-
1
-
-
0036665581
-
Quantitative profiling of proteins in complex mixtures using liquid chromatography and mass spectrometry
-
Chelius, D.; Bondarenko, P. V. Quantitative profiling of proteins in complex mixtures using liquid chromatography and mass spectrometry. J. Proteome Res. 2002, 1 (4), 317-323.
-
(2002)
J. Proteome Res
, vol.1
, Issue.4
, pp. 317-323
-
-
Chelius, D.1
Bondarenko, P.V.2
-
2
-
-
10744233766
-
Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards
-
Wang, W.; Zhou, H.; Un, H.; Roy, S.; Shaler, T. A.; Hill, L. R.; Norton, S.; Kumar, P.; Anderle, M.; Becker, C. H. Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards. Anal. Chem. 2003, 75 (18), 4818-4826.
-
(2003)
Anal. Chem
, vol.75
, Issue.18
, pp. 4818-4826
-
-
Wang, W.1
Zhou, H.2
Un, H.3
Roy, S.4
Shaler, T.A.5
Hill, L.R.6
Norton, S.7
Kumar, P.8
Anderle, M.9
Becker, C.H.10
-
3
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu, H.; Sadygov, R. G.; Yates, J. R., III. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal. Chem. 2004, 76 (14), 4193-4201.
-
(2004)
Anal. Chem
, vol.76
, Issue.14
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates III, J.R.3
-
4
-
-
33646564676
-
Label-free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes
-
Wang, G.; Wu, W. W.; Zeng, W.; Chou, C. L.; Shen, R. F. Label-free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes. J. Proteome Res. 2006, 5 (5), 1214-1223.
-
(2006)
J. Proteome Res
, vol.5
, Issue.5
, pp. 1214-1223
-
-
Wang, G.1
Wu, W.W.2
Zeng, W.3
Chou, C.L.4
Shen, R.F.5
-
5
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
Gygi, S. P.; Rist, B.; Gerber, S. A.; Turecek, F.; Gelb, M. H.; Aebersold, R, Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 1999, 17 (10), 994-999.
-
(1999)
Nat. Biotechnol
, vol.17
, Issue.10
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
6
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross, P. L.; Huang, Y. N.; Marchese, J. N.; Williamson, B.; Parker, K.; Hattan, S.; Khainovski, N.; Pillai, S.; Dey, S.; Daniels, S.; Purkayastha, S.; Juhasz, P.; Martin, S.; Bartlet-Jones, M.; He, F.; Jacobson, A.; Pappin, D. J. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell. Proteomics 2004, 3 (12), 1154-1169.
-
(2004)
Mol Cell. Proteomics
, vol.3
, Issue.12
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
7
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong, S. E.; Blagoev, B.; Kratchmarova, I.; Kristensen, D. B.; Steen, H.; Pandey, A.; Mann, M. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 2002, 1 (5), 376-386.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, Issue.5
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
8
-
-
33845329203
-
Functional and quantitative proteomics using SILAC
-
Mann, M. Functional and quantitative proteomics using SILAC. Nat. Rev. Mol. Cell. Biol. 2006, 7 (12), 952-958.
-
(2006)
Nat. Rev. Mol. Cell. Biol
, vol.7
, Issue.12
, pp. 952-958
-
-
Mann, M.1
-
9
-
-
0035384687
-
Proteolytic 180 labeling for comparative proteomics: Model studies with two serotypes of adenovirus
-
Yao, X.; Freas, A.; Ramirez, J.; Demirev, P. A.; Fenselau, C. Proteolytic 180 labeling for comparative proteomics: model studies with two serotypes of adenovirus. Anal Chem. 2001, 73 (13), 2836- 2842.
