Systematics of Malaysian woolly bats (Vespertilionidae: Kerivoula) inferred from mitochondrial, nuclear, karyotypic, and morphological data

Journal of Mammalogy

Volumn 91, Issue 5, 2010, Pages 1058-1072

  Khan, Faisal Ali Anwarali ^a,b   Solari, Sergio ^a,c   Swier, Vicki J ^a   Larsen, Peter A ^a   Abdullah, M T ^b   Baker, Robert J ^a  

^a TEXAS TECH UNIVERSITY   (United States)

^b UNIVERSITI MALAYSIA SARAWAK   (Malaysia)

^c UNIVERSIDAD DE ANTIOQUIA   (Colombia)

Author keywords

amplified fragment length polymorphism; Borneo; cytochrome b; cytochrome c oxidase; karyotypes; Kerivoulinae; Malaysia; morphology; taxonomy

Indexed keywords

BAT; CLADISTICS; DATA SET; DATABASE; DIVERGENCE; ENZYME ACTIVITY; FUNCTIONAL MORPHOLOGY; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GEOGRAPHICAL VARIATION; IDENTIFICATION METHOD; INTERSPECIFIC VARIATION; KARYOTYPE; MITOCHONDRIAL DNA; MOLECULAR ANALYSIS; NEOGENE; OLIGOCENE; PLEISTOCENE; POLYMORPHISM; REFUGIUM; SPECIES DIVERSITY; TAXONOMY;

BORNEO; EAST MALAYSIA; MALAYSIA; SABAH;

KERIVOULA; KERIVOULA HARDWICKII; KERIVOULA INTERMEDIA; KERIVOULA LENIS; KERIVOULA MINUTA; KERIVOULA PAPILLOSA; KERIVOULINAE; VESPERTILIONIDAE;

EID: 77958514004     PISSN: 00222372     EISSN: 15451542     Source Type: Journal    
DOI: 10.1644/09-MAMM-A-361.1     Document Type: Article

References (81)

