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Volumn 5, Issue 9, 2010, Pages 1-9

Single nucleotide polymorphisms in the wnt and bmp pathways and colorectal cancer risk in a spanish cohort

Author keywords

[No Author keywords available]

Indexed keywords

BONE MORPHOGENETIC PROTEIN; WNT PROTEIN;

EID: 77958531223     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0012673     Document Type: Article
Times cited : (24)

References (47)
  • 1
    • 77958592299 scopus 로고    scopus 로고
    • GLOBOCAN 2002: Cancer Incidence, Mortality and Prevalence Worldwide IARC Cancer Base No. 5. version 2.0
    • Ferlay J, Bray F, Pisani P, Parkin DM (2004) GLOBOCAN 2002: Cancer Incidence, Mortality and Prevalence Worldwide IARC Cancer Base No. 5. version 2.0.
    • (2004)
    • Ferlay, J.1    Bray, F.2    Pisani, P.3    Parkin, D.M.4
  • 2
    • 0034644185 scopus 로고    scopus 로고
    • Environmental and heritable factors in the causation of cancer-analyses of cohorts of twins from Sweden, Denmark, and Finland
    • Lichtenstein P, Holm NV, Verkasalo PK, Iliadou A, Kaprio J, et al. (2000) Environmental and heritable factors in the causation of cancer-analyses of cohorts of twins from Sweden, Denmark, and Finland. N Engl J Med 343: 78-85.
    • (2000) N Engl J Med , vol.343 , pp. 78-85
    • Lichtenstein, P.1    Holm, N.V.2    Verkasalo, P.K.3    Iliadou, A.4    Kaprio, J.5
  • 3
    • 4944240144 scopus 로고    scopus 로고
    • Genetic predisposition to colorectal cancer
    • de la Chapelle A (2004) Genetic predisposition to colorectal cancer. Nat Rev Cancer 4: 769-780.
    • (2004) Nat Rev Cancer , vol.4 , pp. 769-780
    • de la Chapelle, A.1
  • 4
    • 67651089736 scopus 로고    scopus 로고
    • Concepts in familial colorectal cancer: Where do we stand and what is the future?
    • Castells A, Castellví-Bel S, Balaguer F (2009) Concepts in familial colorectal cancer: where do we stand and what is the future? Gastroenterology 137: 404-409.
    • (2009) Gastroenterology , vol.137 , pp. 404-409
    • Castells, A.1    Castellví-Bel, S.2    Balaguer, F.3
  • 5
    • 4444272418 scopus 로고    scopus 로고
    • The search for low-penetrance cancer susceptibility alleles
    • Houlston RS, Peto J (2004) The search for low-penetrance cancer susceptibility alleles. Oncogene 23: 6471-6476.
    • (2004) Oncogene , vol.23 , pp. 6471-6476
    • Houlston, R.S.1    Peto, J.2
  • 6
    • 33745779226 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms of the APC gene and colorectal cancer risk: A case-control study in Taiwan
    • Chen SP, Tsai ST, Jao SW, Huang YL, Chao YC, et al. (2006) Single nucleotide polymorphisms of the APC gene and colorectal cancer risk: a case-control study in Taiwan. BMC Cancer 6: 83.
    • (2006) BMC Cancer , vol.6 , pp. 83
    • Chen, S.P.1    Tsai, S.T.2    Jao, S.W.3    Huang, Y.L.4    Chao, Y.C.5
  • 7
    • 34248585737 scopus 로고    scopus 로고
    • Sporadic colorectal cancer and individual susceptibility: A review of the association studies investigating the role of DNA repair genetic polymorphisms
    • Naccarati A, Pardini B, Hemminki K, Vodicka P (2007) Sporadic colorectal cancer and individual susceptibility: a review of the association studies investigating the role of DNA repair genetic polymorphisms. Mutat Res 635: 118-145.
