-
1
-
-
0034118493
-
Inference of population structure using multilocus genotypic data
-
10835412
-
Inference of population structure using multilocus genotypic data. JK Pritchard M Stephens P Donnelly, Genetics 2000 155 2 945 959 10835412
-
(2000)
Genetics
, vol.155
, Issue.2
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
2
-
-
0037147189
-
Genetic structure of human populations
-
10.1126/science.1078311. 12493913
-
Genetic structure of human populations. NA Rosenberg JK Pritchard JL Weber HM Cann KK Kidd LA Zhivotovsky MW Feldman, Science 2002 298 5602 2381 2385 10.1126/science.1078311 12493913
-
(2002)
Science
, vol.298
, Issue.5602
, pp. 2381-2385
-
-
Rosenberg, N.A.1
Pritchard, J.K.2
Weber, J.L.3
Cann, H.M.4
Kidd, K.K.5
Zhivotovsky, L.A.6
Feldman, M.W.7
-
3
-
-
0034759330
-
Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds
-
11606545
-
Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds. NA Rosenberg T Bruke K Elo MW Feldman PJ Freidlin MA Groenen J Hillel A Maki-Tanila M Tixier-Bochard A Vignal K Wimmersh S Weigend, Genetics 2001 159 2 699 713 11606545
-
(2001)
Genetics
, vol.159
, Issue.2
, pp. 699-713
-
-
Rosenberg, N.A.1
Bruke, T.2
Elo, K.3
Feldman, M.W.4
Freidlin, P.J.5
Groenen, M.A.6
Hillel, J.7
Maki-Tanila, A.8
Tixier-Bochard, M.9
Vignal, A.10
Wimmersh, K.11
Weigend, S.12
-
4
-
-
0000023841
-
Population structure and process in evolution
-
Springer-Verlag, Berlin Wohrmann K, Jain SK
-
Population structure and process in evolution. N Barton A Clark, Population biology: ecological and evolutionary viewpoints Springer-Verlag, Berlin, Wohrmann K, Jain SK, 1990 115 173
-
(1990)
Population Biology: Ecological and Evolutionary Viewpoints
, pp. 115-173
-
-
Barton, N.1
Clark, A.2
-
5
-
-
0002147424
-
Gene flow and population structure
-
Princeton, NJ: Princeton Univ. Press Real LA
-
Gene flow and population structure. M Slatkin, Ecological genetics Princeton, NJ: Princeton Univ. Press, Real LA, 1994 3 17
-
(1994)
Ecological Genetics
, pp. 3-17
-
-
Slatkin, M.1
-
6
-
-
0034798786
-
Variability and genetic structure of plant virus populations
-
10.1146/annurev.phyto.39.1.157. 11701863
-
Variability and genetic structure of plant virus populations. F Garcia-Arenal A Fraile JM Malpica, Annu Rev Phytopathol 2001 39 157 186 10.1146/annurev.phyto.39.1.157 11701863
-
(2001)
Annu Rev Phytopathol
, vol.39
, pp. 157-186
-
-
Garcia-Arenal, F.1
Fraile, A.2
Malpica, J.M.3
-
7
-
-
35648933507
-
Viral evolution in the genomic age
-
10.1371/journal.pbio.0050278. 17914905
-
Viral evolution in the genomic age. EC Holmes, PLoS Biol 2007 5 10 278 10.1371/journal.pbio.0050278 17914905
-
(2007)
PLoS Biol
, vol.5
, Issue.10
, pp. 5278
-
-
Holmes, E.C.1
-
8
-
-
0034544688
-
Cotton leaf curl disease
-
10.1016/S0168-1702(00)00195-7. 11137169
-
Cotton leaf curl disease. RW Briddon PG Markham, Virus Res 2000 71 151 159 10.1016/S0168-1702(00)00195-7 11137169
-
(2000)
Virus Res
, vol.71
, pp. 151-159
-
-
Briddon, R.W.1
Markham, P.G.2
-
9
-
-
0002793132
-
The status of Bemisia tabaci (Genn.) as a pest and vector in world agroecosystems
-
The status of Bemisia tabaci (Genn.) as a pest and vector in world agroecosystems. JK Brown, FAO Plant Prot Bull 1994 42 3 32
-
(1994)
FAO Plant Prot Bull
, vol.42
, pp. 3-32
-
-
Brown, J.K.1
-
10
-
-
0001684732
-
Whitefly-transmitted geminiviruses and associated disorders in the Americas and the Caribbean basin
-
10.1094/PD-76-0220
-
Whitefly-transmitted geminiviruses and associated disorders in the Americas and the Caribbean basin. JK Brown J Bird, Plant Dis 1992 76 220 225 10.1094/PD-76-0220
