-
1
-
-
23944492134
-
Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database
-
DOI 10.1002/pmic.200500358
-
GS Omenn DJ States M Adamski, et al. 2005 Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database Proteomics 5 3226 3245 1:CAS:528:DC%2BD2MXps12it7s%3D 10.1002/pmic.200500358 16104056 (Pubitemid 41192032)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3226-3245
-
-
Omenn, G.S.1
States, D.J.2
Adamski, M.3
Blackwell, T.W.4
Menon, R.5
Hermjakob, H.6
Apweiler, R.7
Haab, B.B.8
Simpson, R.J.9
Eddes, J.S.10
Kapp, E.A.11
Moritz, R.L.12
Chan, D.W.13
Rai, A.J.14
Admon, A.15
Aebersold, R.16
Eng, J.17
Hancock, W.S.18
Hefta, S.A.19
Meyer, H.20
Paik, Y.-K.21
Yoo, J.-S.22
Ping, P.23
Pounds, J.24
Adkins, J.25
Qian, X.26
Wang, R.27
Wasinger, V.28
Wu, C.Y.29
Zhao, X.30
Zeng, R.31
Archakov, A.32
Tsugita, A.33
Beer, I.34
Pandey, A.35
Pisano, M.36
Andrews, P.37
Tammen, H.38
Speicher, D.W.39
Hanash, S.M.40
more..
-
2
-
-
11844277616
-
An optimized protocol for nano-LC-MALDI-TOF-MS coupling for the analysis of proteolytic digests of glycoproteins
-
DOI 10.1002/bmc.399
-
G Lochnit R Geyer 2004 An optimized protocol for nano-LC-MALDI-TOF-MS coupling for the analysis of proteolytic digests of glycoproteins Biomed Chromatogr 18 841 848 1:CAS:528:DC%2BD2MXjtVWltA%3D%3D 10.1002/bmc.399 15386570 (Pubitemid 40089857)
-
(2004)
Biomedical Chromatography
, vol.18
, Issue.10
, pp. 841-848
-
-
Lochnit, G.1
Geyer, R.2
-
3
-
-
23944475619
-
Differences among techniques for high-abundant protein depletion
-
DOI 10.1002/pmic.200402021
-
N Zolotarjova J Martosella G Nicol, et al. 2005 Differences among techniques for high-abundant protein depletion Proteomics 5 3304 3313 1:CAS:528:DC%2BD2MXps12itL4%3D 10.1002/pmic.200402021 16052628 (Pubitemid 41192037)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3304-3313
-
-
Zolotarjova, N.1
Martosella, J.2
Nicol, G.3
Bailey, J.4
Boyes, B.E.5
Barrett, W.C.6
-
4
-
-
33750112796
-
Protein Equalizer Technology: The quest for a "democratic proteome"
-
1:CAS:528:DC%2BD28XnvFalsb4%3D 10.1002/pmic.200500904 16800034
-
PG Righetti E Boschetti L Lomas, et al. 2006 Protein Equalizer Technology: the quest for a "democratic proteome" Proteomics 6 3980 3992 1:CAS:528:DC%2BD28XnvFalsb4%3D 10.1002/pmic.200500904 16800034
-
(2006)
Proteomics
, vol.6
, pp. 3980-3992
-
-
Righetti, P.G.1
Boschetti, E.2
Lomas, L.3
-
5
-
-
70449558565
-
A technically detailed and pragmatic protocol for quantitative serum proteomics using iTRAQ
-
1:CAS:528:DC%2BD1MXhsVWqu7rI 10.1016/j.jprot.2009.07.009 19651253
-
S Tonack M Aspinall-O'Dea RE Jenkins, et al. 2009 A technically detailed and pragmatic protocol for quantitative serum proteomics using iTRAQ J Proteomics 73 352 356 1:CAS:528:DC%2BD1MXhsVWqu7rI 10.1016/j.jprot.2009.07.009 19651253
-
(2009)
J Proteomics
, vol.73
, pp. 352-356
-
-
Tonack, S.1
Aspinall-O'Dea, M.2
Jenkins, R.E.3
-
6
-
-
60849093488
-
Biomarker discovery in low-grade breast cancer using isobaric stable isotope tags and two-dimensional liquid chromatography-tandem mass spectrometry (iTRAQ-2DLC-MS/MS) based quantitative proteomic analysis
