메뉴 건너뛰기




Volumn 11, Issue 6, 2010, Pages 2179-2194

Population structure and conservation genetics of the Oregon spotted frog, Rana pretiosa

Author keywords

Amphibian declines; Evolutionarily significant unit; Gene flow; Genetic diversity; Pacific Northwest; Ranidae

Indexed keywords

CONNECTIVITY; CONSERVATION GENETICS; DATA SET; EFFECTIVE POPULATION SIZE; ENDANGERED SPECIES; EXTINCTION; FROG; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC STRUCTURE; HABITAT TYPE; ISOLATED POPULATION; MIGRATION; MITOCHONDRIAL DNA; POPULATION STRUCTURE; PRAIRIE; RANGE EXPANSION;

EID: 78049356375     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-010-0104-x     Document Type: Article
Times cited : (28)

References (59)
  • 2
    • 58149457205 scopus 로고    scopus 로고
    • Microsatellite analysis of the natterjack toad (Bufo calamita) in Denmark: populations are islands in a fragmented landscape
    • Allentoft M, Siegismund H, Briggs L, Andersen L (2009) Microsatellite analysis of the natterjack toad (Bufo calamita) in Denmark: populations are islands in a fragmented landscape. Conserv Genet 10: 15-28.
    • (2009) Conserv Genet , vol.10 , pp. 15-28
    • Allentoft, M.1    Siegismund, H.2    Briggs, L.3    Andersen, L.4
  • 3
    • 2942700447 scopus 로고    scopus 로고
    • Habitat fragmentation causes bottlenecks and inbreeding in the European tree frog (Hyla arborea)
    • Andersen L, Fog K, Damgaard C (2004) Habitat fragmentation causes bottlenecks and inbreeding in the European tree frog (Hyla arborea). Proc Biol Sci 271: 1293-1302.
    • (2004) Proc Biol Sci , vol.271 , pp. 1293-1302
    • Andersen, L.1    Fog, K.2    Damgaard, C.3
  • 4
    • 35148831188 scopus 로고    scopus 로고
    • Genetic effects of captive breeding cause a rapid, cumulative fitness decline in the wild
    • Araki H, Cooper B, Blouin MS (2007) Genetic effects of captive breeding cause a rapid, cumulative fitness decline in the wild. Science 318: 100-103.
    • (2007) Science , vol.318 , pp. 100-103
    • Araki, H.1    Cooper, B.2    Blouin, M.S.3
  • 5
    • 70349290642 scopus 로고    scopus 로고
    • Carry-over effect of captive breeding reduces reproductive fitness of wild-born descendents in the wild
    • Araki H, Cooper B, Blouin MS (2009) Carry-over effect of captive breeding reduces reproductive fitness of wild-born descendents in the wild. Biol Lett 5: 621-624.
    • (2009) Biol Lett , vol.5 , pp. 621-624
    • Araki, H.1    Cooper, B.2    Blouin, M.S.3
  • 6
    • 35848940298 scopus 로고    scopus 로고
    • Genetic population differentiation and connectivity among fragmented Moor frog (Rana arvalis) populations in The Netherlands
    • Arens P, van der Sluis T, van't Westende W, Vosman B, Vos C, Smulders M (2007) Genetic population differentiation and connectivity among fragmented Moor frog (Rana arvalis) populations in The Netherlands. Landsc Ecol 22: 1489-1500.
    • (2007) Landsc Ecol , vol.22 , pp. 1489-1500
    • Arens, P.1    van der Sluis, T.2    van't westende, W.3    Vosman, B.4    Vos, C.5    Smulders, M.6
  • 7
    • 0035836728 scopus 로고    scopus 로고
    • Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach
    • Beerli P, Felsenstein J (2001) Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc Natl Acad Sci USA 98: 4563-4568.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 4563-4568
    • Beerli, P.1    Felsenstein, J.2
  • 8
    • 1042267118 scopus 로고    scopus 로고
    • Contrasting population structures in two sympatric anurans: implications for species conservation
    • Brede E, Beebee T (2004) Contrasting population structures in two sympatric anurans: implications for species conservation. Heredity 92: 110-117.