-
(1992)
Plant Dis
, vol.76
, pp. 220-225
-
-
Brown, J.K.1
Bird, J.2
-
11
-
-
0035088846
-
The emergence and dissemination of white-fly transmitted geminiviruses in Latin America
-
10.1007/s007050170153. 11338381
-
The emergence and dissemination of white-fly transmitted geminiviruses in Latin America. FJ Morales PK Anderson, Arch Virol 2001 146 415 441 10.1007/s007050170153 11338381
-
(2001)
Arch Virol
, vol.146
, pp. 415-441
-
-
Morales, F.J.1
Anderson, P.K.2
-
12
-
-
0034538147
-
Tomato yellow leaf curl virus, an emerging virus complex causing epidemics worldwide
-
10.1016/S0168-1702(00)00193-3. 11137167
-
Tomato yellow leaf curl virus, an emerging virus complex causing epidemics worldwide. E Moriones J Navas-Castillo, Virus Res 2000 71 123 134 10.1016/S0168-1702(00)00193-3 11137167
-
(2000)
Virus Res
, vol.71
, pp. 123-134
-
-
Moriones, E.1
Navas-Castillo, J.2
-
13
-
-
0030700760
-
The emergence of whitefly-transmitted geminiviruses in tomato in the western hemisphere
-
10.1094/PDIS.1997.81.12.1358
-
The emergence of whitefly-transmitted geminiviruses in tomato in the western hemisphere. JE Polston PK Anderson, Plant Dis 1997 81 1358 1369 10.1094/PDIS.1997.81.12.1358
-
(1997)
Plant Dis
, vol.81
, pp. 1358-1369
-
-
Polston, J.E.1
Anderson, P.K.2
-
14
-
-
0001718785
-
First report of a tomato yellow leaf curl-like geminivirus in the Western Hemisphere
-
10.1094/PD-78-0831B
-
First report of a tomato yellow leaf curl-like geminivirus in the Western Hemisphere. JE Polston D Bois CA Serra S Concepcion, Plant Dis 1994 78 831 10.1094/PD-78-0831B
-
(1994)
Plant Dis
, vol.78
, pp. 831
-
-
Polston, J.E.1
Bois, D.2
Serra, C.A.3
Concepcion, S.4
-
15
-
-
0037905791
-
Emerging geminivirus problems: A serious threat to crop production
-
10.1111/j.1744-7348.2003.tb00240.x
-
Emerging geminivirus problems: A serious threat to crop production. A Varma VG Malathi, Ann Appl Biol 2003 142 145 164 10.1111/j.1744-7348.2003. tb00240.x
-
(2003)
Ann Appl Biol
, vol.142
, pp. 145-164
-
-
Varma, A.1
Malathi, V.G.2
-
16
-
-
0001875135
-
Advances in geminivirus research
-
10.1146/annurev.py.23.090185.000415
-
Advances in geminivirus research. BD Harrison, Annu Rev Phytopathol 1985 23 55 82 10.1146/annurev.py.23.090185.000415
-
(1985)
Annu Rev Phytopathol
, vol.23
, pp. 55-82
-
-
Harrison, B.D.1
-
17
-
-
25444482704
-
Revising the way we conceive and name viruses below the species level: A review of geminivirus taxonomy calls for new standardized isolate descriptors
-
10.1007/s00705-005-0583-0. 16132185
-
Revising the way we conceive and name viruses below the species level: a review of geminivirus taxonomy calls for new standardized isolate descriptors. CM Fauquet J Stanley, Arch Virol 2005 150 2151 2179 10.1007/s00705-005-0583-0 16132185
-
(2005)
Arch Virol
, vol.150
, pp. 2151-2179
-
-
Fauquet, C.M.1
Stanley, J.2
-
18
-
-
0037323252
-
Revision of taxonomic criteria for species demarcation in the family Geminiviridae, and an updated list of begomovirus species
-
10.1007/s00705-002-0957-5. 12557003
-
Revision of taxonomic criteria for species demarcation in the family Geminiviridae, and an updated list of begomovirus species. CM Fauquet DM Bisaro RW Briddon JK Brown BD Harrison EP Rybicki DC Stenger J Stanley, Arch Virol 2003 148 405 421 10.1007/s00705-002-0957-5 12557003
-
(2003)
Arch Virol
, vol.148
, pp. 405-421
-
-
Fauquet, C.M.1
Bisaro, D.M.2
Briddon, R.W.3
Brown, J.K.4
Harrison, B.D.5
Rybicki, E.P.6
Stenger, D.C.7
