-
1
-
-
0029862735
-
Management of cocaine abuse and dependence
-
Mendelson, J. H.; Mello, N. K. Management of cocaine abuse and dependence New Engl. J. Med. 1996, 334, 965-972
-
(1996)
New Engl. J. Med.
, vol.334
, pp. 965-972
-
-
Mendelson, J.H.1
Mello, N.K.2
-
2
-
-
0030781787
-
Peripheral cocaine-blocking agents: New medications for cocaine dependence
-
Sparenborg, S.; Vocci, F.; Zukin, S. Peripheral cocaine-blocking agents: new medications for cocaine dependence Drug Alcohol Depend. 1997, 48, 149-151
-
(1997)
Drug Alcohol Depend.
, vol.48
, pp. 149-151
-
-
Sparenborg, S.1
Vocci, F.2
Zukin, S.3
-
3
-
-
0001384546
-
Chemistry, design, and structure-activity relationship of cocaine antagonists
-
Singh, S. Chemistry, design, and structure-activity relationship of cocaine antagonists Chem. Rev. 2000, 100, 925-1024
-
(2000)
Chem. Rev.
, vol.100
, pp. 925-1024
-
-
Singh, S.1
-
4
-
-
0346731232
-
Three-dimensional quantitative structure-activity relationship modeling of cocaine binding by a novel human monoclonal antibody
-
Paula, S.; Tabet, M. R.; Farr, C. D.; Norman, A. B.; Ball, W. J., Jr. Three-dimensional quantitative structure-activity relationship modeling of cocaine binding by a novel human monoclonal antibody J. Med. Chem. 2004, 47, 133-142
-
(2004)
J. Med. Chem.
, vol.47
, pp. 133-142
-
-
Paula, S.1
Tabet, M.R.2
Farr, C.D.3
Norman, A.B.4
Ball, Jr.W.J.5
-
5
-
-
0030735986
-
Enhancing cocaine metabolism with butyrylcholinesterase as a treatment strategy
-
Gorelick, D. A. Enhancing cocaine metabolism with butyrylcholinesterase as a treatment strategy Drug Alcohol Depend. 1997, 48, 159-165
-
(1997)
Drug Alcohol Depend.
, vol.48
, pp. 159-165
-
-
Gorelick, D.A.1
-
6
-
-
0001384546
-
Chemistry, design, and structure-activity relationship of cocaine antagonists
-
Singh, S. Chemistry, design, and structure-activity relationship of cocaine antagonists Chem. Rev. 2000, 100, 925-1024
-
(2000)
Chem. Rev.
, vol.100
, pp. 925-1024
-
-
Singh, S.1
-
7
-
-
0036696274
-
Monoamine transporter pharmacology and mutant mice
-
Gaintdinov, R. R.; Sotmikova, T. D.; Caron, M. G. Monoamine transporter pharmacology and mutant mice Trends Pharmacol. Sci. 2002, 231, 367-373
-
(2002)
Trends Pharmacol. Sci.
, vol.231
, pp. 367-373
-
-
Gaintdinov, R.R.1
Sotmikova, T.D.2
Caron, M.G.3
-
8
-
-
0037264650
-
Plasma membrane monoamine transporters: Structure, regulation and function
-
Torres, G. E.; Gainetdinov, R. R.; Caron, M. G. Plasma membrane monoamine transporters: structure, regulation and function Nat. Rev. Neurosci. 2003, 4, 13-25
-
(2003)
Nat. Rev. Neurosci.