    • (2004) Heredity , vol.92 , pp. 110-117
    • Brede, E.1    Beebee, T.2
  • 9
    • 58149384243 scopus 로고    scopus 로고
    • Demography and movement in a relocated population of Oregon spotted frogs (Rana pretiosa): influence of season and gender
    • Chelgren ND, Pearl CA, Adams MJ, Bowerman J (2008) Demography and movement in a relocated population of Oregon spotted frogs (Rana pretiosa): influence of season and gender. Copeia 2008: 742-751.
    • (2008) Copeia , vol.2008 , pp. 742-751
    • Chelgren, N.D.1    Pearl, C.A.2    Adams, M.J.3    Bowerman, J.4
  • 12
    • 65649090493 scopus 로고    scopus 로고
    • The effect of habitat fragmentation on fine scale population structure of wood frogs (Rana sylvatica)
    • Crosby M, Licht L, Fu J (2008) The effect of habitat fragmentation on fine scale population structure of wood frogs (Rana sylvatica). Conserv Genet 10: 1707-1718.
    • (2008) Conserv Genet , vol.10 , pp. 1707-1718
    • Crosby, M.1    Licht, L.2    Fu, J.3
  • 14
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software structure: a simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software structure: a simulation study. Mol Ecol 14: 2611-2620.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 15
    • 0000343551 scopus 로고    scopus 로고
    • Policy regarding the recognition of distinct vertebrate population segments under the Endangered Species Act
    • Federal Register
    • Federal Register (1996) Policy regarding the recognition of distinct vertebrate population segments under the Endangered Species Act. Fed Regist 61: 4722-4725.
    • (1996) Fed Regist , vol.61 , pp. 4722-4725
  • 16
    • 34247334142 scopus 로고    scopus 로고
    • Genetic diversity, but not hatching success, is jointly affected by postglacial colonization and isolation in the threatened frog, Rana latastei
    • Ficetola GF, Garner TWJ, De Bernardi F (2007) Genetic diversity, but not hatching success, is jointly affected by postglacial colonization and isolation in the threatened frog, Rana latastei. Mol Ecol 16: 1787-1797.
    • (2007) Mol Ecol , vol.16 , pp. 1787-1797
    • Ficetola, G.F.1    Garner, T.W.J.2    de Bernardi, F.3
  • 17
    • 13444291748 scopus 로고    scopus 로고
    • Population structure of Columbia spotted frogs (Rana luteiventris) is strongly affected by the landscape
    • Funk WC, Blouin MS, Corn PS, Maxell BA, Pilliod DS, Amish S, Allendorf FW (2005) Population structure of Columbia spotted frogs (Rana luteiventris) is strongly affected by the landscape. Mol Ecol 14: 483-496.
    • (2005) Mol Ecol , vol.14 , pp. 483-496
    • Funk, W.C.1    Blouin, M.S.2    Corn, P.S.3    Maxell, B.A.4    Pilliod, D.S.5    Amish, S.6    Allendorf, F.W.7
  • 18
    • 52049100111 scopus 로고    scopus 로고
    • Range-wide phylogeographic analysis of the spotted frog complex (Rana luteiventris and Rana pretiosa) in northwestern North America
    • Funk WC, Pearl CA, Draheim HM, Adams MJ, Mullins TD, Haig SM (2008) Range-wide phylogeographic analysis of the spotted frog complex (Rana luteiventris and Rana pretiosa) in northwestern North America. Mol Phylogenet Evol 49: 198-210.
    • (2008) Mol Phylogenet Evol , vol.49 , pp. 198-210
    • Funk, W.C.1    Pearl, C.A.2    Draheim, H.M.3    Adams, M.J.4    Mullins, T.D.5    Haig, S.M.6
  • 19
    • 0141649239 scopus 로고    scopus 로고
    • Genetic depletion in Swiss populations of Rana latastei: conservation implications
    • Garner TWJ, Angelone S, Pearman PB (2003) Genetic depletion in Swiss populations of Rana latastei: conservation implications. Biol Conserv 114: 371-376.
    • (2003) Biol Conserv , vol.114 , pp. 371-376
    • Garner, T.W.J.1    Angelone, S.2    Pearman, P.B.3
  • 20
    • 1942453433 scopus 로고    scopus 로고
    • Genetic diversity across a vertebrate species' range: a test of the central-peripheral hypothesis
    • Garner TWJ, Pearman PB, Angelone S (2004) Genetic diversity across a vertebrate species' range: a test of the central-peripheral hypothesis. Mol Ecol 13: 1047-1053.