Stanley, J.8
-
19
-
-
43349106661
-
Geminivirus strain demarcation and nomenclature
-
10.1007/s00705-008-0037-6. 18256781
-
Geminivirus strain demarcation and nomenclature. CM Fauquet RW Briddon JK Brown E Moriones J Stanley M Zerbini X Zhou, Arch Virol 2008 153 783 821 10.1007/s00705-008-0037-6 18256781
-
(2008)
Arch Virol
, vol.153
, pp. 783-821
-
-
Fauquet, C.M.1
Briddon, R.W.2
Brown, J.K.3
Moriones, E.4
Stanley, J.5
Zerbini, M.6
Zhou, X.7
-
20
-
-
0037905789
-
Geminivirus classification and nomenclature: Progress and problems
-
10.1111/j.1744-7348.2003.tb00241.x
-
Geminivirus classification and nomenclature: progress and problems. CM Fauquet J Stanley, Ann Appl Biol 2003 142 165 189 10.1111/j.1744-7348.2003. tb00241.x
-
(2003)
Ann Appl Biol
, vol.142
, pp. 165-189
-
-
Fauquet, C.M.1
Stanley, J.2
-
21
-
-
1842664146
-
Begomoviruses from mungbeans in Pakistan: Epitope profiles, DNA A sequences and phylogenetic relationships
-
10.1007/s00705-003-0256-9. 15045567
-
Begomoviruses from mungbeans in Pakistan: Epitope profiles, DNA A sequences and phylogenetic relationships. S Hameed DJ Robinson, Arch Virol 2004 149 809 819 10.1007/s00705-003-0256-9 15045567
-
(2004)
Arch Virol
, vol.149
, pp. 809-819
-
-
Hameed, S.1
Robinson, D.J.2
-
22
-
-
0033590220
-
Possible emergence of new geminivirus by frequent recombination
-
10.1006/viro.1999.0056. 10600594
-
Possible emergence of new geminivirus by frequent recombination. M Padidam S Sawyer CM Fauquet, Virology 1999 265 218 225 10.1006/viro.1999.0056 10600594
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
23
-
-
18144380966
-
South West Indian Ocean islands tomato begomovirus populations represent a new major monopartite begomovirus group
-
10.1099/vir.0.80805-0. 15831967
-
South West Indian Ocean islands tomato begomovirus populations represent a new major monopartite begomovirus group. H Delatte DP Martin F Naze R Goldbach B Reynaud M Peterschmitt JM Lett, J Gen Virol 2005 86 1533 1542 10.1099/vir.0.80805-0 15831967
-
(2005)
J Gen Virol
, vol.86
, pp. 1533-1542
-
-
Delatte, H.1
Martin, D.P.2
Naze, F.3
Goldbach, R.4
Reynaud, B.5
Peterschmitt, M.6
Lett, J.M.7
-
24
-
-
33745279559
-
Begomovirus genetic diversity in the native plant reservoir Solanum nigrum: Evidence for the presence of a new virus species of recombinant nature
-
10.1016/j.virol.2006.02.028. 16580040
-
Begomovirus genetic diversity in the native plant reservoir Solanum nigrum: evidence for the presence of a new virus species of recombinant nature. S Garcia-Andres F Monci J Navas-Castillo E Moriones, Virology 2006 350 433 442 10.1016/j.virol.2006.02.028 16580040
-
(2006)
Virology
, vol.350
, pp. 433-442
-
-
Garcia-Andres, S.1
Monci, F.2
Navas-Castillo, J.3
Moriones, E.4
-
25
-
-
33847014211
-
Founder effect, plant host, and recombination shape emergent population of begomoviruses that cause the tomato yellow leaf curl disease in the Mediterranean basin
-
10.1016/j.virol.2006.09.030. 17070885
-
Founder effect, plant host, and recombination shape emergent population of begomoviruses that cause the tomato yellow leaf curl disease in the Mediterranean basin. S Garcia-Andres GP Accotto J Navas-Castillo E Moriones, Virology 2007 359 302 312 10.1016/j.virol.2006.09.030 17070885
-
(2007)
Virology
, vol.359
, pp. 302-312
-
-
Garcia-Andres, S.1
Accotto, G.P.2
Navas-Castillo, J.3
Moriones, E.4
-
26
-
-
36749074393
-
Begomovirus 'melting pot' in the south-west Indian Ocean islands: Molecular diversity and evolution through recombination
-
10.1099/vir.0.83252-0. 18024917