, vol.4
, pp. 13-25
-
-
Torres, G.E.1
Gainetdinov, R.R.2
Caron, M.G.3
-
9
-
-
33745165213
-
Abolished cocaine reward in mice with a cocaine-insensitive dopamine transporter
-
Chen, R.; Tilley, M. R.; Wei, H.; Zhou, F.; Zhou, F.-M.; Ching, S.; Quan, N.; Stephens, R. L.; Hill, E. R.; Nottoli, T.; Han, D. D.; Gu, H. H. Abolished cocaine reward in mice with a cocaine-insensitive dopamine transporter Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 9333-9338
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 9333-9338
-
-
Chen, R.1
Tilley, M.R.2
Wei, H.3
Zhou, F.4
Zhou, F.-M.5
Ching, S.6
Quan, N.7
Stephens, R.L.8
Hill, E.R.9
Nottoli, T.10
Han, D.D.11
Gu, H.H.12
-
10
-
-
0027193032
-
Antibody-catalyzed degradation of cocaine
-
Landry, D. W.; Zhao, K.; Yang, G. X.-Q.; Glickman, M.; Georgiadis, T. M. Antibody-catalyzed degradation of cocaine Science 1993, 259, 1899-1901
-
(1993)
Science
, vol.259
, pp. 1899-1901
-
-
Landry, D.W.1
Zhao, K.2
Yang, G.X.-Q.3
Glickman, M.4
Georgiadis, T.M.5
-
11
-
-
0029563411
-
Suppression of psychoactive effects of cocaine by active immunization
-
Carrera, M. R. A.; Ashley, J. A.; Parsons, L. H.; Wirsching, P.; Koob, G. F.; Janda, K. D. Suppression of psychoactive effects of cocaine by active immunization Nature 1995, 378, 727-730
-
(1995)
Nature
, vol.378
, pp. 727-730
-
-
Carrera, M.R.A.1
Ashley, J.A.2
Parsons, L.H.3
Wirsching, P.4
Koob, G.F.5
Janda, K.D.6
-
12
-
-
0033724861
-
Natural and artificial enzymes against cocaine. I. Monoclonal antibody 15A10 and the reinforcing effects of cocaine in rats
-
Baird, T. J.; Deng, S.-X.; Landry, D. W.; Winger, G.; Woods, J. H. Natural and artificial enzymes against cocaine. I. Monoclonal antibody 15A10 and the reinforcing effects of cocaine in rats J. Pharmacol. Exp. Ther. 2000, 295, 1127-1134
-
(2000)
J. Pharmacol. Exp. Ther.
, vol.295
, pp. 1127-1134
-
-
Baird, T.J.1
Deng, S.-X.2
Landry, D.W.3
Winger, G.4
Woods, J.H.5
-
13
-
-
0035852712
-
A second-generation vaccine protects against the psychoactive effects of cocaine
-
Carrera, M. R. A.; Ashley, J. A.; Wirsching, P.; Koob, G. F.; Janda, K. D. A second-generation vaccine protects against the psychoactive effects of cocaine Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 1988-1992
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 1988-1992
-
-
Carrera, M.R.A.1
Ashley, J.A.2
Wirsching, P.3
Koob, G.F.4
Janda, K.D.5
-
14
-
-
0036837382
-
Anticocaine catalytic antibodies
-
Deng, S.-X.; de Prada, P.; Landry, D. W. Anticocaine catalytic antibodies J. Immunol. Methods 2002, 269, 299-310
-
(2002)
J. Immunol. Methods
, vol.269
, pp. 299-310
-
-
Deng, S.-X.1
De Prada, P.2
Landry, D.W.3
-
15
-
-
14744279617
-
Fluorescent cocaine probes: A tool for the selection and engineering of therapeutic antibodies
-
Meijler, M. M.; Kaufmann, G. F.; Qi, L. W.; Mee, J. M.; Coyle, A. R.; Moss, J. A.; Wirsching, P.; Matsushita, M.; Janda, K. D. Fluorescent cocaine probes: a tool for the selection and engineering of therapeutic antibodies J. Am. Chem. Soc. 2005, 127, 2477-2484
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 2477-2484
-
-
Meijler, M.M.1
Kaufmann, G.F.2
Qi, L.W.3
Mee, J.M.4
Coyle, A.R.5
Moss, J.A.6
Wirsching, P.7
Matsushita, M.8
Janda, K.D.9
-
16
-
-
23044513572
-
First-principle studies of intermolecular and intramolecular catalysis of protonated cocaine
-
Zhan, C.-G.; Deng, S.-X.; Skiba, J. G.; Hayes, B. A.; Tschampel, S. M.; Shields, G. C.; Landry, D. W. First-principle studies of intermolecular and intramolecular catalysis of protonated cocaine J. Comput. Chem. 2005, 26, 980-986
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 980-986
-
-
Zhan, C.-G.1
Deng, S.-X.2
