-
1
-
-
34250361148
-
Still stratus not altocumulus: Further evidence against the date/party hub distinction
-
Batada NN, et al. 2007. Still stratus not altocumulus: further evidence against the date/party hub distinction. PLoS Biol. 5: e154.
-
(2007)
PLoS Biol.
, vol.5
-
-
Batada, N.N.1
-
2
-
-
38949166378
-
Adaptive evolution of proteins secreted during sperm maturation: An analysis of the mouse epididymal transcriptome
-
Dean MD, Good JM, Nachman MW. 2008. Adaptive evolution of proteins secreted during sperm maturation: an analysis of the mouse epididymal transcriptome. Mol Biol Evol. 25:383-392.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 383-392
-
-
Dean, M.D.1
Good, J.M.2
Nachman, M.W.3
-
3
-
-
26444621352
-
Why highly expressed proteins evolve slowly
-
Drummond DA, Bloom JD, Adami C, Wilke CO, Arnold FH. 2005. Why highly expressed proteins evolve slowly. Proc Natl Acad Sci U S A. 102:14338-14343.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 14338-14343
-
-
Drummond, D.A.1
Bloom, J.D.2
Adami, C.3
Wilke, C.O.4
Arnold, F.H.5
-
4
-
-
30744441602
-
A single determinant dominates the rate of yeast protein evolution
-
Drummond DA, Raval A, Wilke CO. 2006. A single determinant dominates the rate of yeast protein evolution. Mol Biol Evol. 23:327-337.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 327-337
-
-
Drummond, D.A.1
Raval, A.2
Wilke, C.O.3
-
5
-
-
47549097539
-
Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution
-
Drummond DA, Wilke CO. 2008. Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. Cell. 134:341-352.
-
(2008)
Cell.
, vol.134
, pp. 341-352
-
-
Drummond, D.A.1
Wilke, C.O.2
-
6
-
-
0037177560
-
Evolutionary rate in the protein interaction network
-
Fraser HB, Hirsh AE, Steinmetz LM, Scharfe C, Feldman MW. 2002. Evolutionary rate in the protein interaction network. Science. 296:750-752.
-
(2002)
Science
, vol.296
, pp. 750-752
-
-
Fraser, H.B.1
Hirsh, A.E.2
Steinmetz, L.M.3
Scharfe, C.4
Feldman, M.W.5
-
8
-
-
33749563056
-
Protein evolution is faster outside the cell
-
Julenius K, Pedersen AG. 2006. Protein evolution is faster outside the cell. Mol Biol Evol. 23:2039-2048.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2039-2048
-
-
Julenius, K.1
Pedersen, A.G.2
-
9
-
-
34548539463
-
Understanding relationship between sequence and functional evolution in yeast proteins
-
Kim SH, Yi SV. 2007. Understanding relationship between sequence and functional evolution in yeast proteins. Genetica. 131:151-156.
-
(2007)
Genetica
, vol.131
, pp. 151-156
-
-
Kim, S.H.1
Yi, S.V.2
-
10
-
-
34447624151
-
Gene essentiality, gene duplicability and protein connectivity in human and mouse
-
Liang H, Li WH. 2007. Gene essentiality, gene duplicability and protein connectivity in human and mouse. Trends Genet. 23:375-378.
-
(2007)
Trends Genet.
, vol.23
, pp. 375-378
-
-
Liang, H.1
Li, W.H.2
-
11
-
-
33749579409
-
Impacts of gene essentiality, expression pattern, and gene compactness on the evolutionary rate of mammalian proteins
-
Liao BY, Scott NM, Zhang J. 2006. Impacts of gene essentiality, expression pattern, and gene compactness on the evolutionary rate of mammalian proteins. Mol Biol Evol. 23:2072-2080.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2072-2080
-
-
Liao, B.Y.1
Scott, N.M.2
Zhang, J.3
-
12
-
-
34447637417
-
Mouse duplicate genes are as essential as singletons
-
Liao BY, Zhang J. 2007. Mouse duplicate genes are as essential as singletons. Trends Genet. 23:378-381.