-
Begomovirus 'melting pot' in the south-west Indian Ocean islands: molecular diversity and evolution through recombination. P Lefeuvre DP Martin M Hoareau F Naze H Delatte M Thierry A Varsani N Becker B Reynaud JM Lett, J Gen Virol 2007 88 3458 3468 10.1099/vir.0.83252-0 18024917
-
(2007)
J Gen Virol
, vol.88
, pp. 3458-3468
-
-
Lefeuvre, P.1
Martin, D.P.2
Hoareau, M.3
Naze, F.4
Delatte, H.5
Thierry, M.6
Varsani, A.7
Becker, N.8
Reynaud, B.9
Lett, J.M.10
-
27
-
-
37749033183
-
Detection and frequency of recombination in tomato-infecting begomoviruses of South and Southeast Asia
-
10.1186/1743-422X-4-111. 17963488
-
Detection and frequency of recombination in tomato-infecting begomoviruses of South and Southeast Asia. HC Prasanna M Rai, Virol J 2007 4 111 10.1186/1743-422X-4-111 17963488
-
(2007)
Virol J
, vol.4
, pp. 111
-
-
Prasanna, H.C.1
Rai, M.2
-
28
-
-
0037223888
-
The evolutionary genomics of pathogen recombination
-
10.1038/nrg964. 12509753
-
The evolutionary genomics of pathogen recombination. P Awadalla, Nat Rev Genet 2003 4 50 60 10.1038/nrg964 12509753
-
(2003)
Nat Rev Genet
, vol.4
, pp. 50-60
-
-
Awadalla, P.1
-
29
-
-
38949097786
-
A bias in ML estimates of branch lengths in the presence of multiple signals
-
10.1093/molbev/msm263. 18048399
-
A bias in ML estimates of branch lengths in the presence of multiple signals. D Penny WT White MD Hendy MJ Phillips, Mol Biol Evol 2007 25 239 242 10.1093/molbev/msm263 18048399
-
(2007)
Mol Biol Evol
, vol.25
, pp. 239-242
-
-
Penny, D.1
White, W.T.2
Hendy, M.D.3
Phillips, M.J.4
-
30
-
-
0036183042
-
The effect of recombination on the accuracy of phylogeny estimation
-
11847565
-
The effect of recombination on the accuracy of phylogeny estimation. D Posada KA Crandall, J Mol Evol 2002 54 396 402 11847565
-
(2002)
J Mol Evol
, vol.54
, pp. 396-402
-
-
Posada, D.1
Crandall, K.A.2
-
31
-
-
0037423837
-
Traces of human migrations in Helicobacter pylori populations
-
10.1126/science.1080857. 12624269
-
Traces of human migrations in Helicobacter pylori populations. D Falush T Wirth B Linz JK Pritchard M Stephens M Kidd MJ Blaser DY Graham S Vacher GI Perez-Perez Y Yamaoka F Megraud K Oto U Reichard E Katzowitsch X Wang M Actman S Suerbaum, Science 2003 299 1582 1585 10.1126/science.1080857 12624269
-
(2003)
Science
, vol.299
, pp. 1582-1585
-
-
Falush, D.1
Wirth, T.2
Linz, B.3
Pritchard, J.K.4
Stephens, M.5
Kidd, M.6
Blaser, M.J.7
Graham, D.Y.8
Vacher, S.9
Perez-Perez, G.I.10
Yamaoka, Y.11
Megraud, F.12
Oto, K.13
Reichard, U.14
Katzowitsch, E.15
Wang, X.16
Actman, M.17
Suerbaum, S.18
-
32
-
-
36248952586
-
The population genomics of hepatitis B virus
-
10.1111/j.1365-294X.2007.03564.x. 18028177
-
The population genomics of hepatitis B virus. C Szmaragd F Balloux, Mol Ecol 2007 16 4747 4758 10.1111/j.1365-294X.2007.03564.x 18028177
-
(2007)
Mol Ecol
, vol.16
, pp. 4747-4758
-
-
Szmaragd, C.1
Balloux, F.2
-
33
-
-
0026512283
-
A statistical test for detecting population subdivision
-
1552836
-
A statistical test for detecting population subdivision. R Hudson DD Boos NL Kaplan, Mol Biol Evol 1992 9 138 151 1552836
-
(1992)
Mol Biol Evol
, vol.9
, pp. 138-151
-
-
Hudson, R.1
Boos, D.D.2
Kaplan, N.L.3
-
34
-
-
27544472675
-
Use of autosomal loci for clustering individuals and populations of East Asian origin
-
10.1007/s00439-005-1334-8. 16028061
-
Use of autosomal loci for clustering individuals and populations of East Asian origin. JJ Kim P Verdu AJ Pakstis WC Speed JR Kidd KK Kidd, Hum Genet 2005 117 511 519 10.1007/s00439-005-1334-8 16028061