Skiba, J.G.3
Hayes, B.A.4
Tschampel, S.M.5
Shields, G.C.6
Landry, D.W.7
-
17
-
-
42149093718
-
Modeling the catalysis of anti-cocaine catalytic antibody: Competing reaction pathways and free energy barriers
-
Pan, Y.; Gao, D.; Zhan, C.-G. Modeling the catalysis of anti-cocaine catalytic antibody: competing reaction pathways and free energy barriers J. Am. Chem. Soc. 2008, 130, 5140-5149
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 5140-5149
-
-
Pan, Y.1
Gao, D.2
Zhan, C.-G.3
-
18
-
-
0030780763
-
Differences in active site gorge dimensions of cholinesterases revealed by binding of inhibitors to human butyrylcholinesterase
-
Saxena, A.; Redman, A. M.; Jiang, X.; Lockridge, O.; Doctor, B. P. Differences in active site gorge dimensions of cholinesterases revealed by binding of inhibitors to human butyrylcholinesterase Biochemistry 1997, 36, 14642-14651
-
(1997)
Biochemistry
, vol.36
, pp. 14642-14651
-
-
Saxena, A.1
Redman, A.M.2
Jiang, X.3
Lockridge, O.4
Doctor, B.P.5
-
19
-
-
0242669341
-
Fundamental reaction mechanism for cocaine hydrolysis in human butyrylcholinesterase
-
Zhan, C.-G.; Zheng, F.; Landry, D. W. Fundamental reaction mechanism for cocaine hydrolysis in human butyrylcholinesterase J. Am. Chem. Soc. 2003, 125, 2462-2474
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 2462-2474
-
-
Zhan, C.-G.1
Zheng, F.2
Landry, D.W.3
-
20
-
-
27544478065
-
Large scale purification of butyrylcholinesterase from human plasma suitable for injection into monkeys; A potential new therapeutic for protection against cocaine and nerve agent toxicity
-
Jul 1; 3, nihms5095.
-
Lockridge, O.; Schopfer, L. M.; Winger, G.; Woods, J. H. Large scale purification of butyrylcholinesterase from human plasma suitable for injection into monkeys; a potential new therapeutic for protection against cocaine and nerve agent toxicity. J. Med. Chem. Biol. Radiol. Def. 2005, Jul 1; 3, nihms5095.
-
(2005)
J. Med. Chem. Biol. Radiol. Def.
-
-
Lockridge, O.1
Schopfer, L.M.2
Winger, G.3
Woods, J.H.4
-
21
-
-
30344445104
-
Modeling evolution of hydrogen bonding and stabilization of transition states in the process of cocaine hydrolysis catalyzed by human butyrylcholinesterase
-
Gao, D.; Zhan, C.-G. Modeling evolution of hydrogen bonding and stabilization of transition states in the process of cocaine hydrolysis catalyzed by human butyrylcholinesterase Proteins 2006, 62, 99-110
-
(2006)
Proteins
, vol.62
, pp. 99-110
-
-
Gao, D.1
Zhan, C.-G.2
-
22
-
-
29444441881
-
Modeling effects of oxyanion hole on the ester hydrolyses catalyzed by human cholinesterases
-
Gao, D.; Zhan, C.-G. Modeling effects of oxyanion hole on the ester hydrolyses catalyzed by human cholinesterases J. Phys. Chem. B 2005, 109, 23070-23076
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 23070-23076
-
-
Gao, D.1
Zhan, C.-G.2
-
23
-
-
31044435861
-
Computational design of a human butyrylcholinesterase mutant for accelerating cocaine hydrolysis based on the transition-state simulation
-
Gao, D.; Cho, H.; Yang, W.; Pan, Y.; Yang, G.; Tai, H. H.; Zhan, C. G. Computational design of a human butyrylcholinesterase mutant for accelerating cocaine hydrolysis based on the transition-state simulation Angew. Chem., Int. Ed. 2006, 45, 653-657
-
(2006)
Angew. Chem., Int. Ed.
, vol.45
, pp. 653-657
-
-
Gao, D.1
Cho, H.2
Yang, W.3
Pan, Y.4
Yang, G.5
Tai, H.H.6
Zhan, C.G.7
-
24
-
-
28444433108
-
Catalytic mechanism and energy barriers for butyrylcholinesterase- catalyzed hydrolysis of cocaine
-
Zhan, C.-G.; Gao, D. Catalytic mechanism and energy barriers for butyrylcholinesterase-catalyzed hydrolysis of cocaine Biophys. J. 2005, 89, 3863-3872
-
(2005)
Biophys. J.
