The phylogenetic position of Neritimorpha based on the mitochondrial genome of Nerita melanotragus (Mollusca: Gastropoda)

Molecular Phylogenetics and Evolution

Volumn 57, Issue 2, 2010, Pages 918-923

  Castro, Lyda R ^a   Colgan, D J ^b  

^a UNIVERSIDAD DEL MAGDALENA   (Colombia)

^b AUSTRALIAN MUSEUM   (Australia)

Author keywords

Amino acid alignment; Gastropod phylogeny; Gene order; Mitochondrion; Nerita

Indexed keywords

TRANSFER RNA;

ANIMAL; ARTICLE; CLASSIFICATION; GASTROPOD; GENETICS; MITOCHONDRIAL GENOME; MOLECULAR EVOLUTION; PHYLOGENY;

ANIMALS; EVOLUTION, MOLECULAR; GASTROPODA; GENOME, MITOCHONDRIAL; PHYLOGENY; RNA, TRANSFER;

CAENOGASTROPODA; CEPHALOPODA; GASTROPODA; HETEROBRANCHIA; MOLLUSCA; NERITA; NERITOPSINA; OCTOPUS; OCTOPUS VULGARIS; VETIGASTROPODA;

EID: 78049401272     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2010.08.030     Document Type: Article

References (31)

1. Aktipis S.H., Giribet G., Lindberg D.R., Ponder W.F. Gastropod phylogeny: an overview and analysis. Phylogeny and Evolution of the Mollusca 2008, 199-236. University of California Press, Berkeley. W.F. Ponder, D.R. Lindberg (Eds.).
2. Bandyopadhyay P.K., Stevenson B.J., Cady M.T., Olivera B.M., Wolstenholme D.R. Complete mitochondrial DNA sequence of a conoidean gastropod, Lophiotoma (Xenuroturris) cerithiformis: gene order and gastropod phylogeny. Toxicon 2006, 48:29-43.
3. van den Biggelaar J.A.M., Haszprunar G. Cleavage patterns and mesentoblast formation in the Gastropoda: an evolutionary perspective. Evolution 1996, 50:1520-1540.
4. Castro L.R., Dowton M. The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae). Mol. Phylogenet. Evol. 2005, 34:469-479.
5. Castro L.R., Ruberu K., Dowton M. Mitochondrial genomes of Vanhornia eucnemidarum and Primeuchroeus sp.: evidence of rearranged mitochondrial genomes in the Hymenoptera. Genome 2006, 49:752-766.
6. Colgan D.J., Ponder W.F., Eggler P.E. Gastropod evolutionary rates and phylogenetic relationships assessed using partial 28S rDNA and histone H3 sequences. Zool. Scripta 2000, 29:29-63.
7. Colgan D.J., Ponder W.F., Beacham E., Macaranas J.M. Molecular phylogenetic studies of Gastropoda based on six gene segments representing coding or non-coding and mitochondrial or nuclear DNA. Moll. Res. 2003, 23:123-148.
8. Dowton M., Cameron S.L., Austin A.D., Whiting M.F. Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera - A lineage with both rapidly and slowly evolving mitochondrial genomes. Mol. Phylogenet. Evol. 2009, 52:512-519.
9. Grande C., Templado J., Zardoya R. Evolution of gastropod mitochondrial genome arrangements. BMC Evol. Biol. 2008, 8:61.
10. Harasewych M.G., McArthur A.G. A molecular phylogeny of the Patellogastropoda (Mollusca: Gastropoda). Mar. Biol. 2000, 137:183-194.
11. Haszprunar G. The Heterobranchia - a new concept of the phylogeny and evolution of the higher Gastropoda. Zeits. Zool. Syst. Evolutions 1985, 23:15-37.
12. Haszprunar G. On the origin and evolution of major gastropod groups, with special reference to the Streptoneura (Mollusca). J. Moll. Studies 1988, 54:367-441.
13. Huelsenbeck J.P., Ronquist F.R. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755.
14. Ki J.S., Lee Y.M., Jung S.O., Horiguchi T., Cho H.S., Lee J.S. Mitochondrial genome of Thais clavigera (Mollusca: Gastropoda): Affirmation of the conserved, ancestral gene pattern within the mollusks. Mol. Phylogenet. Evol. 2010, 54:1016-1020.
15. Lindberg D.R., Guralnick R.P. Phyletic patterns of early development in gastropod molluscs. Evol. Dev. 2003, 5:494-507.
16. Lowe T.M., Eddy S.R. TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucl. Acids Res. 1997, 25:955-964.
17. McArthur A.G., Harasewych M.G. Molecular systematics of the major lineages of the Gastropoda. Molecular Systematics and Phylogeography of Mollusks 2003, 140-160. Smithsonian Books, Washington. C. Lydeard, D.R. Lindberg (Eds.).
18. Maynard B.T., Kerr L.J., McKiernan J.M., Jansen E.S., Hanna P.J. Mitochondrial DNA sequence and gene organization in the Australian blacklip abalone Haliotis rubra (Leach). Mar. Biotechnol. 2005, 7:645-658.
19. Nylander J.A.A. MrModeltest v2 Program distributed by the author 2004, Evolutionary Biology Centre, Uppsala University.
20. Ponder W.F., Lindberg D.R. Towards a phylogeny of gastropod molluscs - a preliminary analysis using morphological characters. Zool. J. Linn. Soc. 1997, 19:83-265.
21. Ronquist F., Huelsenbeck J.P. MrBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
22. von Salvini-Plawen L., Steiner G. Synapomorphies and plesiomorphies in higher classification of the Mollucsa. Origin and Evolutionary Radiation of the Mollusca 1996, 29-56. Oxford University Press, Oxford. J.D. Taylor (Ed.).
23. Sasaki T. Comparative anatomy and phylogeny of the recent Archaeogastropoda. Univ. Tokyo, Bull. 1998, 38:1-224.
24. Simison W.B., Lindberg D.R., Boore J.L. Rolling circle amplification of metazoan mitochondrial genomes. Mol. Phylogenet. Evol. 2006, 39:562-567.
25. Simison W.B., Boore J. Molluscan evolutionary genomics. Phylogeny and Evolution of the Mollusca 2008, 447-461. University of California Press, Berkeley. W.F. Ponder, D.R. Lindberg (Eds.).
26. Simon D.L., Larget, B. 2004. BADGER, version 1.02b. Department of Mathematics and Computer Sciences, Duquesne University []. http://badger.duq.edu.
27. Swofford D.L. PAUP*: Phylogenetic Analysis Using Parsimony (* and other methods), Version 4b10 2001, Sinauer Associates, Sunderland, Massachusetts.
28. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. Mol. Biol. Evol. 2007, 24:1596-1599.
29. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The CLUSTAL X windows interface. Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 1997, 25:4876-4882.
30. Warén A. Gastropoda and monoplacophora from hydrothermal vents and seeps; new taxa and records. The Veliger 2001, 44:116-231.
31. Yokobori S., Fukuda N., Nakamura M., Aoyama T., Oshima T. Long-term conservation of six duplicated structural genes in cephalopod mitochondrial genomes. Mol. Biol. Evol. 2004, 21:2034-2046.