-
(2005)
Hum Genet
, vol.117
, pp. 511-519
-
-
Kim, J.J.1
Verdu, P.2
Pakstis, A.J.3
Speed, W.C.4
Kidd, J.R.5
Kidd, K.K.6
-
35
-
-
32444444695
-
Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci
-
10.1007/s00439-005-0106-9. 16315063
-
Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci. SL Li T Yamamoto T Yoshimoto R Uchihi M Mizutani Y Kurimoto K Tokunaga F Jin Y Katsumata N Saitou, Hum Genet 2006 118 695 707 10.1007/s00439-005-0106-9 16315063
-
(2006)
Hum Genet
, vol.118
, pp. 695-707
-
-
Li, S.L.1
Yamamoto, T.2
Yoshimoto, T.3
Uchihi, R.4
Mizutani, M.5
Kurimoto, Y.6
Tokunaga, K.7
Jin, F.8
Katsumata, Y.9
Saitou, N.10
-
36
-
-
17444386263
-
Genetic structure and diversity in Oryza Sativa L
-
10.1534/genetics.104.035642. 15654106
-
Genetic structure and diversity in Oryza Sativa L. AJ Garris TH Tai J Coburn S Kresovich S McCouch, Genetics 2005 169 1631 1638 10.1534/genetics.104. 035642 15654106
-
(2005)
Genetics
, vol.169
, pp. 1631-1638
-
-
Garris, A.J.1
Tai, T.H.2
Coburn, J.3
Kresovich, S.4
McCouch, S.5
-
37
-
-
33645017202
-
Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation
-
10.1111/j.1365-294X.2006.02854.x
-
Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation. Y Kuroda A Kaga N Tomooka DA Vaughan, Mol Ecol 2006 I5 4 959 974 10.1111/j.1365-294X.2006.02854.x
-
(2006)
Mol Ecol
, vol.5
, Issue.4
, pp. 959-974
-
-
Kuroda, Y.1
Kaga, A.2
Tomooka, N.3
Vaughan, D.A.4
-
38
-
-
1942517863
-
Assumed and inferred spatial structure of populations: The Scandinavian brown bears revisited
-
10.1111/j.1365-294X.2004.02074.x. 15078468
-
Assumed and inferred spatial structure of populations: the Scandinavian brown bears revisited. S Manel E Bellemain JE Swenson O Francois, Mol Ecol 2004 13 5 1327 1331 10.1111/j.1365-294X.2004.02074.x 15078468
-
(2004)
Mol Ecol
, vol.13
, Issue.5
, pp. 1327-1331
-
-
Manel, S.1
Bellemain, E.2
Swenson, J.E.3
Francois, O.4
-
39
-
-
45549091822
-
Population structure of the genes encoding Plasmodium falciparum apical membrane antigen 1: Implications for vaccine design
-
10.1073/pnas.0802328105. 18515425
-
Population structure of the genes encoding Plasmodium falciparum apical membrane antigen 1: Implications for vaccine design. J Duan J Mu MA Thera D Joy SL Kosakovsky Pond D Diemert C Long H Zhou K Miura A Ouattara A Dolo O Doumbo X Su L Miller, Proc Natl Acad Sci USA 2008 105 22 7857 7862 10.1073/pnas. 0802328105 18515425
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.22
, pp. 7857-7862
-
-
Duan, J.1
Mu, J.2
Thera, M.A.3
Joy, D.4
Kosakovsky Pond, S.L.5
Diemert, D.6
Long, C.7
Zhou, H.8
Miura, K.9
Ouattara, A.10
Dolo, A.11
Doumbo, O.12
Su, X.13
Miller, L.14
-
40
-
-
77950627327
-
Geminate particle morphology of sweet potato leaf curl virus in partially purified preparation and its serological relationship to two begomoviruses by western blotting
-
10.1007/PL00012942
-
Geminate particle morphology of sweet potato leaf curl virus in partially purified preparation and its serological relationship to two begomoviruses by western blotting. M Onuki Y Honda K Hanada, J Gen Plant Pathol 2000 66 182 184 10.1007/PL00012942
-
(2000)
J Gen Plant Pathol
, vol.66
, pp. 182-184
-
-
Onuki, M.1
Honda, Y.2
Hanada, K.3
-
41
-
-
34447641960
-
Occurrence of Sweet potato leaf curl virus in Sicily
-
DOI 10.1111/j.1365-3059.2005.01273.x
-
Occurrence of sweet potato leaf curl virus in Sicily. RW Briddon SE Bull ID Bedford, Plant Pathology 2006 55 286 10.1111/j.1365-3059.2005.01273.x (Pubitemid 351209343)