    • (2007) Mutat Res , vol.635 , pp. 118-145
    • Naccarati, A.1    Pardini, B.2    Hemminki, K.3    Vodicka, P.4
  • 8
    • 56749176944 scopus 로고    scopus 로고
    • Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer
    • Houlston RS, Webb E, Broderick P, Pittman AM, Di Bernardo MC, et al. (2008) Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer. Nat Genet 40: 1426-1435.
    • (2008) Nat Genet , vol.40 , pp. 1426-1435
    • Houlston, R.S.1    Webb, E.2    Broderick, P.3    Pittman, A.M.4    Di Bernardo, M.C.5
  • 9
    • 34547498546 scopus 로고    scopus 로고
    • A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21
    • Tomlinson I, Webb E, Carvajal-Carmona L, Broderick P, Kemp Z, et al. (2007) A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21. Nat Genet 39: 984-988.
    • (2007) Nat Genet , vol.39 , pp. 984-988
    • Tomlinson, I.1    Webb, E.2    Carvajal-Carmona, L.3    Broderick, P.4    Kemp, Z.5
  • 10
    • 34547092701 scopus 로고    scopus 로고
    • Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24
    • Zanke BW, Greenwood CM, Rangrej J, Kustra R, Tenesa A, et al. (2007) Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24. Nat Genet 39: 989-994.
    • (2007) Nat Genet , vol.39 , pp. 989-994
    • Zanke, B.W.1    Greenwood, C.M.2    Rangrej, J.3    Kustra, R.4    Tenesa, A.5
  • 11
    • 35648937584 scopus 로고    scopus 로고
    • A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk
    • Broderick P, Carvajal-Carmona L, Pittman AM, Webb E, Howarth K, et al. (2007) A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk. Nat Genet 39: 1315-1317.
    • (2007) Nat Genet , vol.39 , pp. 1315-1317
    • Broderick, P.1    Carvajal-Carmona, L.2    Pittman, A.M.3    Webb, E.4    Howarth, K.5
  • 12
    • 37549072226 scopus 로고    scopus 로고
    • Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk
    • Jaeger E, Webb E, Howarth K, Carvajal-Carmona L, Rowan A, et al. (2008) Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk. Nat Genet 40: 26-28.
    • (2008) Nat Genet , vol.40 , pp. 26-28
    • Jaeger, E.1    Webb, E.2    Howarth, K.3    Carvajal-Carmona, L.4    Rowan, A.5
  • 13
    • 42649136554 scopus 로고    scopus 로고
    • A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3
    • Tomlinson IP, Webb E, Carvajal-Carmona L, Broderick P, Howarth K, et al. (2008) A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3. Nat Genet 40(5): 623-630.
    • (2008) Nat Genet , vol.40 , Issue.5 , pp. 623-630
    • Tomlinson, I.P.1    Webb, E.2    Carvajal-Carmona, L.3    Broderick, P.4    Howarth, K.5
  • 14
    • 42649124305 scopus 로고    scopus 로고
    • Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21
    • Tenesa A, Farrington SM, Prendergast JG, Porteous ME, Walker M, et al. (2008) Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21. Nat Genet 40(5): 631-637.
    • (2008) Nat Genet , vol.40 , Issue.5 , pp. 631-637
    • Tenesa, A.1    Farrington, S.M.2    Prendergast, J.G.3    Porteous, M.E.4    Walker, M.5
  • 15
    • 73949096691 scopus 로고    scopus 로고
    • General lessons from large-scale studies to identify human cancer predisposition genes
    • Cazier JB, Tomlinson I (2010) General lessons from large-scale studies to identify human cancer predisposition genes. J Pathol 220(2): 255-262.
    • (2010) J Pathol , vol.220 , Issue.2 , pp. 255-262
    • Cazier, J.B.1    Tomlinson, I.2
  • 16
    • 33845373278 scopus 로고    scopus 로고
    • Colorectal cancer and genetic alterations in the Wnt pathway
    • Segditsas S, Tomlinson I (2006) Colorectal cancer and genetic alterations in the Wnt pathway. Oncogene 25: 7531-7537.