    • (2004) Mol Ecol , vol.13 , pp. 1047-1053
    • Garner, T.W.J.1    Pearman, P.B.2    Angelone, S.3
  • 22
    • 0030939720 scopus 로고    scopus 로고
    • Cryptic species of spotted frogs, Rana pretiosa complex, in western North America
    • Green DM, Kaiser H, Sharbel TF, Kearsley J, McAllister KR (1997) Cryptic species of spotted frogs, Rana pretiosa complex, in western North America. Copeia 1997: 1-8.
    • (1997) Copeia , vol.1997 , pp. 1-8
    • Green, D.M.1    Kaiser, H.2    Sharbel, T.F.3    Kearsley, J.4    McAllister, K.R.5
  • 24
    • 24644446846 scopus 로고    scopus 로고
    • A standardized genetic differentiation measure
    • Hedrick P (2005) A standardized genetic differentiation measure. Evolution 59: 1633-1638.
    • (2005) Evolution , vol.59 , pp. 1633-1638
    • Hedrick, P.1
  • 25
    • 11144319958 scopus 로고    scopus 로고
    • Phylogeny of the new world true frogs (Rana)
    • Hillis DM, Wilcox TP (2005) Phylogeny of the new world true frogs (Rana). Mol Phylogenet Evol 34: 299-314.
    • (2005) Mol Phylogenet Evol , vol.34 , pp. 299-314
    • Hillis, D.M.1    Wilcox, T.P.2
  • 26
    • 0942278757 scopus 로고    scopus 로고
    • Historical data refute recent range contraction as cause of low genetic diversity in isolated frog populations
    • Hoffman E, Blouin MS (2004) Historical data refute recent range contraction as cause of low genetic diversity in isolated frog populations. Mol Ecol 13: 271-276.
    • (2004) Mol Ecol , vol.13 , pp. 271-276
    • Hoffman, E.1    Blouin, M.S.2
  • 27
    • 0033427602 scopus 로고    scopus 로고
    • Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability
    • Hutchison D, Templeton A (1999) Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution 53: 1898-1914.
    • (1999) Evolution , vol.53 , pp. 1898-1914
    • Hutchison, D.1    Templeton, A.2
  • 28
    • 0001358930 scopus 로고
    • The stepping stone model of population structure and the decrease of genetic correlation with distance
    • Kimura M, Weiss GH (1964) The stepping stone model of population structure and the decrease of genetic correlation with distance. Genetics 49: 561-576.
    • (1964) Genetics , vol.49 , pp. 561-576
    • Kimura, M.1    Weiss, G.H.2
  • 29
    • 0037983598 scopus 로고    scopus 로고
    • Populations 1.2.30: a population genetic software
    • CNRS UPR9034
    • Langella O (1999) Populations 1. 2. 30: a population genetic software. CNRS UPR9034. http://www. pge. cnrs-gif. fr/bioinfo/populations/index. php.
    • (1999)
    • Langella, O.1
  • 30
    • 12444282754 scopus 로고    scopus 로고
    • Environmental and population dependency of genetic variability-fitness correlations in Rana temporaria
    • Lesbarrères D, Primmer CR, Laurila A, Merila J (2005) Environmental and population dependency of genetic variability-fitness correlations in Rana temporaria. Mol Ecol 14: 311-323.
    • (2005) Mol Ecol , vol.14 , pp. 311-323
    • Lesbarrères, D.1    Primmer, C.R.2    Laurila, A.3    Merila, J.4
  • 31
    • 31544444957 scopus 로고    scopus 로고
    • The impact of historical and recent factors on genetic variability in a mountain frog: the case of Rana iberica (Anura: Ranidae)
    • Martínez-Solano I, Rey I, García-París M (2005) The impact of historical and recent factors on genetic variability in a mountain frog: the case of Rana iberica (Anura: Ranidae). Anim Conserv 8: 431-441.
