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Volumn 75, Issue 8, 2010, Pages

Use of tuf gene-based primers for the PCR detection of probiotic Bifidobacterium species and enumeration of bifidobacteria in fermented milk by cultural and quantitative real-time PCR methods

Author keywords

Bifidobacterium spp.; Probiotics; Real time PCR; Tuf gene

Indexed keywords

BACTERIAL PROTEIN; ELONGATION FACTOR TU; PROBIOTIC AGENT; YOGHURT;

EID: 77958517564     PISSN: 00221147     EISSN: 17503841     Source Type: Journal    
DOI: 10.1111/j.1750-3841.2010.01816.x     Document Type: Article
Times cited : (40)

References (37)
  • 1
    • 1942443733 scopus 로고    scopus 로고
    • Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons
    • Acinas SG, Marcelino LA, Klepac-Ceraj V, Polz MF. 2004. Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons. J Bacteriol 186:2629-35.
    • (2004) J Bacteriol , vol.186 , pp. 2629-2635
    • Acinas, S.G.1    Marcelino, L.A.2    Klepac-Ceraj, V.3    Polz, M.F.4
  • 2
    • 0037126643 scopus 로고    scopus 로고
    • Comparison of partial tuf gene sequences for the identification of lactobacilli
    • Chavagnat F, Haueter M, Jimeno J, Casey MG. 2002. Comparison of partial tuf gene sequences for the identification of lactobacilli. FEMS Microbiol Lett 217:177-83.
    • (2002) FEMS Microbiol Lett , vol.217 , pp. 177-183
    • Chavagnat, F.1    Haueter, M.2    Jimeno, J.3    Casey, M.G.4
  • 3
    • 72449146308 scopus 로고    scopus 로고
    • Comparative study of a new quantitative real-time PCR targeting the xylulose-5-phosphate/fructose-6-phosphate phosphoketolase bifidobacterial gene (xfp) in faecal samples with two fluorescence in situ hybridization methods
    • Cleusix V, Lacroix C, Dasen G, Leo M, Le Blay G. 2010. Comparative study of a new quantitative real-time PCR targeting the xylulose-5-phosphate/fructose-6-phosphate phosphoketolase bifidobacterial gene (xfp) in faecal samples with two fluorescence in situ hybridization methods. J Appl Microbiol 108:181-93.
    • (2010) J Appl Microbiol , vol.108 , pp. 181-193
    • Cleusix, V.1    Lacroix, C.2    Dasen, G.3    Leo, M.4    Le Blay, G.5
  • 4
    • 8344268491 scopus 로고    scopus 로고
    • Numbers and strains of lactobacilli in some probiotic products
    • Coeuret V, Gueguen M, Vernoux JP. 2004. Numbers and strains of lactobacilli in some probiotic products. Int J Food Microbiol 97:147-56.
    • (2004) Int J Food Microbiol , vol.97 , pp. 147-156
    • Coeuret, V.1    Gueguen, M.2    Vernoux, J.P.3
  • 5
    • 67349174279 scopus 로고    scopus 로고
    • Characterization and quantification of feline fecal microbiota using cpn60 sequence-based methods and investigation of animal-to-animal variation in microbial population structure
    • Desai AR, Musil KM, Car AP, Hill JE. 2009. Characterization and quantification of feline fecal microbiota using cpn60 sequence-based methods and investigation of animal-to-animal variation in microbial population structure. Vet Microbiol 137:120-28.
    • (2009) Vet Microbiol , vol.137 , pp. 120-128
    • Desai, A.R.1    Musil, K.M.2    Car, A.P.3    Hill, J.E.4
  • 7
    • 33645238081 scopus 로고    scopus 로고
    • Determination of survival, identity and stress resistance of probiotic bifidobacteria in bio-yoghurt
    • Jayamanne VS, Adams MR. 2006. Determination of survival, identity and stress resistance of probiotic bifidobacteria in bio-yoghurt. Lett Appl Microbiol 42:189-94.
    • (2006) Lett Appl Microbiol , vol.42 , pp. 189-194
    • Jayamanne, V.S.1    Adams, M.R.2
  • 10
    • 70349669290 scopus 로고    scopus 로고
    • Quantification of live and dead probiotic bacteria in lyophilized product by real-time PCR and by flow cytometry