-
(2006)
Plant Pathology
, vol.55
, Issue.2
, pp. 286
-
-
Briddon, R.W.1
Bull, S.E.2
Bedford, I.D.3
-
42
-
-
0031452827
-
Ipomoea crinkle leaf curl caused by a whitefly-transmitted Gemini-like virus
-
10.1111/j.1744-7348.1997.tb05156.x
-
Ipomoea crinkle leaf curl caused by a whitefly-transmitted Gemini-like virus. J Cohen M Milgram Y Antignus M Pearlsman O Lachman G Loebenstein, Ann Appl Biol 1997 131 273 282 10.1111/j.1744-7348.1997.tb05156.x
-
(1997)
Ann Appl Biol
, vol.131
, pp. 273-282
-
-
Cohen, J.1
Milgram, M.2
Antignus, Y.3
Pearlsman, M.4
Lachman, O.5
Loebenstein, G.6
-
43
-
-
0343193772
-
Cloning of a DNA A-like component of sweet potato leaf curl virus: Nucleotide sequence and phylogenetic relationships
-
http://www.bspp.org.uk/mppol/abstract/0422lotr.htm
-
Cloning of a DNA A-like component of sweet potato leaf curl virus: nucleotide sequence and phylogenetic relationships. P Lotrakul RA Valverde, Mol Plant Path 1999 http://www.bspp.org.uk/mppol/abstract/0422lotr.htm"[http:// www.bspp.org.uk/mppol/abstract/0422lotr.htm]
-
(1999)
Mol Plant Path
-
-
Lotrakul, P.1
Valverde, R.A.2
-
44
-
-
70350491083
-
Novel begomovirus species of recombinant nature in sweet potato (Ipomea batatas) and Ipomea indica: Taxonomic and phylogenetic implications
-
10.1099/vir.0.012542-0. 19515824
-
Novel begomovirus species of recombinant nature in sweet potato (Ipomea batatas) and Ipomea indica: taxonomic and phylogenetic implications. G Lozano HP Trenado RA Valverde J Navas-Castillo, J Gen Virol 2009 90 2550 2562 10.1099/vir.0.012542-0 19515824
-
(2009)
J Gen Virol
, vol.90
, pp. 2550-2562
-
-
Lozano, G.1
Trenado, H.P.2
Valverde, R.A.3
Navas-Castillo, J.4
-
45
-
-
34447645165
-
Molecular characterisation of sweet potato leaf curl virus isolate from China (SPLCV-CN) and its phylogenetic relationship with other members of the Geminiviridae
-
10.1007/s11262-007-0084-1. 17318425
-
Molecular characterisation of sweet potato leaf curl virus isolate from China (SPLCV-CN) and its phylogenetic relationship with other members of the Geminiviridae. YS Luan J Zhang DM Liu WL Li, Virus Genes 2007 35 379 385 10.1007/s11262-007-0084-1 17318425
-
(2007)
Virus Genes
, vol.35
, pp. 379-385
-
-
Luan, Y.S.1
Zhang, J.2
Liu, D.M.3
Li, W.L.4
-
46
-
-
37349086780
-
Avoidance of protein fold disruption in natural virus recombinants
-
10.1371/journal.ppat.0030181. 18052529
-
Avoidance of protein fold disruption in natural virus recombinants. P Lefeuvre JM Lett B Reynaud DP Martin, PLoS Pathog 2007 3 181 10.1371/journal.ppat.0030181 18052529
-
(2007)
PLoS Pathog
, vol.3
, pp. 5181
-
-
Lefeuvre, P.1
Lett, J.M.2
Reynaud, B.3
Martin, D.P.4
-
47
-
-
33747626399
-
The evolutionary value of recombination in constrained by genome modularity
-
10.1371/journal.pgen.0010051. 16244707
-
The evolutionary value of recombination in constrained by genome modularity. DP Martin E Vander Walt D Posada EP Rybicki, PLoS Genet 2005 1 51 10.1371/journal.pgen.0010051 16244707
-
(2005)
PLoS Genet
, vol.1
, pp. 551
-
-
Martin, D.P.1
Vander Walt, E.2
Posada, D.3
Rybicki, E.P.4
-
48
-
-
19444372534
-
Molecular biodiversity of cassava begomoviruses in Tanzania: Evolution of cassava geminiviruses in Africa and evidence for East Africa being a center of diversity of cassava geminiviruses
-
DOI 10.1186/1743-422X-2-21
-
Molecular biodiversity of cassava begomoviruses in Tanzania: evolution of cassava geminiviruses in Africa and evidence for East Africa being a center of diversity of cassava geminiviruses. J Ndunguru JP Legg TA Aveling G Thompson CM Fauquet, Virol J 2005 2 21 10.1186/1743-422X-2-21 (Pubitemid 40727399)