-
1:CAS:528:DC%2BD1cXhsVShsLvN 10.1021/pr800622b 19053527
-
P Bouchal T Roumeliotis R Hrstka, et al. 2009 Biomarker discovery in low-grade breast cancer using isobaric stable isotope tags and two-dimensional liquid chromatography-tandem mass spectrometry (iTRAQ-2DLC-MS/MS) based quantitative proteomic analysis J Proteome Res 8 362 373 1:CAS:528: DC%2BD1cXhsVShsLvN 10.1021/pr800622b 19053527
-
(2009)
J Proteome Res
, vol.8
, pp. 362-373
-
-
Bouchal, P.1
Roumeliotis, T.2
Hrstka, R.3
-
7
-
-
35648942133
-
8-Plex quantitation of changes in cerebrospinal fluid protein expression in subjects undergoing intravenous immunoglobulin treatment for Alzheimer's disease
-
DOI 10.1002/pmic.200700316
-
L Choe M D'Ascenzo NR Relkin, et al. 2007 8-plex quantitation of changes in cerebrospinal fluid protein expression in subjects undergoing intravenous immunoglobulin treatment for Alzheimer's disease Proteomics 7 3651 3660 1:CAS:528:DC%2BD2sXhtlShsbrO 10.1002/pmic.200700316 17880003 (Pubitemid 350022271)
-
(2007)
Proteomics
, vol.7
, Issue.20
, pp. 3651-3660
-
-
Choe, L.1
D'Ascenzo, M.2
Relkin, N.R.3
Pappin, D.4
Ross, P.5
Williamson, B.6
Guertin, S.7
Pribil, P.8
Lee, K.H.9
-
8
-
-
41949139372
-
Quantitative shotgun proteomics of enriched heterocysts from Nostoc sp. PCC 7120 using 8-plex isobaric peptide tags
-
1:CAS:528:DC%2BD1cXitlejtbg%3D 10.1021/pr700604v 18290607
-
SY Ow T Cardona A Taton, et al. 2008 Quantitative shotgun proteomics of enriched heterocysts from Nostoc sp. PCC 7120 using 8-plex isobaric peptide tags J Proteome Res 7 1615 1628 1:CAS:528:DC%2BD1cXitlejtbg%3D 10.1021/pr700604v 18290607
-
(2008)
J Proteome Res
, vol.7
, pp. 1615-1628
-
-
Ow, S.Y.1
Cardona, T.2
Taton, A.3
-
9
-
-
74049118091
-
A proteomic approach for plasma biomarker discovery with iTRAQ labelling and OFFGEL fractionation
-
E Ernoult A Bourreau E Gamelin, et al. 2010 A proteomic approach for plasma biomarker discovery with iTRAQ labelling and OFFGEL fractionation J Biomed Biotechnol 2010 917 927
-
(2010)
J Biomed Biotechnol
, vol.2010
, pp. 917-927
-
-
Ernoult, E.1
Bourreau, A.2
Gamelin, E.3
-
10
-
-
51649090933
-
ITRAQ experimental design for plasma biomarker discovery
-
1:CAS:528:DC%2BD1cXntVyhurg%3D 10.1021/pr800072x 18549257
-
X Song J Bandow J Sherman, et al. 2008 iTRAQ experimental design for plasma biomarker discovery J Proteome Res 7 2952 2958 1:CAS:528: DC%2BD1cXntVyhurg%3D 10.1021/pr800072x 18549257
-
(2008)
J Proteome Res
, vol.7
, pp. 2952-2958
-
-
Song, X.1
Bandow, J.2
Sherman, J.3
-
11
-
-
39149098117
-
Identification of serum biomarkers in brain-injured adults: Potential for predicting elevated intracranial pressure
-
DOI 10.1089/neu.2007.0386
-
G Hergenroeder JB Redell AN Moore, et al. 2008 Identification of serum biomarkers in brain-injured adults: potential for predicting elevated intracranial pressure J Neurotrauma 25 79 93 10.1089/neu.2007.0386 18260791 (Pubitemid 351252579)
-
(2008)
Journal of Neurotrauma
, vol.25
, Issue.2
, pp. 79-93
-