    • Kramer M, Chermajer N, Matifasic BB, Rogelj I, Kmeteee V. 2009. Quantification of live and dead probiotic bacteria in lyophilized product by real-time PCR and by flow cytometry. Appl Microbiol Biotechnd 84:1137-47.
    • (2009) Appl Microbiol Biotechnd , vol.84 , pp. 1137-1147
    • Kramer, M.1    Chermajer, N.2    Matifasic, B.B.3    Rogelj, I.4    Kmeteee, V.5
  • 11
    • 0030774468 scopus 로고    scopus 로고
    • Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine
    • Kullen M, Brady LJ, O'Sullivan DJ. 1997. Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine. FEMS Microbiol Lett 154:377-83.
    • (1997) FEMS Microbiol Lett , vol.154 , pp. 377-383
    • Kullen, M.1    Brady, L.J.2    O'Sullivan, D.J.3
  • 12
    • 23744462797 scopus 로고    scopus 로고
    • Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species-specific primers based on the region extending from 16S rRNA through 23S rRNA
    • Kwon HS, Yang EH, Lee SH, Yeon SW, Kang BH, Kim TY. 2005. Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species-specific primers based on the region extending from 16S rRNA through 23S rRNA. FEMS Microbiol Lett 250:55-62.
    • (2005) FEMS Microbiol Lett , vol.250 , pp. 55-62
    • Kwon, H.S.1    Yang, E.H.2    Lee, S.H.3    Yeon, S.W.4    Kang, B.H.5    Kim, T.Y.6
  • 13
    • 4444281821 scopus 로고    scopus 로고
    • The sequence heterogenicities among 16 rRNA genes of Salmonella serovars and the effects on the specificity of the primers designed
    • Lin CK, Hung CL, Chiang YC, Lin CM, Tsen HY. 2004. The sequence heterogenicities among 16 rRNA genes of Salmonella serovars and the effects on the specificity of the primers designed. Int J Food Microbiol 96:205-14.
    • (2004) Int J Food Microbiol , vol.96 , pp. 205-214
    • Lin, C.K.1    Hung, C.L.2    Chiang, Y.C.3    Lin, C.M.4    Tsen, H.Y.5
  • 14
    • 33845599134 scopus 로고    scopus 로고
    • Immune effect of heat killed multistrain of Lactobacillus acidophilus against Salmonella Typhimurium invasion to mice
    • Lin WH, Yu B, Lin CK, Hwang WZ, Tsen HY. 2006. Immune effect of heat killed multistrain of Lactobacillus acidophilus against Salmonella Typhimurium invasion to mice. J Appl Microbiol 102:22-31.
    • (2006) J Appl Microbiol , vol.102 , pp. 22-31
    • Lin, W.H.1    Yu, B.2    Lin, C.K.3    Hwang, W.Z.4    Tsen, H.Y.5
  • 15
    • 76949083518 scopus 로고    scopus 로고
    • Distinct Bifidobacterium strains drive different immune responses in vitro
    • López P, Gueimonde M, Margolles A, Suárez A. 2010. Distinct Bifidobacterium strains drive different immune responses in vitro. Int J Food Microbiol 138:157-65.
    • (2010) Int J Food Microbiol , vol.138 , pp. 157-165
    • López, P.1    Gueimonde, M.2    Margolles, A.3    Suárez, A.4
  • 17
    • 33846292587 scopus 로고    scopus 로고
    • Evaluation of real-time PCR targeting the 16S rRNA and recA genes for the enumeration of bifidobacteria in probiotic products
    • Masco L, Vanhoutte T, Temmerman R, Swings J, Huys G. 2006. Evaluation of real-time PCR targeting the 16S rRNA and recA genes for the enumeration of bifidobacteria in probiotic products. Int J Food Microbiol 113:351-7.
    • (2006) Int J Food Microbiol , vol.113 , pp. 351-357
    • Masco, L.1    Vanhoutte, T.2    Temmerman, R.3    Swings, J.4    Huys, G.5
  • 18
    • 0032878580 scopus 로고    scopus 로고
    • Distribution of bifidobacterial species in human intestinal microorganism examined with 16S rRNA-gene-targeted speciesspecific primers
    • Matsuki T, Watanabe K, Tanaka R, Fukuda M, Oyaizu H. 1999. Distribution of bifidobacterial species in human intestinal microorganism examined with 16S rRNA-gene-targeted speciesspecific primers. Appl Environ Microbiol 65:4506-12.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4506-4512