-
(2005)
Virology Journal
, vol.2
, pp. 21
-
-
Ndunguru, J.1
Legg, J.P.2
Aveling, T.A.S.3
Thompson, G.4
Fauquet, C.M.5
-
49
-
-
0036843031
-
Evidence for population growth in humans is confounded by fine-scale population structure
-
10.1016/S0168-9525(02)02781-6. 12414185
-
Evidence for population growth in humans is confounded by fine-scale population structure. SE Ptak M Przeworski, Trends Genet 2002 18 559 563 10.1016/S0168-9525(02)02781-6 12414185
-
(2002)
Trends Genet
, vol.18
, pp. 559-563
-
-
Ptak, S.E.1
Przeworski, M.2
-
50
-
-
0036078962
-
Co-adaptation between cassava mosaic geminivirus and their local vector population
-
10.1016/S0168-1702(02)00051-5. 12076831
-
Co-adaptation between cassava mosaic geminivirus and their local vector population. MN Maruthi J Colvin SE Seal G Gibson J Cooper, Virus Res 2002 86 71 85 10.1016/S0168-1702(02)00051-5 12076831
-
(2002)
Virus Res
, vol.86
, pp. 71-85
-
-
Maruthi, M.N.1
Colvin, J.2
Seal, S.E.3
Gibson, G.4
Cooper, J.5
-
51
-
-
0033945179
-
Insect transmission of plant viruses: A constraint on virus variability
-
DOI 10.1016/S1369-5266(00)00090-X
-
Insect transmission of plant viruses, a constraint on virus variability. AG Power, Curr Opin Plant Biol 2000 3 360 340 10.1016/S1369-5266(00)00090-X (Pubitemid 30437874)
-
(2000)
Current Opinion in Plant Biology
, vol.3
, Issue.4
, pp. 336-340
-
-
Power, A.G.1
-
53
-
-
0344631626
-
Displacement of tomato yellow leaf curl virus (TYLCV)-Sr by TYLCV-Is in tomato epidemics in Spain
-
Displacement of tomato yellow leaf curl virus (TYLCV)-Sr by TYLCV-Is in tomato epidemics in Spain. S Sanchez-Campos J Navas-Castillo R Camero C Soria JA Diaz E Moriones, Phytopathology 1999 89 1038 1043 10.1094/PHYTO.1999.89.11.1038 18944659 (Pubitemid 29514854)
-
(1999)
Phytopathology
, vol.89
, Issue.11
, pp. 1038-1043
-
-
Sanchez-Campos, S.1
Navas-Castillo, J.2
Camero, R.3
Soria, C.4
Diaz, J.A.5
Moriones, E.6
-
54
-
-
7044226474
-
Dual begomovirus infections and high Bemisia tabaci populations: Two factors driving the spread of a cassava mosaic disease pandemic
-
10.1111/j.0032-0862.2004.01062.x
-
Dual begomovirus infections and high Bemisia tabaci populations: Two factors driving the spread of a cassava mosaic disease pandemic. J Colvin CA Omongo MN Maruthi GW Otium-Nape JM Thresh, Plant Pathol 2004 53 577 584 10.1111/j.0032-0862.2004.01062.x
-
(2004)
Plant Pathol
, vol.53
, pp. 577-584
-
-
Colvin, J.1
Omongo, C.A.2
Maruthi, M.N.3
Otium-Nape, G.W.4
Thresh, J.M.5
-
55
-
-
18144451799
-
Variation and evolution of plant virus populations
-
DOI 10.1007/s10123-003-0142-z
-
Variation and evolution of plant virus populations. F Garcia-Arenal A Fraile JM Malpica, Intl Microbiol 2003 6 225 232 10.1007/s10123-003-0142-z (Pubitemid 37524234)
-
(2003)
International Microbiology
, vol.6
, Issue.4
, pp. 225-232
-
-
Garcia-Arenal, F.1
Fraile, A.2
Malpica, J.M.3
-
56
-
-
30344462984
-
Factors influencing begomovirus evolution and their increasing global significance: Implications for sustainable control
-
DOI 10.1080/07352680500365257, PII M4425PX83172N43W
-
Factors influencing begomovirus evolution and their increasing global significance: implications for sustainable control. SE Seal F Vandenbosch MJ Jeger, Crit Rev Plant Sci 2006 25 23 46 10.1080/07352680500365257 (Pubitemid 43068153)
-
(2006)
Critical Reviews in Plant Sciences
, vol.25
, Issue.1
, pp. 23-46
-
-
Seal, S.E.1
VandenBosch, F.2