, vol.89
, pp. 3863-3872
-
-
Zhan, C.-G.1
Gao, D.2
-
25
-
-
15944420158
-
Molecular dynamics simulation of cocaine binding with human butyrylcholinesterase and its mutants
-
Hamza, A.; Cho, H.; Tai, H.-H.; Zhan, C.-G. Molecular dynamics simulation of cocaine binding with human butyrylcholinesterase and its mutants J. Phys. Chem. B 2005, 109, 4776-4782
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 4776-4782
-
-
Hamza, A.1
Cho, H.2
Tai, H.-H.3
Zhan, C.-G.4
-
26
-
-
28044458963
-
Computational redesign of human butyrylcholinesterase for anticocaine medication
-
Pan, Y.; Gao, D.; Yang, W.; Cho, H.; Yang, G.; Tai, H.-H.; Zhan, C.-G. Computational redesign of human butyrylcholinesterase for anticocaine medication Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 16656-15661
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 16656-15661
-
-
Pan, Y.1
Gao, D.2
Yang, W.3
Cho, H.4
Yang, G.5
Tai, H.-H.6
Zhan, C.-G.7
-
27
-
-
35948998959
-
Free energy perturbation (FEP) simulation on the transition states of cocaine hydrolysis catalyzed by human butylrycholinesterase and its mutants
-
Pan, Y.; Gao, D.; Yang, W.; Cho, H.; Zhan, C.-G. Free energy perturbation (FEP) simulation on the transition states of cocaine hydrolysis catalyzed by human butylrycholinesterase and its mutants J. Am. Chem. Soc. 2007, 129, 13537-13543
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 13537-13543
-
-
Pan, Y.1
Gao, D.2
Yang, W.3
Cho, H.4
Zhan, C.-G.5
-
28
-
-
50249182994
-
Rational design of an enzyme mutant for anti-cocaine therapeutics
-
Zheng, F.; Zhan, C.-G. Rational design of an enzyme mutant for anti-cocaine therapeutics J. Comput.-Aided Mol. Des. 2008, 22, 661-671
-
(2008)
J. Comput.-Aided Mol. Des.
, vol.22
, pp. 661-671
-
-
Zheng, F.1
Zhan, C.-G.2
-
29
-
-
51749096409
-
Most efficient cocaine hydrolase designed by virtual screening of transition states
-
Zheng, F.; Yang, W.; Ko, M.-C.; Liu, J.; Cho, H.; Gao, D.; Tong, M.; Tai, H.-H.; Woods, J. H.; Zhan, C.-G. Most efficient cocaine hydrolase designed by virtual screening of transition states J. Am. Chem. Soc. 2008, 130, 12148-12155
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 12148-12155
-
-
Zheng, F.1
Yang, W.2
Ko, M.-C.3
Liu, J.4
Cho, H.5
Gao, D.6
Tong, M.7
Tai, H.-H.8
Woods, J.H.9
Zhan, C.-G.10
-
30
-
-
65549130638
-
Free-energy perturbation simulation on transition states and redesign of butyrylcholinesterase
-
Yang, W.; Pan, Y.; Zheng, F.; Cho, H.; Tai, H.-H.; Zhan, C.-G. Free-energy perturbation simulation on transition states and redesign of butyrylcholinesterase Biophys. J. 2009, 96, 1931-1938
-
(2009)
Biophys. J.
, vol.96
, pp. 1931-1938
-
-
Yang, W.1
Pan, Y.2
Zheng, F.3
Cho, H.4
Tai, H.-H.5
Zhan, C.-G.6
-
31
-
-
0036077314
-
Re-engineering butyrylcholinesterase as cocaine hydrolase
-
Sun, H.; Pang, Y.-P.; Lockridge, O.; Brimijoin, S. Re-engineering butyrylcholinesterase as cocaine hydrolase Mol. Pharmacol. 2002, 62, 220-224
-
(2002)
Mol. Pharmacol.
, vol.62
, pp. 220-224
-
-
Sun, H.1
Pang, Y.-P.2
Lockridge, O.3
Brimijoin, S.4
-
32
-
-
0142039868
-
Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products
-
Nicolet, Y.; Lockridge, O.; Masson, P.; Fontecilla-Camps, J. C.; Nachon, F. Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products J. Biol. Chem. 2003, 278, 41141-41147
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 41141-41147
-
-
Nicolet, Y.1
Lockridge, O.2
Masson, P.3
Fontecilla-Camps, J.C.4
Nachon, F.5
-
33
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein, F. C.; Koetzle, T. F.; Williams, G. J. B.; Meyer, E. F.; Brice, M. D.; Rodgers, J. R.; Kennard, O.; Shimanouchi, T.; Tasumi, M. The Protein Data Bank: a computer-based archival file for macromolecular structures J. Mol. Biol. 1977, 112, 535-542
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Meyer, E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
34
-
-
9244260409
-
-
University of California: San Francisco, CA.