-
Hergenroeder, G.1
Redell, J.B.2
Moore, A.N.3
Dubinsky, W.P.4
Funk, R.T.5
Crommett, J.6
Clifton, G.L.7
Levine, R.8
Valadka, A.9
Dash, P.K.10
-
12
-
-
23944520883
-
HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples
-
DOI 10.1002/pmic.200401245
-
AJ Rai CA Gelfand BC Haywood, et al. 2005 HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples Proteomics 5 3262 3277 1:CAS:528:DC%2BD2MXps12it7k%3D 10.1002/pmic.200401245 16052621 (Pubitemid 41192034)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3262-3277
-
-
Rai, A.J.1
Gelfand, C.A.2
Haywood, B.C.3
Warunek, D.J.4
Yi, J.5
Schuchard, M.D.6
Mehigh, R.J.7
Cockrill, S.L.8
Scott, G.B.I.9
Tammen, H.10
Schulz-Knappe, P.11
Speicher, D.W.12
Vitzthum, F.13
Haab, B.B.14
Siet, G.15
Chan, D.W.16
-
13
-
-
34848889259
-
The paragon algorithm, a next generation search engine that uses sequence temperature values sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
DOI 10.1074/mcp.T600050-MCP200
-
IV Shilov SL Seymour AA Patel, et al. 2007 The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra Mol Cell Proteomics 6 1638 1655 1:CAS:528:DC%2BD2sXhtVGqsr3N 10.1074/mcp.T600050-MCP200 17533153 (Pubitemid 47506173)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.9
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymourt, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
Hunter, C.L.7
Nuwaysir, L.M.8
Schaeffer, D.A.9
-
14
-
-
44449120368
-
Immunoaffinity fractionation of plasma proteins by chicken IgY antibodies
-
1:CAS:528:DC%2BD1cXltVKms78%3D 10.1007/978-1-60327-210-0-4 18369885
-
L Huang X Fang 2008 Immunoaffinity fractionation of plasma proteins by chicken IgY antibodies Methods Mol Biol 425 41 51 1:CAS:528:DC%2BD1cXltVKms78%3D 10.1007/978-1-60327-210-0-4 18369885
-
(2008)
Methods Mol Biol
, vol.425
, pp. 41-51
-
-
Huang, L.1
Fang, X.2
-
15
-
-
55249123169
-
Evaluation of the combination of bead technology with SELDI-TOF-MS and 2-D DIGE for detection of plasma proteins
-
1:CAS:528:DC%2BD1cXps1Kms7s%3D 10.1021/pr800340c 18690747
-
C Sihlbom I Kanmert H Bahr, et al. 2008 Evaluation of the combination of bead technology with SELDI-TOF-MS and 2-D DIGE for detection of plasma proteins J Proteome Res 7 4191 4198 1:CAS:528:DC%2BD1cXps1Kms7s%3D 10.1021/pr800340c 18690747
-
(2008)
J Proteome Res
, vol.7
, pp. 4191-4198
-
-
Sihlbom, C.1
Kanmert, I.2
Bahr, H.3
-
16
-
-
4344574540
-
Large-scale characterization of HeLa cell nuclear phosphoproteins
-
DOI 10.1073/pnas.0404720101
-
SA Beausoleil M Jedrychowski D Schwartz, et al. 2004 Large-scale characterization of HeLa cell nuclear phosphoproteins Proc Natl Acad Sci USA 101 12130 12135 1:CAS:528:DC%2BD2cXntFeksLc%3D 10.1073/pnas.0404720101 15302935 (Pubitemid 39145408)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.33
, pp. 12130-12135
-
-
Beausoleil, S.A.1
Jedrychowski, M.2
Schwartz, D.3
Elias, J.E.4
Villen, J.5
Li, J.6
Cohn, M.A.7
Cantley, L.C.8
Gygi, S.P.9
-
17
-
-
0033051101
-
Direct analysis of protein complexes using mass spectrometry
-
DOI 10.1038/10890
-
