Mitochondrial genome of Thais clavigera (Mollusca: Gastropoda): Affirmation of the conserved, ancestral gene pattern within the mollusks

Molecular Phylogenetics and Evolution

Volumn 54, Issue 3, 2010, Pages 1016-1020

  Ki, Jang Seu ^a   Lee, Young Mi ^a   Jung, Sang Oun ^b   Horiguchi, Toshihiro ^c   Cho, Hyeon Seo ^d   Lee, Jae Seong ^b  

^a Sangmyung University   (South Korea)

^b National Research Laboratory of Marine Molecular and Environmental Bioscience   (South Korea)

^c NATIONAL INSTITUTE FOR ENVIRONMENTAL STUDIES   (Japan)

^d Chonnam National University   (South Korea)

Author keywords

Expressed sequence tags; Gastropod; Mitochondrial genome; Sequencing; Thais clavigera

Indexed keywords

MITOCHONDRIAL DNA; TRANSFER RNA;

ANIMAL; ARTICLE; CLASSIFICATION; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GASTROPOD; GENE ORDER; GENE REARRANGEMENT; GENETICS; MITOCHONDRIAL GENE; MITOCHONDRIAL GENOME; MOLECULAR EVOLUTION; PHYLOGENY; RNA GENE;

ANIMALS; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; EXPRESSED SEQUENCE TAGS; GASTROPODA; GENE ORDER; GENE REARRANGEMENT; GENES, MITOCHONDRIAL; GENES, RRNA; GENOME, MITOCHONDRIAL; PHYLOGENY; RNA, TRANSFER; SEQUENCE ANALYSIS, DNA;

GASTROPODA; MOLLUSCA; MURICIDAE; SORBEOCONCHA; THAIS CLAVIGERA;

EID: 76649144780     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2009.12.003     Document Type: Article

References (28)