1. ANWARALI, F. A., ET AL. 2008. Using genetics and morphology to examine species diversity of Old World bats: report of a recent collection from Malaysia. Occasional Papers, Museum of Texas Tech University 281:1-28.
2. AVISE, J. C., AND D. WALKER. 1999. Species realities and numbers in sexual vertebrates: perspectives from an asexually transmitted genome. Proceedings of the National Academy of Sciences 96:992-995.
3. BAKER, R. J., AND R. D. BRADLEY. 2006. Speciation in mammals and the Genetic Species Concept. Journal of Mammalogy 87:643-662.
4. BAKER, R. J., M. HAMILTON, AND D. A. PARISH. 2003. Preparations of mammalian karyotypes under field conditions. Occasional Papers, Museum of Texas Tech University 228:1-8.
5. BATES, P. J. J., AND D. L. HARRISON. 2000. Bats of the Indian subcontinent. Macintosh and Windows version 1.0. Biodiversity Center of ETI, Multimedia Interactive Software. University of Amsterdam, Amsterdam, Netherlands.
6. BATES, P. J. J., ET AL. 2007. A new species of Kerivoula (Chiroptera: Vespertilionidae) from Southeast Asia. Acta Chiropterologica 9:323-337.
7. BATES P. J. J.,M. J. STRUEBIG,S. J. ROSSITER,T. KINGSTON,S. S. LIN OO, AND K. MYA MYA. 2004. A new species of Kerivoula (Chiroptera:Vespertilionidae) from Myanmar (Burma). Acta Chiropterologica 6:219-226.
8. BONIN, A., E. BELLEMAIN, P. B. EIDESEN, F. POMPANON, C. BROCHMANN, AND P. TABERLET. 2004. How to track and assess genotyping errors in population genetics studies. Molecular Ecology 13:3261-3273.
9. CHASEN, F. N. 1940. A handlist of Malaysian mammals. A systematic list of the mammals of the Malay Peninsula, Sumatra, Borneo and Jawa, including the adjacent small islands. Bulletin of the Raffles Museum, Straits Settlements 15:1-209.
10. CORBET, G. B., AND J. E. HILL. 1992. The mammals of the Indomalayan region: a systematic review. Oxford University Press, Oxford, United Kingdom.
11. DASILVA, M. N. F., AND J. L. PATTON. 1998. Molecular phylogeography and the evolution and conservation of Amazonian mammals. Molecular Ecology 7:475-486.
12. DRUMMOND, A. J., AND A. RAMBAUT. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7:214.
13. EDWARDS, S. V. 2009. Is a new and general theory of molecular systematics emerging? Evolution 63:1-19.
14. FRANCIS, C. M. 1989. A comparison of mist nets and two designs of harp traps for capturing bats. Journal of Mammalogy 70:865-870.
15. FRANCIS, C. M. 2008. A field guide to the mammals of South-East Asia. New Holland Publisher Ltd., London, United Kingdom.
16. FRANCIS, C. M., T. KINGSTON, AND A. ZUBAID. 2007. A new species of Kerivoula (Chiroptera: Vespertilionidae) from Peninsular Malaysia. Acta Chiropterologica 9:1-12.
17. GANNON W. L.,R. S. SIKES. 2007. Guidelines of the American Society of Mammalogists for the use of wild mammals in research. Journal of Mammalogy 88:809-823.
18. GASCUEL, O. 1997. BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Molecular Biology and Evolution 14:685-695.
19. GATHORNE-HARDY, F. J., SYAUKANI, R. G. DAVIES, P. EGGLETON, AND D. T. JONES. 2002. Quaternary rainforest refugia in south-east Asia: using termites (Isoptera) as indicators. Biological Journal of the Linnean Society 75:453-466.
20. GOROG, A. J., M. H. SINAGA, AND M. D. ENGSTROM. 2004. Vicariance or dispersal? Historical biogeography of three Sunda shelf murine rodents (Maxomys surifer, Leopaldamys sabanus and Maxomys whiteheadi). Biological Journal of the Linnean Society 81:91-109.
21. GUINDON, S., AND O. GASCUEL. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52:696-704.
22. HEANEY, L. R. 1991. A synoptic climatic and vegetational change in Southeat Asia. Climatic Change 19:53-61.
23. HEBERT, P. D. N., A. CYWINSKA, S. L. BALL, AND J. R. DEWAARD. 2003. Biological identifications through DNA barcodes. Proceedings of the Royal Society of London, B. Biological Sciences 270:313-321.
24. HILL, J. E. 1965. Asiatic bats of the genera Kerivoula and Phoniscus (Vespertilionidae). Mammalia 29:524-556.
25. HILL, J. E., AND C. M. FRANCIS. 1984. New bats (Mammalia: Chiroptera) and new records of bats from Borneo and Malaya. Bulletin of the British Museum (Natural History), Zoology Series 47:305-329.
26. HILL, J. E., AND F. G. ROZENDAAL. 1989. Records of bats (Microchiroptera) from Wallacea. Zoologische Mededelingen Leiden 63:97-122.
27. HILLIS, D. M., AND J. P. HUELSENBECK. 1992. Signal, noise and reliability in molecular phylogenetic analyses. Journal of Heredity 83:189-195.