-
Case, D. A.; Darden, T. A.; Cheatham, T. E., III; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Merz, K. M.; Wang, B.; Pearlman, D. A.; Crowley, M.; Brozell, S.; Tsui, V.; Gohlke, H.; Mongan, J.; Hornak, V.; Cui, G.; Beroza, P.; Schafmeister, C.; Caldwell, J. W.; Ross, W. S.; Kollman, P. A. AMBER 8; University of California: San Francisco, CA, 2004.
-
(2004)
AMBER 8
-
-
Case, D.A.1
Darden, T.A.2
Cheatham III, T.E.3
Simmerling, C.L.4
Wang, J.5
Duke, R.E.6
Luo, R.7
Merz, K.M.8
Wang, B.9
Pearlman, D.A.10
Crowley, M.11
Brozell, S.12
Tsui, V.13
Gohlke, H.14
Mongan, J.15
Hornak, V.16
Cui, G.17
Beroza, P.18
Schafmeister, C.19
Caldwell, J.W.20
Ross, W.S.21
Kollman, P.A.22
more..
-
35
-
-
0038626673
-
-
revision C.02; Gaussian, Inc.: Wallingford CT.
-
Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. J. A.; Vreven, T.; Kudin, K. N.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li, X.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A. Gaussian 03, revision C.02; Gaussian, Inc.: Wallingford CT, 2004.
-
(2004)
Gaussian 03
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Montgomery, J.J.A.7
Vreven, T.8
Kudin, K.N.9
Burant, J.C.10
Millam, J.M.11
Iyengar, S.S.12
Tomasi, J.13
Barone, V.14
Mennucci, B.15
Cossi, M.16
Scalmani, G.17
Rega, N.18
Petersson, G.A.19
Nakatsuji, H.20
Hada, M.21
Ehara, M.22
Toyota, K.23
Fukuda, R.24
Hasegawa, J.25
Ishida, M.26
Nakajima, T.27
Honda, Y.28
Kitao, O.29
Nakai, H.30
Klene, M.31
Li, X.32
Knox, J.E.33
Hratchian, H.P.34
Cross, J.B.35
Bakken, V.36
Adamo, C.37
Jaramillo, J.38
Gomperts, R.39
Stratmann, R.E.40
Yazyev, O.41
Austin, A.J.42
Cammi, R.43
Pomelli, C.44
Ochterski, J.W.45
Ayala, P.Y.46
Morokuma, K.47
Voth, G.A.48
Salvador, P.49
Dannenberg, J.J.50
Zakrzewski, V.G.51
Dapprich, S.52
Daniels, A.D.53
Strain, M.C.54
Farkas, O.55
Malick, D.K.56
Rabuck, A.D.57
Raghavachari, K.58
Foresman, J.B.59
Ortiz, J.V.60
Cui, Q.61
Baboul, A.G.62
Clifford, S.63
Cioslowski, J.64
Stefanov, B.B.65
Liu, G.66
Liashenko, A.67
Piskorz, P.68
Komaromi, I.69
Martin, R.L.70
Fox, D.J.71
Keith, T.72
Al-Laham, M.A.73
Peng, C.Y.74
Nanayakkara, A.75
Challacombe, M.76
Gill, P.M.W.77
Johnson, B.78
Chen, W.79
Wong, M.W.80
Gonzalez, C.81
Pople, J.A.82
more..