1. Akasaki T., Nikaido M., Tsuchiya K., Segawa S., Hasegawa M., and Okada N. Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications. Mol. Phylogenet. Evol. 38 (2006) 648-658
2. Bandyopadhyay P.K., Stevenson B.J., Cady M.T., Olivera B.M., and Wolstenholme D.R. Complete mitochondrial DNA sequence of a Conoidean gastropod, Lophiotoma (Xenuroturris) cerithiformis: gene order and gastropod phylogeny. Toxicon 48 (2006) 29-43
3. Boore J.L., and Brown W.M. Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicate. Genetics 138 (1994) 423-443
4. Boore J.L., Medina M., and Rosenberg L.A. Complete sequences of the highly rearranged Molluscan mitochondrial genomes of the Scaphopod Graptacme eborea and the Bivalve Mytilus edulis. Mol. Biol. Evol. 21 (2004) 1492-1503
5. DeJong R.J., Emery A.M., and Adema C.M. The mitochondrial genome of Biomphalaria glabrata (Gastropoda: Basommatophora), intermediate host of Schistosoma mansoni. J. Parasitol. 90 (2004) 991-997
6. Dreyer H., and Steiner G. The complete sequence and gene organization of the mitochondrial genome of the gadilid scaphopod Siphonondentalium lobatum (Mollusk). Mol. Phylogenet. Evol. 31 (2004) 605-617
7. Gissi C., and Pesole G. Transcript mapping and genome annotation of ascidian mtDNA using EST data. Genome Res. 13 (2003) 2203-2212
8. Grande C., Templado J., and Zardoya R. Evolution of gastropod mitochondrial genome arrangements. BMC Evol. Biol. 8 (2008) 61
9. Grande C., Templado J., Cervera J.L., and Zardoya R. The complete mitochondrial genome of the nudibranch Roboastra europaea (Molluscsa: Gastropoda) supports the monophyly of opisthobranchs. Mol. Biol. Evol. 19 (2002) 1672-1685
10. Grande C., Templado J., Cervera J.L., and Zardoya R. Molecular phylogeny of Euthyneura (Mollusca: Gastropoda). Mol. Biol. Evol. 21 (2004) 303-313
11. Hatzoglou E., Rodakis G.C., and Lecanidou R. Complete sequence and gene organization of the mitochondrial genome of the land snail Albinaria coerulea. Genetics 140 (1995) 1353-1366
12. Horiguchi T., Cho H.-S., Shiraishi H., Shibata Y., Soma M., Morita M., and Shimizu M. Field studies on imposex and organotin accumulation in the rock shell, Thais clavigera, from the Seto Inland Sea and the Sanriku region, Japan. Sci. Total Environ. 214 (1998) 65-70
13. Jung S.-O., Lee Y.-M., Park T.-J., Park H.G., Hagiwara A., Leung K.-M.Y., Dahms H.-U., Lee W., and Lee J.-S. The complete mitochondrial genome of the intertidal copepod Tigriopus sp. (Copepoda, Harpactidae) from Korea and phylogenetic considerations. J. Exp. Mar. Biol. Ecol. 333 (2006) 251-262
14. Ki J.-S., Park H.G., and Lee J.-S. The complete mitochondrial genome of the cyclopoid copepod Paracyclopina nana: a highly divergent genome with novel gene order and atypical gene numbers. Gene 435 (2009) 13-22
15. Knudsen B., Kohn A.B., Nahir B., McFadden C.S., and Moroz L.L. Complete DNA sequence of the mitochondrial genome of the seaslug, Aplysia californica: conservation of the gene order in Euthyneura. Mol. Phylogenet. Evol. 38 (2006) 459-469
16. Kumazawa Y., Ota H., Nishida M., and Ozawa T. The complete nucleotide sequence of a snake (Dinodon semicarinatus) mitochondrial genome with two identical control regions. Genetics 150 (1998) 313-329
17. Kurabayashi A., and Ueshima R. Complete sequence of the mitochondrial DNA of the primitive opisthobranch gastropod Pupa strigosa: systematic implication of the genome organization. Mol. Biol. Evol. 17 (2000) 266-277
18. Macey J.R., Larson A., Ananjeva N.B., Fang Z., and Papenfuss T.J. Two novel gene orders and the role of light-strand replication in the rearrangement of the vertebrate mitochondrial genome. Mol. Biol. Evol. 14 (1997) 91-104
19. Maynard B.T., Kerr L.J., McKiernan J.M., Jansen E.S., and Hanna P.J. Mitochondrial DNA sequence and gene organization in Australian backup abalone Haliotis rubra (Leach). Mar. Biotechnol. 7 (2005) 645-658
20. Moore C.A., Gudikote J., and Van Tuyle G.C. Mitochondrial DNA rearrangements, including partial uplications, occur in young and old rat tissues. Mutat. Res. 421 (1998) 205-217
21. Moritz C., and Brown W.M. Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards. Proc. Natl. Acad. Sci. USA 84 (1987) 7183-7187
22. Sasuga J., Yokobori S., Kaifu M., Ueda T., Nishikawa K., and Watanabe K. Gene contents and organization of a mitochondrial DNA segment of the squid Loligo bleekeri. J. Mol. Evol. 48 (1999) 692-702
23. Simison W.B., Lindberg D.R., and Boore J.L. Rolling circle amplification of metazoan mitochondrial genomes. Mol. Phylogenet. Evol. 39 (2006) 562-567
24. Stanton D.J., Daehler L.L., Moritz C.C., and Brown W.M. Sequences with the potential to form stem-and-loop structures are associated with coding-region duplications in animal mitochondrial DNA. Genetics 137 (1994) 233-241
25. Tan K.S., and Liu L.L. Description of a new species of Thais (Mollusca: NeoGastropoda: Muricidae) from Taiwan, based on morphological and allozyme analyses. Zool. Sci. 18 (2001) 1275-1289
26. Triant D.A., and DeWoody J.A. Extensive mitochondrial DNA transfer in a rapidly evolving rodent has been mediated by independent insertion events and by duplications. Gene 401 (2007) 61-70
27. Yamazaki N., Ueshima R., Terrett J.A., Yokobori S., Kaifu M., Segawa R., Kobayashi T., Numachi K., Ueda T., Nishikawa K., Watanabe K., and Thomas R.H. Evolution of pulmonate gastropod mitochondrial genomes: comparisons of gene organizations of Euhadra, Cepaea and Albinaria and implications of unusual tRNA secondary structures. Genetics 145 (1997) 749-758
28. Yokobori S., Fukuda N., Aoyama T., Nakamura M., and Oshima T. Long-term conservation of six duplicated structural genes in cephalopod mitochondrial genomes. Mol. Biol. Evol. 21 (2004) 2034-2046