28. HO, S. Y. W. 2007. Calibrating molecular estimates of substitution rates and divergence times in birds. Journal of Avian Biology 38:409-414.
29. HOOFER, S. R., AND R. A. VAN DEN BUSSCHE. 2003. Molecular phylogenetics of the chiropteran family Vespertilionidae. Acta Chiropterologica 5, supplement:1-63.
30. HORÁCEK, I. 2001. On the early history of vespertilionid bats in Europe: the lower Miocene record from the Bohemian Massif. Lynx 33:123-154.
31. HUELSENBECK, J. P., AND F. RONQUIST. 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17:754-755.
32. INGER, R. F., AND H. K. VORIS. 2001. The biogeographical relations of the frogs and snakes of Sundaland. Journal of Biogeography 28:863-891.
33. IRWIN, D. M., T. D. KOCHER, AND A. C.WILSON. 1991. Evolution of the cytochrome b gene of mammals. Journal of Molecular Evolution 32:128-144.
34. IVANOVA, N. V., J. R. DEWAARD, AND P. D. N. HEBERT. 2006. An inexpensive, automation-friendly protocol for recovering highquality DNA. Molecular Ecology Notes 6:998-1002.
35. JAYARAJ, V. K., F. A. ANWARALI, AND M. T. ABDULLAH. 2006. Bats of Mount Penrisen, Padawan, Sarawak. Sarawak Museum Journal 82:263-274.
36. KIEFER, A., F. MAYER, J. KOSUCH, O. vON HELVERSEN, AND M. WEITH. 2002. Conflicting molecular phylogenies of European long-eared bats (Plecotus) can be explained by cryptic diversity. Molecular Phylogenetics and Evolution 25:557-566.
37. KINGSTON, T., C. M. FRANCIS, Z. AKBAR, AND T. H. KUNZ. 2003. Species richness in an insectivorous bat assemblage from Malaysia. Journal of Tropical Ecology 19:67-79.
38. KINGSTON, T., G. JONES, Z. AKBAR, AND T. H. KUNZ. 1999. Echolocation signal design in Kerivoulinae and Murininae (Chiroptera: Vespertilionidae) from Malaysia. Journal of Zoology (London) 249:359-374.
39. KINGSTON, T., B. L. LIM, AND Z. AKBAR. 2006. Bats of Krau Wildlife Reserve. Penerbit Universiti KebangsaanMalaysia, Bangi,Malaysia.
40. KUMAR, S., K. TAMURA, AND M. NEI. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5:150-163.
41. LONGMIRE, J. L., M. MALTBIE, AND R. J. BAKER. 1997. Use of ''lysis buffer'' in DNA isolation and its implications for museum collections. Occasional Papers, The Museum, Texas Tech University 163:1-3.
42. LYON, M. W. 1911. Mammals collected by Dr. W. L. Abbott on Borneo and some of the small adjacent islands. Proceedings of the United States National Museum 40:53-146.
43. MAYER, F., AND O. vON HELVERSEN. 2001. Cryptic diversity in European bats. Proceedings of the Royal Society of London, B. Biological Sciences 268:1825-1832.
44. MCBEE, K., J. W. BICKHAM, S. YENBUTRA, J. NABHITABHATA, AND D. A. SCHLITTER. 1986. Standard karyology of nine species of verspertilionid bats (Chiroptera: Vespertilionidae) from Thailand. Annals of Carnegie Museum 55:95-116.
45. MCDONOUGH, M. M., L. K. AMMERMAN, R. M. TIMM, H. H. GENOWAYS, P. A. LARSEN, AND R. J. BAKER. 2008. Speciation within bonneted bats (genus Eumops): the complexity of morphological, mitochondrial, and nuclear data sets in systematics. Journal of Mammalogy 89:1306-1315.
46. MEDWAY, L. 1969. The wild mammals of Malaya and off shore islands including Singapore. Oxford University Press, Kuala Lumpur, Malaysia.
47. MEDWAY, L. 1983. The wild mammals of Malaya (Peninsular Malaysia) and Singapore. 2nd ed., revised. Oxford University Press, Kuala Lumpur, Malaysia.
48. MEIJAARD, E. 2003. Mammals of South-east Asian islands and their late Pleistocene environments. Journal of Biogeography 30:1245-1257.
49. MILLER, G. S. 1898. List of bats collected by Dr. W. L. Abbott in Siam. Proceedings of the Academy of Natural Sciences of Philadelphia 50:316-325.
50. MILLER, G. S. 1906. Seven new Malayan bats. Proceedings of the Biological Society of Washington 19:61-65.
51. MISHLER, B. D., AND E. THERIOT. 2000. The phylogenetic species concept sensu Mishler and Theriot: monophyly, apomorphy, and phylogenetic species concepts. Pp. 44-54 in Species concepts and phylogenetic theory: a debate (Q. D. Wheeler and R. Meier, eds.). Columbia University Press, New York.
52. MORITZ, C., AND C. CICERO. 2004. DNA barcoding: promise and pitfalls. PLoS Biology 2:1529-1531.
53. NYLANDER, J. A. A. 2004. MrModeltest 2.3. Program distributed by the author, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
54. PAYNE, J., AND C. M. FRANCIS. 1985. A field guide to the mammals of Borneo. Sabah Society and World Wildlife Fund, Kota Kinabalu, Malaysia.
55. PEAKALL, R., AND P. E. SMOUSE. 2006. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6:288-295.