-
36
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W. Comparison of simple potential functions for simulating liquid water J. Chem. Phys. 1983, 79, 926-935
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
-
37
-
-
0034702646
-
Fluctuation formulas in molecular dynamics simulations with the weak coupling heat bath
-
Morishita, T. Fluctuation formulas in molecular dynamics simulations with the weak coupling heat bath J. Chem. Phys. 2000, 113, 2976-2982
-
(2000)
J. Chem. Phys.
, vol.113
, pp. 2976-2982
-
-
Morishita, T.1
-
38
-
-
33846823909
-
Particle mesh Ewald-an N-log(N) method for Ewald sums in large systems
-
Darden, T.; York, D.; Pedersen, L. Particle mesh Ewald-an N-log(N) method for Ewald sums in large systems J. Chem. Phys. 1993, 98, 10089-10092
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
39
-
-
0034506266
-
Efficient particle-mesh Ewald based approach to fixed and induced dipolar interactions
-
Toukmaji, A.; Sagui, C.; Board, J.; Darden, T. Efficient particle-mesh Ewald based approach to fixed and induced dipolar interactions J. Chem. Phys. 2000, 113, 10913-10927
-
(2000)
J. Chem. Phys.
, vol.113
, pp. 10913-10927
-
-
Toukmaji, A.1
Sagui, C.2
Board, J.3
Darden, T.4
-
40
-
-
33646940952
-
Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n -alkanes
-
Ryckaert, J.; Ciccotti, P. G.; Berendsen, H. J. C. Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n -alkanes J. Comput. Phys. 1977, 23, 327-341
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.1
Ciccotti, P.G.2
Berendsen, H.J.C.3
-
41
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.; DiNola, A.; Haak, J. R. Molecular dynamics with coupling to an external bath J. Chem. Phys. 1984, 81, 3684-3690
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
42
-
-
0342929614
-
Nonphysical sampling distribution in Monte Carlo free-energy estimation: Umbrella sampling
-
Torrie, G. M.; Valleau, J. P. Nonphysical sampling distribution in Monte Carlo free-energy estimation: umbrella sampling J. Comput. Phys. 1977, 23, 187-199
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 187-199
-
-
Torrie, G.M.1
Valleau, J.P.2
-
43
-
-
33646471468
-
Statistical mechanics of fluid mixtures
-
Kirkwood, J. G. Statistical mechanics of fluid mixtures J. Chem. Phys. 1935, 3, 300-313
-
(1935)
J. Chem. Phys.
, vol.3
, pp. 300-313
-
-
Kirkwood, J.G.1
-
44
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules. I. Method
-
Kumar, S.; Bouzida, D.; Swendsen, R. H.; Kollman, P. A.; Rosenberg, J. The weighted histogram analysis method for free-energy calculations on biomolecules. I. Method J. Comput. Chem. 1992, 13, 1011-1021
-
(1992)
J. Comput. Chem.
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.5
-
45
-
-
0029633155
-
The calculation of the potential of mean force using computer simulations
-
Roux, B. The calculation of the potential of mean force using computer simulations Comput. Phys. Commun. 1995, 91, 275-282
-
(1995)
Comput. Phys. Commun.
, vol.91
, pp. 275-282
-
-
Roux, B.1
-
46
-
-
33749331062
-
Targeted molecular dynamics study of C-loop closure and channel gating in nicotinic receptors
-
Cheng, X.; Wang, H.; Grant, B.; Sine, S. M.; McCammon, J. A. Targeted molecular dynamics study of C-loop closure and channel gating in nicotinic receptors PLoS Comput. Biol. 2006, 2, 1173-1184
-
(2006)
PLoS Comput. Biol.
, vol.2
, pp. 1173-1184
-
-
Cheng, X.1
Wang, H.2
Grant, B.3
Sine, S.M.4
McCammon, J.A.5
-
47
-
-
35148826056
-
The free energy landscapes governing conformational changes in a glutamate receptor ligand-binding domain
-
Lau, A. Y.; Roux, B. The free energy landscapes governing conformational changes in a glutamate receptor ligand-binding domain Structure 2007, 15, 1203-1214
-
(2007)
Structure
, vol.15
, pp. 1203-1214
-
-
Lau, A.Y.1
Roux, B.2
-
48
-
-
2142746284
-
The activated complex in chemical reactions
-
Eyring, H. The activated complex in chemical reactions J. Chem. Phys. 1935, 3, 107-115
-
(1935)
J. Chem. Phys.
, vol.3
, pp. 107-115
-
-
Eyring, H.1
-
49
-
-
0030218764
-
Current status of transition-state theory
-
Truhlar, D. G.; Garrett, B. C.; Klippenstein, S. J. Current status of transition-state theory J. Phys. Chem. 1996, 100, 12771-12800
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 12771-12800
-
-
Truhlar, D.G.1
Garrett, B.C.2
Klippenstein, S.J.3
|