    • (2006) Oncogene , vol.25 , pp. 7531-7537
    • Segditsas, S.1    Tomlinson, I.2
  • 17
    • 4444288024 scopus 로고    scopus 로고
    • Interactions between BMP and Wnt signaling pathways in mammalian cancers
    • Huang HC, Klein PS (2004) Interactions between BMP and Wnt signaling pathways in mammalian cancers. Cancer Biol Ther 3: 676-678.
    • (2004) Cancer Biol Ther , vol.3 , pp. 676-678
    • Huang, H.C.1    Klein, P.S.2
  • 19
    • 0034724186 scopus 로고    scopus 로고
    • APC mutations in sporadic colorectal tumors: A mutational ''hotspot'' and interdependence of the ''two hits''
    • Rowan AJ, Lamlum H, Ilyas M, Wheeler J, Straub J, et al. (2000) APC mutations in sporadic colorectal tumors: A mutational ''hotspot'' and interdependence of the ''two hits''. Proc Natl Acad Sci U S A 97: 3352-3357.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 3352-3357
    • Rowan, A.J.1    Lamlum, H.2    Ilyas, M.3    Wheeler, J.4    Straub, J.5
  • 20
    • 67349145240 scopus 로고    scopus 로고
    • Overexpression of bone morphogenetic protein 4 enhances the invasiveness of Smad4-deficient human colorectal cancer cells
    • Deng H, Ravikumar TS, Yang WL (2009) Overexpression of bone morphogenetic protein 4 enhances the invasiveness of Smad4-deficient human colorectal cancer cells. Cancer Lett 281: 220-231.
    • (2009) Cancer Lett , vol.281 , pp. 220-231
    • Deng, H.1    Ravikumar, T.S.2    Yang, W.L.3
  • 21
    • 33847017335 scopus 로고    scopus 로고
    • Bone morphogenetic protein-4 is overexpressed in colonic adenocarcinomas and promotes migration and invasion of HCT116 cells
    • Deng H, Makizumi R, Ravikumar TS, Dong H, Yang W, et al. (2007) Bone morphogenetic protein-4 is overexpressed in colonic adenocarcinomas and promotes migration and invasion of HCT116 cells. Exp Cell Res 313: 1033-1044.
    • (2007) Exp Cell Res , vol.313 , pp. 1033-1044
    • Deng, H.1    Makizumi, R.2    Ravikumar, T.S.3    Dong, H.4    Yang, W.5
  • 22
    • 67649496924 scopus 로고    scopus 로고
    • Genetics of the hamartomatous polyposis syndromes: A molecular review
    • Chen HM, Fang JY (2009) Genetics of the hamartomatous polyposis syndromes: a molecular review. Int J Colorectal Dis 24(8): 865-874.
    • (2009) Int J Colorectal Dis , vol.24 , Issue.8 , pp. 865-874
    • Chen, H.M.1    Fang, J.Y.2
  • 23
    • 38949214008 scopus 로고    scopus 로고
    • Association between genetic polymorphisms of the base excision repair gene MUTYH and increased colorectal cancer risk in a Japanese population
    • Tao H, Shinmura K, Suzuki M, Kono S, Mibu R, et al. (2008) Association between genetic polymorphisms of the base excision repair gene MUTYH and increased colorectal cancer risk in a Japanese population. Cancer Sci 99: 355-360.
    • (2008) Cancer Sci , vol.99 , pp. 355-360
    • Tao, H.1    Shinmura, K.2    Suzuki, M.3    Kono, S.4    Mibu, R.5
  • 24
    • 34250876250 scopus 로고    scopus 로고
    • Genetic investigation of DNA-repair pathway genes PMS2, MLH1, MSH2, MSH6, MUTYH, OGG1 and MTH1 in sporadic colon cancer
    • Schafmayer C, Buch S, Egberts JH, Franke A, Brosch M, et al. (2007) Genetic investigation of DNA-repair pathway genes PMS2, MLH1, MSH2, MSH6, MUTYH, OGG1 and MTH1 in sporadic colon cancer. Int J Cancer 121: 555-558.