56. PHILLIPS, C. D., C. A. HENARD, AND R. S. PFAU. 2007. Amplified fragment length polymorphism and mitochondrial DNA analyses reveal patterns of divergence and hybridization in the hispid cotton rat (Sigmodon hispidus). Journal of Mammalogy 88:351-359.
57. POSADA, D., AND K. A. CRANDALL. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
58. RAMBAUT, A. AND A. J. DRUMMOND. 2003. Tracer, version 1.3. http:// beast.bio.ed.ac.uk/tracer/. Accessed 1 January 2010.
59. RUEDI, M. 1996. Phylogenetic evolution and biogeography of Southeast Asian shrews (genus Crocidura: Soricidae). Biological Journal of the Linnean Society 58:197-219.
60. RUEDI, M., AND L. FUMAGALLI. 1996. Genetic structure of gymnures (genus Hylomys: Erinaceidae) on continental islands of Southeast Asia: historical effects of fragmentation. Journal of Zoological Systematics and Evolutionary Research 34:153-162.
61. RUEDI, M., AND F. MAYER. 2001. Molecular systematics of bats of the genus Myotis (Vespertilionidae) suggests deterministic ecomorphological convergences. Molecular Phylogenetics and Evolution 21:436-448.
62. SAIKI, R. K., ET AL. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239:487-491.
63. SIMMONS, N. B. 2005. Order Chiroptera. Pp. 312-529 in Mammal species of the world: a taxonomic and geographic reference (D. E. Wilson and D. M. Reeder, eds.). 3rd ed. Johns Hopkins University Press, Baltimore, Maryland.
64. SMITH, M. F., AND J. L. PATTON. 1993. The diversification of South American murid rodents: evidence from mitochondrial DNA sequence data for the akodontine tribe. Biological Journal of the Linnean Society 50:149-177.
65. SOISOOK, P., ET AL. 2007. First records of Kerivoula kachinensis (Chiroptera: Vespertilionidae) from Cambodia, Lao PDR and Thailand. Acta Chiropterologica 9:339-345.
66. SOLARI, S., ET AL. 2009. Operational criteria for genetically defined species: analysis of the diversification of the small fruit-eating bats, Dermanura (Phyllostomidae: Stenodermatinae). Acta Chiropterologica 11:279-288.
67. STADELMANN, B., D. S. JACOBS, C. SCHOEMAN, AND M. REUDI. 2004. Phylogeny of African Myotis bats (Chiroptera, Vespertilionidae) inferred from cytochrome b sequences. Acta Chiropterologica 6:177-192.
68. STRUEBIG, M., B. M. F. GALDIKAS, AND SUATMA. 2006. Bat diversity in oligotrophic forests of southern Borneo. Oryx 40:447-455.
69. SWOFFORD, D. L. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4.0 b10. Sinauer Associates, Inc., Publishers, Sunderland, Massachusetts.
70. TATE, G. H. H. 1941. Results of the Archbold expeditions. No.40. Notes on vespertilionid bats of the subfamilies Miniopterinae, Murininae, Kerivoulinae, and Nyctophilinae. Bulletin of the American Museum of Natural History 78:567-597.
71. TOMES, R. F. 1858. A monograph of the genus Kerivoula. Proceedings of the Zoological Society of London 26:322-338.
72. VANITHARANI, J., A. RAJENDRAN, P. J. J. BATES, D. L. HARRISON, AND M. J. PEARCH. 2003. A taxonomic reassessment of Kerivoula lenis Thomas, 1916 (Chiroptera: Vespertilionidae) including a first record from Peninsular India. Acta Chiropterologica 5:49-60.
73. VERSTAPPEN, H. T. 1997. The effect of climatic change on Southeast Asian geomorphology. Journal of Quaternary Science 12:413-418.
74. vON HELVERSEN, O., K. G. HELLER, F. MAYER, A. NEMETH, M. VOLLETH, AND P. GOMBKOTO. 2001. Cryptic mammalian species: a new species of whiskered bat (Myotis alcathoe, n. sp.) in Europe. Naturwissenschaften 88:217-223.
75. VORIS, H. K. 2000. Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems, and time durations. Journal of Biogeography 27:1153-1167.
76. VOS, P., ET AL. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23:4407-4414.
77. WATERHOUSE, G. R. 1845. Descriptions of species of bats collected in the Philippine Islands. Proceedings of the Zoological Society of London 13:3-10.
78. WHITMORE, T. C. 1981. Palaeoclimate and vegetation history. Pp. 36- 42 in Wallace's line and plate tectonics (T. C. Whitmore, ed.). Oxford Monograph on Biogeography 1. Clarendon Press, Oxford, United Kingdom.
79. WILL, K. W., AND D. RUBINOFF. 2004. Myth of the molecule: DNA barcodes for species cannot replace morphology for identification and classification. Cladistics 20:47-55.
80. WOODRUFF, D. S. 2003. Neogene marine transgressions, palaeogeography and biogeographic transitions on the Thai-Malay Peninsula. Journal of Biogeography 30:551-567.
81. XIA, X., AND Z. XIE. 2001. DAMBE: software package for data analysis in molecular biology and evolution. Journal of Heredity 92:371-373.