AJ Link J Eng DM Schieltz, et al. 1999 Direct analysis of protein complexes using mass spectrometry Nat Biotechnol 17 676 682 1:CAS:528: DyaK1MXksFehsLc%3D 10.1038/10890 10404161 (Pubitemid 29316146)
-
(1999)
Nature Biotechnology
, vol.17
, Issue.7
, pp. 676-682
-
-
Link, A.J.1
Eng, J.2
Schieltz, D.M.3
Carmack, E.4
Mize, G.J.5
Morris, D.R.6
Garvik, B.M.7
Yates III, J.R.8
-
18
-
-
55049110246
-
Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation
-
10.1186/1477-5956-6-27 18851748
-
E Ernoult E Gamelin C Guette 2008 Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation Proteome Sci 6 27 10.1186/1477-5956-6-27 18851748
-
(2008)
Proteome Sci
, vol.6
, pp. 27
-
-
Ernoult, E.1
Gamelin, E.2
Guette, C.3
-
19
-
-
33748575600
-
A novel approach and protocol for discovering extremely low-abundance proteins in serum
-
DOI 10.1002/pmic.200500774
-
Y Tanaka H Akiyama T Kuroda, et al. 2006 A novel approach and protocol for discovering extremely low-abundance proteins in serum Proteomics 6 4845 4855 1:CAS:528:DC%2BD28XhtVSkt7nO 10.1002/pmic.200500774 16878292 (Pubitemid 44369064)
-
(2006)
Proteomics
, vol.6
, Issue.17
, pp. 4845-4855
-
-
Tanaka, Y.1
Akiyama, H.2
Kuroda, T.3
Jung, G.4
Tanahashi, K.5
Sugaya, H.6
Utsumi, J.7
Kawasaki, H.8
Hirano, H.9
-
20
-
-
0030174627
-
Kallistatin, a novel human tissue kallikrein inhibitor: Levels in body fluids, blood cells, and tissues in health and disease
-
DOI 10.1016/S0022-2143(96)90152-3
-
J Chao A Schmaier LM Chen, et al. 1996 Kallistatin, a novel human tissue kallikrein inhibitor: levels in body fluids, blood cells, and tissues in health and disease J Lab Clin Med 127 612 620 1:CAS:528:DyaK28XktlCgu7Y%3D 10.1016/S0022-2143(96)90152-3 8648266 (Pubitemid 26310340)
-
(1996)
Journal of Laboratory and Clinical Medicine
, vol.127
, Issue.6
, pp. 612-620
-
-
Chao, J.1
Schmaier, A.2
Chen, L.-M.3
Yang, Z.4
Chao, L.5
-
21
-
-
48149106752
-
Ficolins and Mannose-Binding Lectin in Danish patients with sarcoidosis
-
10.1016/j.rmed.2008.04.012 18585026
-
CB Svendsen T Hummelshoj L Munthe-Fog, et al. 2008 Ficolins and Mannose-Binding Lectin in Danish patients with sarcoidosis Respir Med 102 1237 1242 10.1016/j.rmed.2008.04.012 18585026
-
(2008)
Respir Med
, vol.102
, pp. 1237-1242
-
-
Svendsen, C.B.1
Hummelshoj, T.2
Munthe-Fog, L.3
-
22
-
-
0033403423
-
Serum levels of tetranectin, intercellular adhesion molecule-1 and interleukin-10 in B-chronic lymphocytic leukemia
-
DOI 10.1016/S0009-9120(99)00066-1, PII S0009912099000661
-
EF Kamper AD Papaphilis MK Angelopoulou, et al. 1999 Serum levels of tetranectin, intercellular adhesion molecule-1 and interleukin-10 in B-chronic lymphocytic leukemia Clin Biochem 32 639 645 1:CAS:528:DC%2BD3cXos12juw%3D%3D 10.1016/S0009-9120(99)00066-1 10638947 (Pubitemid 30039093)
-
(1999)
Clinical Biochemistry
, vol.32
, Issue.8
, pp. 639-645
-
-
Kamper, E.F.1
Papahiliss, A.D.2
Angelopoulou, M.K.3
Kopeikina, L.T.4
Siakantaris, M.P.5
Pangalis, G.A.6
Stavrudis, J.C.7
-
23
-
-
0032977674
-
Does properdin crosslink the cellular and the humoral immune response?