    • (2005) Anim Conserv , vol.8 , pp. 431-441
    • Martínez-Solano, I.1    Rey, I.2    García-París, M.3
  • 32
    • 0002601893 scopus 로고
    • Spotted frog (Rana pretiosa) surveys in the Puget Trough of Washington, 1989-1991
    • McAllister KR, Leonard WP, Storm RM (1993) Spotted frog (Rana pretiosa) surveys in the Puget Trough of Washington, 1989-1991. Northwest Nat 74: 10-15.
    • (1993) Northwest Nat , vol.74 , pp. 10-15
    • McAllister, K.R.1    Leonard, W.P.2    Storm, R.M.3
  • 33
    • 70350247658 scopus 로고    scopus 로고
    • Impact of naturally spawning captive-bred Atlantic salmon on wild populations: depressed recruitment and increased risk of climate-mediated extinction
    • MciGinnity P, Jennings E, DeEyto E, Allott N, Samuelsson P, Rogan G, Whelan K, Cross T (2009) Impact of naturally spawning captive-bred Atlantic salmon on wild populations: depressed recruitment and increased risk of climate-mediated extinction. Proc R Soc B 27: 3601-3610.
    • (2009) Proc R Soc B , vol.27 , pp. 3601-3610
    • McIginnity, P.1    Jennings, E.2    Deeyto, E.3    Allott, N.4    Samuelsson, P.5    Rogan, G.6    Whelan, K.7    Cross, T.8
  • 34
    • 0345530943 scopus 로고    scopus 로고
    • Genetic structure in a montane ranid frog: restricted gene flow and nuclear-mitochondrial discordance
    • Monsen KJ, Blouin MS (2003) Genetic structure in a montane ranid frog: restricted gene flow and nuclear-mitochondrial discordance. Mol Ecol 12: 3275-3286.
    • (2003) Mol Ecol , vol.12 , pp. 3275-3286
    • Monsen, K.J.1    Blouin, M.S.2
  • 35
    • 23944517719 scopus 로고    scopus 로고
    • Extreme isolation by distance in a montane ranid frog Rana cascadae
    • Monsen KJ, Blouin MS (2004) Extreme isolation by distance in a montane ranid frog Rana cascadae. Conserv Genet 5: 827-835.
    • (2004) Conserv Genet , vol.5 , pp. 827-835
    • Monsen, K.J.1    Blouin, M.S.2
  • 36
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 38
    • 0034999782 scopus 로고    scopus 로고
    • Microsatellite variation and fine-scale population structure in the wood frog (Rana sylvatica)
    • Newman RA, Squire T (2001) Microsatellite variation and fine-scale population structure in the wood frog (Rana sylvatica). Mol Ecol 10: 1087-1100.
    • (2001) Mol Ecol , vol.10 , pp. 1087-1100
    • Newman, R.A.1    Squire, T.2
  • 39
    • 0024595101 scopus 로고
    • Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms
    • Orita M, Iwahana H, Kanazawa H, Hayashi K, Sekiya T (1989) Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms. Proc Natl Acad Sci USA 86: 2766-2770.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 2766-2770
    • Orita, M.1    Iwahana, H.2    Kanazawa, H.3    Hayashi, K.4    Sekiya, T.5
  • 41
    • 4344617877 scopus 로고    scopus 로고
    • Microsatellite marker data suggest sex-biased dispersal in the common frog Rana temporaria
    • Palo JU, Schmeller DS, Laurila A, Primmer CR, Kuzmin SL, Merila J (2004b) Microsatellite marker data suggest sex-biased dispersal in the common frog Rana temporaria. Mol Ecol 13: 2865-2869.
    • (2004) Mol Ecol , vol.13 , pp. 2865-2869
    • Palo, J.U.1    Schmeller, D.S.2    Laurila, A.3    Primmer, C.R.4    Kuzmin, S.L.5    Merila, J.6
  • 42
    • 33644871292 scopus 로고    scopus 로고
    • GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
    • Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
    • (2006) Mol Ecol Notes , vol.6 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 45
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.1    Stephens, M.2    Donnelly, P.3
  • 46
    • 0000262278 scopus 로고
    • GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism
    • Raymond M, Rousset F (1995) GENEPOP (version 1. 2): population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
    • (1995) J Hered , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 47
    • 0037329527 scopus 로고    scopus 로고
    • The correlation between population fitness and genetic diversity
    • Reed DH, Frankham R (2003) The correlation between population fitness and genetic diversity. Conserv Biol 17: 230-237.