-
(2001)
Anal Chem
, vol.73
, Issue.13
, pp. 2836-2842
-
-
Yao, X.1
Freas, A.2
Ramirez, J.3
Demirev, P.A.4
Fenselau, C.5
-
11
-
-
34848889259
-
The Paragon Algorithm: A next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
Shilov, I. V.; Seymour, S. L.; Patel, A. A.; Loboda, A.; Tang, W. H.; Keating, S. P.; Hunter, C. L.; Nuwaysir, L. M.; Schaeffer, D. A. The Paragon Algorithm: A next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol. Cell. Proteomics 2007, 6 (9), 1638-1655.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.9
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
Hunter, C.L.7
Nuwaysir, L.M.8
Schaeffer, D.A.9
-
12
-
-
33747409456
-
Detection of biomarkers with a multiplex quantitative proteomic platform in cerebrospinal fluid of patients with neurodegenerative disorders
-
Abdi, F.; Quinn, J. F.; Jankovic, J.; Mcintosh, M.; Leverenz, J. B.; Peskind, E.; Nixon, R.; Nutt, J.; Chung, K.; Zabetian, C.; Samii, A.; Lin, M.; Hattan, S.; Pan, C.; Wang, Y.; Jin, J.; Zhu, D.; Li, G. J.; Liu, Y.; Waichunas, D.; Montine, T. J.; Zhang, J. Detection of biomarkers with a multiplex quantitative proteomic platform in cerebrospinal fluid of patients with neurodegenerative disorders. J. Alzheimers Dis. 2006, 9 (3), 293-348.
-
(2006)
J. Alzheimers Dis
, vol.9
, Issue.3
, pp. 293-348
-
-
Abdi, F.1
Quinn, J.F.2
Jankovic, J.3
Mcintosh, M.4
Leverenz, J.B.5
Peskind, E.6
Nixon, R.7
Nutt, J.8
Chung, K.9
Zabetian, C.10
Samii, A.11
Lin, M.12
Hattan, S.13
Pan, C.14
Wang, Y.15
Jin, J.16
Zhu, D.17
Li, G.J.18
Liu, Y.19
Waichunas, D.20
Montine, T.J.21
Zhang, J.22
more..
-
13
-
-
33646590920
-
Differential protein expression profiling by 1THAQ-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype
-
Keshamouni, V. G.; Michailidis, G.; Grasso, C. S.; Anthwal, S.; Strahler, J. R.; Walker, A.; Arenberg, D. A.; Reddy, R. C.; Akulapalli, S.; Thannickal, V. J.; Standiford, T. J.; Andrews, P. C.; Omenn, G. S. Differential protein expression profiling by 1THAQ-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype. J. Proteome Res. 2006, 5 (5), 1143-1154.
-
(2006)
J. Proteome Res
, vol.5
, Issue.5
, pp. 1143-1154
-
-
Keshamouni, V.G.1
Michailidis, G.2
Grasso, C.S.3
Anthwal, S.4
Strahler, J.R.5
Walker, A.6
Arenberg, D.A.7
Reddy, R.C.8
Akulapalli, S.9
Thannickal, V.J.10
Standiford, T.J.11
Andrews, P.C.12
Omenn, G.S.13
-
14
-
-
17444383113
-
Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and cICAT with multidimensional liquid chromatography and tandem mass spectrometry
-
DeSouza, L.; Diehl, G.; Rodrigues, M. J.; Guo, J.; Romaschin, A. D.; Colgan, T. J.; Siu, K. W. Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and cICAT with multidimensional liquid chromatography and tandem mass spectrometry. J. Proteome Res. 2005, 4 (2), 377-386.
-
(2005)
J. Proteome Res
, vol.4
, Issue.2
, pp. 377-386
-
-
DeSouza, L.1
Diehl, G.2
Rodrigues, M.J.3
Guo, J.4
Romaschin, A.D.5
Colgan, T.J.6
Siu, K.W.7
-
15
-
-
33644845960
-
Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF
-
Wu, W. W.; Wang, G.; Baek, S. J.; Shen, R. F. Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. J. Proteome Res. 2006, 5 (3), 651-658.
-
(2006)
J. Proteome Res
, vol.5
, Issue.3
, pp. 651-658
-
-
Wu, W.W.1
Wang, G.2
Baek, S.J.3
Shen, R.F.4
-
16
-
-
33847340190
-
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
-
Gan, C. S.; Chong, P. K.; Pham, T. K.; Wright, P. C. Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ). J. Proteome Res. 2007, 6 (2), 821-827.