-
(2007)
Trends Genet.
, vol.23
, pp. 378-381
-
-
Liao, B.Y.1
Zhang, J.2
-
13
-
-
44349173103
-
Null mutations in human and mouse orthologs frequently result in different phenotypes
-
Liao BY, Zhang J. 2008. Null mutations in human and mouse orthologs frequently result in different phenotypes. Proc Natl Acad Sci U S A. 105:6987-6992.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 6987-6992
-
-
Liao, B.Y.1
Zhang, J.2
-
14
-
-
33644909094
-
The evolutionary rate of a protein is influenced by features of the interacting partners
-
Makino T, Gojobori T. 2006. The evolutionary rate of a protein is influenced by features of the interacting partners. Mol Biol Evol. 23:784-789.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 784-789
-
-
Makino, T.1
Gojobori, T.2
-
15
-
-
77958454054
-
Protein subcellular relocalization in the evolution of yeast singleton and duplicate genes
-
Qian W, Zhang J. 2009. Protein subcellular relocalization in the evolution of yeast singleton and duplicate genes. Genome Biol Evol. 2009:198-204.
-
(2009)
Genome Biol. Evol.
, vol.2009
, pp. 198-204
-
-
Qian, W.1
Zhang, J.2
-
16
-
-
11144358198
-
A gene atlas of the mouse and human proteinencoding transcriptomes
-
Su AI, et al. 2004. A gene atlas of the mouse and human proteinencoding transcriptomes. Proc Natl Acad Sci U S A. 101:6062-6067.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 6062-6067
-
-
Su, A.I.1
-
17
-
-
5044252972
-
Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome
-
Subramanian S, Kumar S. 2004. Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome. Genetics. 168:373-381.
-
(2004)
Genetics
, vol.168
, pp. 373-381
-
-
Subramanian, S.1
Kumar, S.2
-
18
-
-
33746218184
-
Evolution on the X chromosome: Unusual patterns and processes
-
Vicoso B, Charlesworth B. 2006. Evolution on the X chromosome: unusual patterns and processes. Nat Rev Genet. 7:645-653.
-
(2006)
Nat. Rev. Genet.
, vol.7
, pp. 645-653
-
-
Vicoso, B.1
Charlesworth, B.2
-
19
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Waterston RH, et al. 2002. Initial sequencing and comparative analysis of the mouse genome. Nature. 420:520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
-
20
-
-
0034622642
-
The molecular evolution of signal peptides
-
Williams EJ, Pal C, Hurst LD. 2000. The molecular evolution of signal peptides. Gene. 253:313-322.
-
(2000)
Gene
, vol.253
, pp. 313-322
-
-
Williams, E.J.1
Pal, C.2
Hurst, L.D.3
-
21
-
-
0347766006
-
Elevated rates of protein secretion, evolution, and disease among tissue-specific genes
-
Winter EE, Goodstadt L, Ponting CP. 2004. Elevated rates of protein secretion, evolution, and disease among tissue-specific genes. Genome Res. 14:54-61.
-
(2004)
Genome Res.
, vol.14
, pp. 54-61
-
-
Winter, E.E.1
Goodstadt, L.2
Ponting, C.P.3
-
22
-
-
67650904949
-
Integrated assessment of genomic correlates of protein evolutionary rate
-
Xia Y, Franzosa EA, Gerstein MB. 2009. Integrated assessment of genomic correlates of protein evolutionary rate. PLoS Comput Biol. 5: e1000413.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Xia, Y.1
Franzosa, E.A.2
Gerstein, M.B.3
-
23
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
24
-
-
16344369543
-
Significant impact of protein dispensability on the instantaneous rate of protein evolution
-
Zhang J, He X. 2005. Significant impact of protein dispensability on the instantaneous rate of protein evolution. Mol Biol Evol. 22:1147-1155.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1147-1155
-
-
Zhang, J.1
He, X.2
|