    • (2003) Conserv Biol , vol.17 , pp. 230-237
    • Reed, D.H.1    Frankham, R.2
  • 48
    • 0021876634 scopus 로고
    • The complete nucleotide sequence of the Xenopus laevis mitochondrial genome
    • Roe BA, Ma DP, Wilson RK, Wong JF (1985) The complete nucleotide sequence of the Xenopus laevis mitochondrial genome. J Biol Chem 260: 9759-9774.
    • (1985) J Biol Chem , vol.260 , pp. 9759-9774
    • Roe, B.A.1    Ma, D.P.2    Wilson, R.K.3    Wong, J.F.4
  • 49
    • 0002319073 scopus 로고    scopus 로고
    • Microsatellite heterozygosity, fitness and demography in natterjack toads Bufo calamita
    • Rowe G, Beebee TJC, Burke T (1999) Microsatellite heterozygosity, fitness and demography in natterjack toads Bufo calamita. Anim Conserv 2: 85-92.
    • (1999) Anim Conserv , vol.2 , pp. 85-92
    • Rowe, G.1    Beebee, T.J.C.2    Burke, T.3
  • 51
    • 0032930187 scopus 로고    scopus 로고
    • Genetic structure of island populations of the anurans Rana temporaria and Bufo bufo
    • Seppa P, Laurila A (1999) Genetic structure of island populations of the anurans Rana temporaria and Bufo bufo. Heredity 82: 309-317.
    • (1999) Heredity , vol.82 , pp. 309-317
    • Seppa, P.1    Laurila, A.2
  • 52
    • 0026278083 scopus 로고
    • Genetic variation in relation to demography of peripheral pool frog populations (Rana lessonae)
    • Sjögren P (1991) Genetic variation in relation to demography of peripheral pool frog populations (Rana lessonae). Evol Ecol 5: 248-271.
    • (1991) Evol Ecol , vol.5 , pp. 248-271
    • Sjögren, P.1
  • 53
    • 0000062913 scopus 로고
    • A comparison of three indirect methods for estimating average levels of gene flow
    • Slatkin M, Barton NH (1989) A comparison of three indirect methods for estimating average levels of gene flow. Evolution 43: 1349-1368.
    • (1989) Evolution , vol.43 , pp. 1349-1368
    • Slatkin, M.1    Barton, N.H.2
  • 54
    • 0033137053 scopus 로고    scopus 로고
    • Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure
    • Smouse PE, Peakall R (1999) Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity 82: 561-573.
    • (1999) Heredity , vol.82 , pp. 561-573
    • Smouse, P.E.1    Peakall, R.2
  • 55
    • 21244477543 scopus 로고    scopus 로고
    • Landscape genetics of the blotched tiger salamander (Ambystoma tigrinum melanostictum)
    • Spear S, Peterson CR, Matocq MD, Storfer A (2005) Landscape genetics of the blotched tiger salamander (Ambystoma tigrinum melanostictum). Mol Ecol 14: 2553-2564.
    • (2005) Mol Ecol , vol.14 , pp. 2553-2564
    • Spear, S.1    Peterson, C.R.2    Matocq, M.D.3    Storfer, A.4
  • 57
    • 78049384087 scopus 로고    scopus 로고
    • U. S. Fish and Wildlife Service, Western Washington Fish and Wildlife Office, Lacey, Washington
    • U. S. Fish and Wildlife Service (2005) Species assessment and listing priority assessment form. Western Washington Fish and Wildlife Office, Lacey, Washington. http://ecos. fws. gov/docs/candforms_pdf/r1/D02A_V01. pdf.
    • (2005) Species assessment and listing priority assessment form
  • 58
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir B, Cockerham C (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.1    Cockerham, C.2
  • 59
    • 0037350332 scopus 로고    scopus 로고
    • Population genetics of a successful invader: the marsh frog Rana ridibunda in Britain
    • Zeisset I, Beebee TJC (2003) Population genetics of a successful invader: the marsh frog Rana ridibunda in Britain. Mol Ecol 12: 639-646.
    • (2003) Mol Ecol , vol.12 , pp. 639-646
    • Zeisset, I.1    Beebee, T.J.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.