    • (2007) Int J Cancer , vol.121 , pp. 555-558
    • Schafmayer, C.1    Buch, S.2    Egberts, J.H.3    Franke, A.4    Brosch, M.5
  • 25
    • 68149180901 scopus 로고    scopus 로고
    • The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer
    • Pomerantz MM, Ahmadiyeh N, Jia L, Herman P, Verzi MP, et al. (2009) The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer. Nat Genet 41: 882-884.
    • (2009) Nat Genet , vol.41 , pp. 882-884
    • Pomerantz, M.M.1    Ahmadiyeh, N.2    Jia, L.3    Herman, P.4    Verzi, M.P.5
  • 26
    • 68149170044 scopus 로고    scopus 로고
    • The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling
    • Tuupanen S, Turunen M, Lehtonen R, Hallikas O, Vanharanta S, et al. (2009) The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling. Nat Genet 41: 885-890.
    • (2009) Nat Genet , vol.41 , pp. 885-890
    • Tuupanen, S.1    Turunen, M.2    Lehtonen, R.3    Hallikas, O.4    Vanharanta, S.5
  • 27
    • 77949487616 scopus 로고    scopus 로고
    • Common variants in human CRC genes as low-risk alleles
    • Picelli S, Zajac P, Zhou XL, Edler D, Lenander C, et al. (2010) Common variants in human CRC genes as low-risk alleles. Eur J Cancer 46(6): 1041-1048.
    • (2010) Eur J Cancer , vol.46 , Issue.6 , pp. 1041-1048
    • Picelli, S.1    Zajac, P.2    Zhou, X.L.3    Edler, D.4    Lenander, C.5
  • 28
    • 0035116904 scopus 로고    scopus 로고
    • A molecular variant of the APC gene at codon 1822: Its association with diet, lifestyle, and risk of colon cancer
    • Slattery ML, Samowitz W, Ballard L, Schaffer D, Leppert M, et al. (2001) A molecular variant of the APC gene at codon 1822: its association with diet, lifestyle, and risk of colon cancer. Cancer Res 61: 1000-1004.
    • (2001) Cancer Res , vol.61 , pp. 1000-1004
    • Slattery, M.L.1    Samowitz, W.2    Ballard, L.3    Schaffer, D.4    Leppert, M.5
  • 29
    • 74249093205 scopus 로고    scopus 로고
    • Association of selected polymorphisms of CCND1, p21, and caspase8 with colorectal cancer risk
    • Liu B, Zhang Y, Jin M, Ni Q, Liang X, et al. (2010) Association of selected polymorphisms of CCND1, p21, and caspase8 with colorectal cancer risk. Mol Carcinog 49: 75-84.
    • (2010) Mol Carcinog , vol.49 , pp. 75-84
    • Liu, B.1    Zhang, Y.2    Jin, M.3    Ni, Q.4    Liang, X.5
  • 31
    • 0035487312 scopus 로고    scopus 로고
    • The Asp1822Val variant of the APC gene is a common polymorphism without clinical implications
    • Ruiz-Ponte C, Vega A, Conde R, Barros F, Carracedo A (2001) The Asp1822Val variant of the APC gene is a common polymorphism without clinical implications. J Med Genet 38: E33.
    • (2001) J Med Genet , vol.38
    • Ruiz-Ponte, C.1    Vega, A.2    Conde, R.3    Barros, F.4    Carracedo, A.5
  • 33
    • 20244386395 scopus 로고    scopus 로고
    • Accuracy of revised Bethesda guidelines, microsatellite instability, and immunohistochemistry for the identification of patients with hereditary nonpolyposis colorectal cancer
    • Pinol V, Castells A, Andreu M, Castellvi-Bel S, Alenda C, et al. (2005) Accuracy of revised Bethesda guidelines, microsatellite instability, and immunohistochemistry for the identification of patients with hereditary nonpolyposis colorectal cancer. JAMA 293: 1986-1994.
