymorphic DNA analysis (RAPD) of Artemisia subgenus Tridentatae species and hybrids. Great Basin Naturalist 58 : 12 27.
42. McArthur ED, Plummer AP. 1978. Biogeography and management of native Western shrubs: a case study, section Tridentatae of Artemisia. Great Basin Naturalist Memoirs 2 : 229 243.
43. McArthur ED, Pope CL. 1979. Karyotypes of four Artemisia species: A. carruthii, A. filifolia, A. frigida and A. spicescens. Great Basin Naturalist Memoirs 39 : 419 426.
44. McArthur ED, Pope CL, Freeman DC. 1981. Chromosomal studies of subgenus Tridentatae of Artemisia: evidence for autopolyploidy. American Journal of Botany 68 : 589 605.
45. McArthur ED, Sanderson SC. 1999. Cytogeography and chromosome evolution of subgenus Tridentatae of Artemisia (Asteraceae). American Journal of Botany 86 : 1754 1775.
46. McArthur ED, Stevens R. 2004. Composite shrubs. In : Monsen SB, Stevens R, Shaw NL, comps. Restoring western ranges and wildlands, General Technical Report RMRS-GTR-136, vol. 2. Fort Collins, CO : U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station, 493 537.
47. McArthur ED, Welch BL, Sanderson SC. 1988. Natural and artificial hybridization between big sagebrush (A. tridentata) subspecies. Journal of Heredity 79 : 268 276.
48. Murray BG. 2005. When does intraspecific C-value variation become taxonomically significant? Annals of Botany 95 : 119 125.
49. Nickrent DL, Schuette KP, Starr EM. 1994. A molecular phylogeny of Arceuthobium (Viscaceae) based on nuclear ribosomal DNA internal transcribed spacer sequences. American Journal of Botany 81 : 1149 1160.
50. Nylander JA. 2004. MrModeltest v. 2. Programm distributed by the author. Uppsala : Evolutionary Biology Centre, Uppsala University.
51. Ohri D. 1998. Genome size variation and plant systematics. Annals of Botany 82 (Suppl. 1 75 83.
52. Pellicer J, Garcia S, Garnatje T, Hidalgo O, Korobkov AA, Dariimaa S, Vallès J. 2007a. Chromosome counts in Asian Artemisia L. (Asteraceae) species: from diploids to the first report of the highest polyploid in the genus. Botanical Journal of the Linnean Society 153 : 301 310.
53. Pellicer J, Garcia S, Garnatje T, Dariimaa S, Korobkov AA, Vallès J. 2007b. Chromosome numbers in some Artemisia (Asteraceae, Anthemideae) species and genome size variation in its subgenus Dracunculus: karyological, systematic and phylogenetic implications. Chromosome Botany 2 : 45 53.
54. Petrov DA, Sangster TA, Johnston JS, Hartl DL, Shaw KL. 2000. Evidence of DNA loss as a determinant of genome size. Science 287 : 1060 1062.
55. Plummer AP, Christensen DR, Monsen SB. 1968. Restoring big-game range in Utah. Publication 68-3. Salt Lake City, UT : Utah Division of Fish and Game.
56. Posada D, Buckley TR. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology 53 : 793 808.
57. R Project. 2005. Available at: http://CRAN.R-project.org
58. Rabinowicz PD. 2000. Are obese plant genomes on a diet? Genome Research 10 : 893 894.
59. Rydberg PA. 1916. (Carduales), Cardueae, Tageteae, Anthemideae. North American Flora 34 : 244 285.
60. Sanderson SC, McArthur ED, Stutz HC. 1989. A relationship between polyploidy and habitat in western shrub species. In : Wallace A, McArthur ED, Haferkamp MR, comps. Proceedings-Symposium on shrub ecophysiology and biotechnology. General Technical Report INT-256. Ogden, UT : US Department of Agriculture, Forest Service, Intermountain Research Station, 23 30.
61. Sanz M, Vilatersana R, Hidalgo O, Garcia-Jacas N, Susanna A, Vallès J. 2007. Molecular phylogeny of subtribe Artemisiinae, allies (Anthemideae Asteraceae) with special reference to Artemisia: evidence from nrDNA, 3′ ETS and ITS sequences. Taxon (in press).
62. Shultz LM. 1993. Artemisia, sagebrush. In : Hickman JC, ed. The Jepson manual, higher plants of California. Berkeley, CA : University of California Press, 202 205.
63. Shultz LM. 2005. Re-examination of subgeneric concepts in Artemisia, In : Ling YR, ed. International symposium on artemisia and its allies south. Guangzhou : China Institute of Botany, 36 44.
64. Shultz LM. 2006. 'Artemisia'. In : Flora of North America, Editorial Committee, eds. Flora of North America, vol. 21 : Asterales. New York : Oxford University Press, 503 534.
65. Soltis DE, Soltis PS, Bennett MD, Leitch IJ. 2003. Evolution of genome size in the angiosperms. American Journal of Botany 90 : 1596 1603.
66. Stanton DJ, McArthur ED, Freeman DC, Golengerg EM. 2002. No genetic substructuring in Artemisia subgenus Tridentatae despite strong ecotypic subspecies selection. Biochemical Systematics and Ecology 30 : 579 593.
67. Suda J, Kyncl T, Freiová R. 2003. Nuclear DNA amounts in Macaronesian Angiosperms. Annals of Botany 92 : 153 164.
68. Torrell M, Garcia-Jacas N, Susanna A, Vallès J. 1999. Phylogeny in Artemisia (Asteraceae, Anthemideae) inferred from nuclear ribosomal DNA (ITS) sequences. Taxon 48 : 721 736.
69. Torrell M, Vallès J. 2001. Genome size in 21 Artemisia L. species (Asteraceae, Anthemideae): Systematic, evolutionary and ecological implications. Genome 44 : 231 238.
70. USDA Forest Service. 1937. Range plant handbook. Washington, DC : Government Printing Office.
71. Vallès J, Torrell M, Garnatje T, Garcia-Jacas N, Vilatersana R, Susanna A. 2003. The genus Artemisia and its allies: phylogeny of the subtribe Artemisiinae (Asteraceae, Anthemideae) based on nucleotide sequences of nuclear ribosomal DNA internal transcribed spacers (ITS). Plant Biology 5 : 274 284.
72. Vinogradov AE. 2004. Genome size and extinction risk in vertebrates. Proceedings of the Royal Society B: Biological Sciences 271 : 1701 1705.
73. Ward GH. 1953. Artemisia section Seriphidium in North America: a cytotaxonomic study. Contributions from the Dudley Herbarium 4 : 155 205.
74. Watson LE, Bates PL, Evans TM, Unwin MM, Estes JR. 2002. Molecular phylogeny of subtribe Artemisiinae (Asteraceae), including Artemisia and its allied and segregate genera. BMC Evolutionary Biology 2 : 17.
75. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In : Innis M, Gelfand D, Sninsky J, White T, eds. PCR protocols: a guide to methods and applications. New York : Academic Press, 315 322.