-
DOI 10.1016/S0167-5699(98)01376-0, PII S0167569998013760
-
WJ Schwaeble KB Reid 1999 Does properdin crosslink the cellular and the humoral immune response? Immunol Today 20 17 21 1:CAS:528:DyaK1MXpsFKhuw%3D%3D 10.1016/S0167-5699(98)01376-0 10081225 (Pubitemid 29136545)
-
(1999)
Immunology Today
, vol.20
, Issue.1
, pp. 17-21
-
-
Schwaeble, W.J.1
Reid, K.B.M.2
-
24
-
-
0034884805
-
Production and application of monoclonal antibodies to human selenoprotein P
-
DOI 10.1248/jhs.47.346
-
Y Saito Y Watanabe E Saito, et al. 2001 Production and application of monoclonal antibodies to human Selenoprotein P J Health Sci 47 346 352 1:CAS:528:DC%2BD3MXlslynurY%3D 10.1248/jhs.47.346 (Pubitemid 32744128)
-
(2001)
Journal of Health Science
, vol.47
, Issue.4
, pp. 346-352
-
-
Saito, Y.1
Watanabe, Y.2
Saito, E.3
Honjoh, T.4
Takahashi, K.5
-
25
-
-
0037014564
-
CD14 C(-260)→T polymorphism, plasma levels of the soluble endotoxin receptor CD14, their association with chronic infections and risk of stable coronary artery disease
-
DOI 10.1016/S0735-1097(02)01937-X, PII S073510970201937X
-
W Koenig N Khuseyinova MM Hoffmann, et al. 2002 CD14 C(-260)→T polymorphism, plasma levels of the soluble endotoxin receptor CD14, their association with chronic infections and risk of stable coronary artery disease J Am Coll Cardiol 40 34 42 1:CAS:528:DC%2BD38Xls1Cqsro%3D 10.1016/S0735-1097(02) 01937-X 12103253 (Pubitemid 34701374)
-
(2002)
Journal of the American College of Cardiology
, vol.40
, Issue.1
, pp. 34-42
-
-
Koenig, W.1
Khuseyinova, N.2
Hoffmann, M.M.3
Marz, W.4
Frohlich, M.5
Hoffmeister, A.6
Brenner, H.7
Rothenbacher, D.8
-
26
-
-
23944505253
-
Exploring the Human Plasma Proteome: Editorial
-
DOI 10.1002/pmic.200590056
-
GS Omenn 2005 Exploring the human plasma proteome Proteomics 5 3223 3225 1:CAS:528:DC%2BD2MXps12it7o%3D 10.1002/pmic.200590056 16104055 (Pubitemid 41192031)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3223-3225
-
-
Omenn, G.S.1
-
27
-
-
23944472689
-
Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: Systematic variation between sample types and calibration of mass spectrometry data
-
DOI 10.1002/pmic.200401276
-
BB Haab BH Geierstanger G Michailidis, et al. 2005 Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: systematic variation between sample types and calibration of mass spectrometry data Proteomics 5 3278 3291 1:CAS:528:DC%2BD2MXps12it7Y%3D 10.1002/pmic.200401276 16038022 (Pubitemid 41192035)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3278-3291
-
-
Haab, B.B.1
Geierstanger, B.H.2
Michailidis, G.3
Vitzthum, F.4
Forrester, S.5
Okon, R.6
Saviranta, P.7
Brinker, A.8
Sorette, M.9
Perlee, L.10
Suresh, S.11
Drwal, C.12
Adkins, J.N.13
Omenn, G.S.14
-
28
-
-
54249125034
-
Elevated serum concentrations of activated hepatocyte growth factor activator in patients with multiple myeloma
-
1:CAS:528:DC%2BD1cXhsVylt7fO 18691255
-
KF Wader UM Fagerli RU Holt, et al. 2008 Elevated serum concentrations of activated hepatocyte growth factor activator in patients with multiple myeloma Eur J Haematol 81 380 383 1:CAS:528:DC%2BD1cXhsVylt7fO 18691255
-
(2008)
Eur J Haematol
, vol.81
, pp. 380-383
-
-
Wader, K.F.1
Fagerli, U.M.2
Holt, R.U.3
-
29
-
-
0021261075
-
Plasma sex hormone-binding globulin levels decrease during the second decade of life irrespective of pubertal status
-
1:STN:280:DyaL2c7mt1Glsw%3D%3D 10.1210/jcem-58-5-915 6538579
-
SK Cunningham T Loughlin M Culliton, et al. 1984 Plasma sex hormone-binding globulin levels decrease during the second decade of life irrespective of pubertal status J Clin Endocrinol Metab 58 915 918 1:STN:280:DyaL2c7mt1Glsw%3D%3D 10.1210/jcem-58-5-915 6538579
-
(1984)
J Clin Endocrinol Metab
, vol.58
, pp. 915-918
-
-
Cunningham, S.K.1
Loughlin, T.2
Culliton, M.3
-
30
-
-
0036082534
-
Heritability of plasma renin activity and plasma concentration of angiotensinogen and angiotensin-converting enzyme
-
DOI 10.1038/sj.jhh.1001410
-
WJ Vinck RH Fagard R Vlietinck, et al. 2002 Heritability of plasma renin activity and plasma concentration of angiotensinogen and angiotensin-converting enzyme J Hum Hypertens 16 417 422 1:CAS:528:DC%2BD38XltVKitLY%3D 10.1038/sj.jhh.1001410 12037697 (Pubitemid 34685590)
-
(2002)
Journal of Human Hypertension
, vol.16
, Issue.6
, pp. 417-422
-
-
Vinck, W.J.1
Fagard, R.H.2
Vlietinck, R.3
Lijnen, P.4
|