    • Matsuki, T.1    Watanabe, K.2    Tanaka, R.3    Fukuda, M.4    Oyaizu, H.5
  • 19
    • 47249156773 scopus 로고    scopus 로고
    • Proposal to reclassify the three biotypes of Bifidobacterium longum as three subspecies: Bifidobacterium longum subsp. longum subsp. nov., Bifidobacterium longum subsp. infantis comb. nov. and Bifidobacterium longum subsp. suis comb. nov
    • Mattarelli P, Bonaparte C, Pot B, Biavati B. 2008. Proposal to reclassify the three biotypes of Bifidobacterium longum as three subspecies: Bifidobacterium longum subsp. longum subsp. nov., Bifidobacterium longum subsp. infantis comb. nov. and Bifidobacterium longum subsp. suis comb. nov. Int J Syst Evol Microbiol 58:767-2.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 767-772
    • Mattarelli, P.1    Bonaparte, C.2    Pot, B.3    Biavati, B.4
  • 20
    • 0038664251 scopus 로고    scopus 로고
    • Multiplex PCR using 16S rRNA gene-targeted primers for the identification of bifidobacteria from human origin
    • Mullié C, Odou MF, Singer E, Romond MB, Izard D. 2003. Multiplex PCR using 16S rRNA gene-targeted primers for the identification of bifidobacteria from human origin. FEMS Microbiol Lett 222:129-36.
    • (2003) FEMS Microbiol Lett , vol.222 , pp. 129-136
    • Mullié, C.1    Odou, M.F.2    Singer, E.3    Romond, M.B.4    Izard, D.5
  • 21
    • 0023718984 scopus 로고    scopus 로고
    • Selective medium for isolation and enumeration of Bifidobacterium spp
    • Muñoa FJ, Pares R. 1998. Selective medium for isolation and enumeration of Bifidobacterium spp. Appl Environ Microbiol 54:1715-18.
    • (1998) Appl Environ Microbiol , vol.54 , pp. 1715-1718
    • Muñoa, F.J.1    Pares, R.2
  • 25
    • 33645061487 scopus 로고    scopus 로고
    • Selecting, testing and understanding probiotic microorganisms
    • Reid G, Kim SO, Köhler GA. 2006. Selecting, testing and understanding probiotic microorganisms. FEMS Immunol Med Microbiol 46(2):149-57.
    • (2006) FEMS Immunol Med Microbiol , vol.46 , Issue.2 , pp. 149-157
    • Reid, G.1    Kim, S.O.2    Köhler, G.A.3
  • 26
    • 20444456177 scopus 로고    scopus 로고
    • Overcoming the technological hurdles in the development of probiotic foods
    • Ross RP, Desmond CG, Fitzgerald F, Stanton C. 2005. Overcoming the technological hurdles in the development of probiotic foods. J Appl Microbiol 98:1410-7.
    • (2005) J Appl Microbiol , vol.98 , pp. 1410-1417
    • Ross, R.P.1    Desmond, C.G.2    Fitzgerald, F.3    Stanton, C.4
  • 27
    • 0034308019 scopus 로고    scopus 로고
    • Molecular differentiation of Bifidobacterium species with amplified ribosomal DNA restriction analysis and alignment of short regions of ldh gene
    • Roy D, Sirois S. 2001. Molecular differentiation of Bifidobacterium species with amplified ribosomal DNA restriction analysis and alignment of short regions of ldh gene. FEMS Microbiol Lett 191:17-24.
    • (2001) FEMS Microbiol Lett , vol.191 , pp. 17-24
    • Roy, D.1    Sirois, S.2
  • 29
    • 0034166933 scopus 로고    scopus 로고
    • Probiotic bacteria: enumeration and survival in dairy foods
    • Shah NP. 2000. Probiotic bacteria: enumeration and survival in dairy foods. J Dairy Sci 83:894-907.
    • (2000) J Dairy Sci , vol.83 , pp. 894-907
    • Shah, N.P.1
  • 30
    • 58149471071 scopus 로고    scopus 로고
    • Development and use of tuf gene-based primers for the mutiplex PCR detection of Lactobacillus acidophilus, L. casei group, L. delbrueckii and Bifdobacterium longum in commercial dairy products
    • Sheu SJ, Hwang WZ, Chen HC, Chiang YC, Tsen HY. 2009. Development and use of tuf gene-based primers for the mutiplex PCR detection of Lactobacillus acidophilus, L. casei group, L. delbrueckii and Bifdobacterium longum in commercial dairy products. J Food Prot 72:93-100.