Jeger, M.J.3
-
57
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
-
10.1093/nar/22.22.4673. 7984417
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. JD Thompson DG Higgins TJ Gibson, Nucleic Acids Res 1994 22 4673 4680 10.1093/nar/22.22.4673 7984417
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
58
-
-
0033664744
-
LIAN 3.0: Detecting linkage disequilibrium in multilocus data. Linkage analysis
-
10.1093/bioinformatics/16.9.847. 11108709
-
LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage analysis. B Haubold RR Hudson, Bioinformatics 2000 16 847 848 10.1093/bioinformatics/16.9.847 11108709
-
(2000)
Bioinformatics
, vol.16
, pp. 847-848
-
-
Haubold, B.1
Hudson, R.R.2
-
59
-
-
0026743963
-
Hierarchical analysis of linkage disequilibrium in Rhizobium populations: Evidence for sex?
-
10.1073/pnas.89.17.8389. 1518873
-
Hierarchical analysis of linkage disequilibrium in Rhizobium populations: evidence for sex? V Souza TT Nguyen RR Hudson D Pinero RE Lenski, Proc Natl Acad Sci USA 1992 89 8389 8393 10.1073/pnas.89.17.8389 1518873
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 8389-8393
-
-
Souza, V.1
Nguyen, T.T.2
Hudson, R.R.3
Pinero, D.4
Lenski, R.E.5
-
60
-
-
0002907949
-
The interaction of selection and linkage. I. General considerations: Heterotic models
-
17248194
-
The interaction of selection and linkage. I. General considerations: heterotic models. RC Lewontin, Genetics 1964 49 49 67 17248194
-
(1964)
Genetics
, vol.49
, pp. 49-67
-
-
Lewontin, R.C.1
-
61
-
-
33646226097
-
Linkage disequilibrium in finite populations
-
10.1007/BF01245622
-
Linkage disequilibrium in finite populations. WG Hill A Robertson, Theor Appl Genet 1968 38 226 231 10.1007/BF01245622
-
(1968)
Theor Appl Genet
, vol.38
, pp. 226-231
-
-
Hill, W.G.1
Robertson, A.2
-
62
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by coalescent and other methods
-
10.1093/bioinformatics/btg359. 14668244
-
DnaSP, DNA polymorphism analyses by coalescent and other methods. J Rozas JC Sanchez-Delbarrio X Messegeuer R Rozas, Bioinformatics 2003 19 2496 2497 10.1093/bioinformatics/btg359 14668244
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-Delbarrio, J.C.2
Messegeuer, X.3
Rozas, R.4
-
64
-
-
21244479740
-
Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
-
10.1111/j.1365-294X.2005.02553.x. 15969739
-
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. G Evanno S Regnaut J Goudet, Mol Ecol 2005 14 2611 2620 10.1111/j.1365-294X.2005.02553.x 15969739
-
(2005)
Mol Ecol
, vol.14
, pp. 2611-2620
-
-
Evanno, G.1
Regnaut, S.2
Goudet, J.3
-
65
-
-
85007110786
-
ARLEQUIN Ver. 3.0: An integrated software package for population genetics data analysis
-
19325852
-
ARLEQUIN Ver. 3.0: an integrated software package for population genetics data analysis. L Excoffier G Laval S Schneider, Evol Bioinform Online 2005 1 47 50 19325852
-
(2005)
Evol Bioinform Online
, vol.1
, pp. 47-50
-
-
Excoffier, L.1
Laval, G.2
Schneider, S.3
-
66
-
-
0026681074
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
-
1644282
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. L Excoffier P Smouse J Quattro, Genetics 1992 131 479 491 1644282
-
(1992)
Genetics
, vol.131
, pp. 479-491
-
-
Excoffier, L.1
Smouse, P.2
Quattro, J.3
-
67
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
10.2307/2408641
-
Estimating F-statistics for the analysis of population structure. BS Weir CC Cockerham, Evolution 1984 38 1358 1370 10.2307/2408641
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
|