-
(2007)
J. Proteome Res
, vol.6
, Issue.2
, pp. 821-827
-
-
Gan, C.S.1
Chong, P.K.2
Pham, T.K.3
Wright, P.C.4
-
17
-
-
34249310279
-
Proteomic approaches for serum biomarker discovery in cancer
-
3A, 1247-1255
-
aurya, P.; Meleady, P.; Dowling, P.; Clynes, M. Proteomic approaches for serum biomarker discovery in cancer. Anticancer Res. 2007, 27 (3A), 1247-1255.
-
(2007)
Anticancer Res
, vol.27
-
-
aurya, P.1
Meleady, P.2
Dowling, P.3
Clynes, M.4
-
18
-
-
0001644020
-
The human plasma proteome: History, character, and diagnostic prospects
-
Anderson, N. L.; Anderson, N. G. The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell. Proteomics 2002, 1 (11), 845-867.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, Issue.11
, pp. 845-867
-
-
Anderson, N.L.1
Anderson, N.G.2
-
19
-
-
0004119676
-
-
Oxford University Press: New York
-
Motulsky, H. Intuitive Biostatistics, Oxford University Press: New York, 1995; pp 195-204.
-
(1995)
Intuitive Biostatistics
, pp. 195-204
-
-
Motulsky, H.1
-
20
-
-
0032892697
-
Composition of the peptide fraction in human blood plasma: Database of circulating human peptides
-
Richter, R.; Schulz-Knappe, P.; Schrader, M.; Standker, L.; Jurgens, M.; Tammen, H.; Forssmann, W. G. Composition of the peptide fraction in human blood plasma: database of circulating human peptides. J. Chromatogr., B: Biomed. Sci. Appl. 1999, 726 (1-2), 25-35.
-
(1999)
J. Chromatogr., B: Biomed. Sci. Appl
, vol.726
, Issue.1-2
, pp. 25-35
-
-
Richter, R.1
Schulz-Knappe, P.2
Schrader, M.3
Standker, L.4
Jurgens, M.5
Tammen, H.6
Forssmann, W.G.7
-
21
-
-
0346364695
-
Characterization of the low molecular weight human serum proteome
-
Tirumalai, R. S.; Chan, K. C.; Prieto, D. A.; Issaq, H. J.; Conrads, T. P.; Veenstra, T. D. Characterization of the low molecular weight human serum proteome. Mol. Cell. Proteomics 2003, 2 (10), 1096- 1103.
-
(2003)
Mol. Cell. Proteomics
, vol.2
, Issue.10
, pp. 1096-1103
-
-
Tirumalai, R.S.1
Chan, K.C.2
Prieto, D.A.3
Issaq, H.J.4
Conrads, T.P.5
Veenstra, T.D.6
-
22
-
-
34249315396
-
Inhibition of intrinsic proteolytic activities moderates preanalytical variability and instability of human plasma
-
Yi, J.; Kim, C.; Gelfand, C. A. Inhibition of intrinsic proteolytic activities moderates preanalytical variability and instability of human plasma. J. Proteome Res. 2007, 6 (5), 1768-1781.
-
(2007)
J. Proteome Res
, vol.6
, Issue.5
, pp. 1768-1781
-
-
Yi, J.1
Kim, C.2
Gelfand, C.A.3
-
23
-
-
43849113605
-
Eight-channel iTRAQ enables comparison of the activity of 6 leukaemogenic tyrosine kinases
-
Pierce, A.; Unwin, R. D.; Evans, C. A.; Griffiths, S.; Carney, L.; Zhang, L.; Jaworska, E.; Lee, C. F.; Blinco, D.; Okoniewski, M. J.; Miller, C. J.; Bitton, D. A.; Spooncer, E.; Whetton, A. D. Eight-channel iTRAQ enables comparison of the activity of 6 leukaemogenic tyrosine kinases. Mol. Cell. Proteomics 2008, 7 (5), 853-863.
-
(2008)
Mol. Cell. Proteomics
, vol.7
, Issue.5
, pp. 853-863
-
-
Pierce, A.1
Unwin, R.D.2
Evans, C.A.3
Griffiths, S.4
Carney, L.5
Zhang, L.6
Jaworska, E.7
Lee, C.F.8
Blinco, D.9
Okoniewski, M.J.10
Miller, C.J.11
Bitton, D.A.12
Spooncer, E.13
Whetton, A.D.14
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