    • (2009) J Food Prot , vol.72 , pp. 93-100
    • Sheu, S.J.1    Hwang, W.Z.2    Chen, H.C.3    Chiang, Y.C.4    Tsen, H.Y.5
  • 31
    • 54949088269 scopus 로고    scopus 로고
    • Detection of Bifidobacterium animalis subsp. lactis (Bb12) in the intestine after feeding of sows and their piglets
    • Solano-Aguilar G, Dawson H, Restrepo M, Andrews K, Vinyard BF, Urban J. 2008. Detection of Bifidobacterium animalis subsp. lactis (Bb12) in the intestine after feeding of sows and their piglets. Appl Environ Microbiol 74:6338-47.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 6338-6347
    • Solano-Aguilar, G.1    Dawson, H.2    Restrepo, M.3    Andrews, K.4    Vinyard, B.F.5    Urban, J.6
  • 32
    • 51849143412 scopus 로고    scopus 로고
    • Effects of amulti-strain probiotic (PrimaLac) on performance and antibody responses to Newcastle disease virus and infectious bursal disease virus vaccination in broiler chickens
    • Talebi A, Amirzadeh B, Mokhtari B, Gahri H. 2008. Effects of amulti-strain probiotic (PrimaLac) on performance and antibody responses to Newcastle disease virus and infectious bursal disease virus vaccination in broiler chickens. Avian Pathol 37:509-12.
    • (2008) Avian Pathol , vol.37 , pp. 509-512
    • Talebi, A.1    Amirzadeh, B.2    Mokhtari, B.3    Gahri, H.4
  • 33
    • 0030934185 scopus 로고    scopus 로고
    • Development of oligonucleotide primers from the 16S-23S intergenic sequences for identifying different dairy and probiotic lactic acid bacteria by PCR
    • Tilsala-Timisjarvi A, Alatossava T. 1997. Development of oligonucleotide primers from the 16S-23S intergenic sequences for identifying different dairy and probiotic lactic acid bacteria by PCR. Int J Food Microbiol 35:49-56.
    • (1997) Int J Food Microbiol , vol.35 , pp. 49-56
    • Tilsala-Timisjarvi, A.1    Alatossava, T.2
  • 34
    • 2142745366 scopus 로고    scopus 로고
    • Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis
    • Ventura M, ZinkR. 2003. Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis. Appl Environ Microbiol 69:7517-22.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 7517-7522
    • Ventura, M.1    Zink, R.2
  • 35
    • 0242657388 scopus 로고    scopus 로고
    • Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification
    • Ventura M, Canchaya C, Meylan V, Klaenhammer TR, Zink R. 2003. Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification. Appl Environ Microbiol 69:6908-22.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6908-6922
    • Ventura, M.1    Canchaya, C.2    Meylan, V.3    Klaenhammer, T.R.4    Zink, R.5
  • 36
    • 37549007931 scopus 로고    scopus 로고
    • Evaluation of the PCR method for the identification of Bifidobacterium species
    • Youn SY, Seo JM, Ji GE. 2008. Evaluation of the PCR method for the identification of Bifidobacterium species. Lett Appl Microbiol 46:7-13.
    • (2008) Lett Appl Microbiol , vol.46 , pp. 7-13
    • Youn, S.Y.1    Seo, J.M.2    Ji, G.E.3
  • 37
    • 0141725824 scopus 로고    scopus 로고
    • Species identification of genus Bifidobacterium based on partial HSP60 gene sequences and proposal of Bifidobacterium thermacidophilum subsp. porcinum subsp. nov
    • Zhu L, Li W, Dong X. 2003. Species identification of genus Bifidobacterium based on partial HSP60 gene sequences and proposal of Bifidobacterium thermacidophilum subsp. porcinum subsp. nov. Int J Syst Evol Microbiol 53:1619-23.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1619-1623
    • Zhu, L.1    Li, W.2    Dong, X.3


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