    • (2005) JAMA , vol.293 , pp. 1986-1994
    • Pinol, V.1    Castells, A.2    Andreu, M.3    Castellvi-Bel, S.4    Alenda, C.5
  • 34
    • 4444381291 scopus 로고    scopus 로고
    • Suppression of tumorigenesis and activation of Wnt signaling by bone morphogenetic protein 4 in human cancer cells
    • Nishanian TG, Kim JS, Foxworth A, Waldman T (2004) Suppression of tumorigenesis and activation of Wnt signaling by bone morphogenetic protein 4 in human cancer cells. Cancer Biol Ther 3: 667-675.
    • (2004) Cancer Biol Ther , vol.3 , pp. 667-675
    • Nishanian, T.G.1    Kim, J.S.2    Foxworth, A.3    Waldman, T.4
  • 35
    • 77958569462 scopus 로고    scopus 로고
    • The Cancer Genome Anatomy Project webpage
    • The Cancer Genome Anatomy Project webpage (2006) http://cgap.nci.nih.gov/.
    • (2006)
  • 36
    • 77958587449 scopus 로고    scopus 로고
    • Biocarta
    • Biocarta (2006) http://www.biocarta.com/genes/index.asp.
    • (2006)
  • 37
    • 77958557590 scopus 로고    scopus 로고
    • 126.dbSNP (accessed 2007)
    • 126.dbSNP (accessed 2007). http://www.ncbi.nlm.nih.gov/projects/SNP/.
  • 38
    • 33747824819 scopus 로고    scopus 로고
    • PupaSuite: Finding functional single nucleotide polymorphisms for large-scale genotyping purposes
    • Conde L, Vaquerizas JM, Dopazo H, Arbiza L, Reumers J, et al. (2006) PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes. Nucleic Acids Res 34: W621-W625.
    • (2006) Nucleic Acids Res , vol.34
    • Conde, L.1    Vaquerizas, J.M.2    Dopazo, H.3    Arbiza, L.4    Reumers, J.5
  • 40
    • 33847727035 scopus 로고    scopus 로고
    • How do microRNAs regulate gene expression?
    • re1
    • Jackson RJ, Standart N (2007) How do microRNAs regulate gene expression? Science (367): re1.
    • (2007) Science , vol.367
    • Jackson, R.J.1    Standart, N.2
  • 41
    • 77958522888 scopus 로고    scopus 로고
    • Genotyping Data Filter Software
    • Genotyping Data Filter Software (2009) http://bioinformatics.cesga.es/gdf/nav_input.php
    • (2009)
  • 42
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 44
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21: 263-265.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 45
    • 0041857847 scopus 로고    scopus 로고
    • Pedigree disequilibrium tests for multilocus haplotypes
    • Dudbridge F (2003) Pedigree disequilibrium tests for multilocus haplotypes. Genet Epidemiol 25: 115-121.
    • (2003) Genet Epidemiol , vol.25 , pp. 115-121
    • Dudbridge, F.1
  • 46
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A toolset for whole-genome association and population-based linkage-analysis
    • Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, et al. (2007) PLINK: a toolset for whole-genome association and population-based linkage-analysis. American Journal of Human Genetics; 81: 559-575. http://pngu.mgh.harvard.edu/,purcell/plink/.
    • (2007) American Journal of Human Genetics , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3    Thomas, L.4    Ferreira, M.A.5
  • 47
    • 31744435871 scopus 로고    scopus 로고
    • Joint analysis is more efficient than replication-based analysis for two-stage genome-wide association studies
    • Skol AD, Scott LJ, Abecasis GR, Boehnke M (2006) Joint analysis is more efficient than replication-based analysis for two-stage genome-wide association studies. Nat Genet 38: 209-213.
    • (2006) Nat Genet , vol.38 , pp. 209-213
    • Skol, A.D.1    Scott, L.J.2    Abecasis, G.R.3    Boehnke, M.4


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