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Volumn 49, Issue 5, 2010, Pages 688-702

Genetic structure of Hylarana erythraea (Amphibia: Anura: Ranidae) from Malaysia

Author keywords

Hylarana erythraea; mtDNA CO1; Population expansion; Population subdivision

Indexed keywords

AMPHIBIA; ANURA; RANA ERYTHRAEA; RANIDAE;

EID: 77957127798     PISSN: 10215506     EISSN: 1810522X     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (28)

References (48)
  • 1
    • 74049112075 scopus 로고
    • Observation on the life history and ecology of Rana erythraea Schlegel, on Negros Island, Philippines
    • Alcala AC. 1955. Observation on the life history and ecology of Rana erythraea Schlegel, on Negros Island, Philippines. Siliman J. 2: 175-192.
    • (1955) Siliman J , vol.2 , pp. 175-192
    • Alcala, A.C.1
  • 2
    • 0036008419 scopus 로고    scopus 로고
    • Nested clade analysis & the genetic evidence for population expansion in the phylogeography of the golden-striped salamander, Chioglossa lusitanica (Amphibia: Urodela)
    • Alexandrino J, JW Jarntzen, N Ferrand. 2002. Nested clade analysis & the genetic evidence for population expansion in the phylogeography of the golden-striped salamander, Chioglossa lusitanica (Amphibia: Urodela). Heredity 88: 66-74.
    • (2002) Heredity , vol.88 , pp. 66-74
    • Alexandrino, J.1    Jarntzen, J.W.2    Ferrand, N.3
  • 3
    • 0027066517 scopus 로고
    • Comparisons of structure among mixed dipterocarp forests of north-western Borneo
    • Ashton PS, P Hall. 1992. Comparisons of structure among mixed dipterocarp forests of north-western Borneo. J. Ecol. 80: 459-481.
    • (1992) J. Ecol , vol.80 , pp. 459-481
    • Ashton, P.S.1    Hall, P.2
  • 4
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecifc phylogenies. Mol. Biol
    • Bandelt HJ, P Forster, A Röhl. 1999. Median-joining networks for inferring intraspecifc phylogenies. Mol. Biol. Evol. 16: 37-48.
    • (1999) Evol , vol.16 , pp. 37-48
    • Bandelt, H.J.1    Forster, P.2    Röhl, A.3
  • 5
    • 0035205972 scopus 로고    scopus 로고
    • A test of the genetic species concept: Cytochrome-b sequences and mammals
    • Bradley RD, RJ Baker. 2001. A test of the genetic species concept: cytochrome-b sequences and mammals. J. Mammal. 82: 960-973.
    • (2001) J. Mammal , vol.82 , pp. 960-973
    • Bradley, R.D.1    Baker, R.J.2
  • 6
    • 0001226018 scopus 로고
    • Population ecology of the frog Rana erythraea in southern Negros, Philippines
    • Brown WC, AC Alcala. 1970. Population ecology of the frog Rana erythraea in southern Negros, Philippines. Copeia 1970: 611-622.
    • (1970) Copeia , vol.1970 , pp. 611-622
    • Brown, W.C.1    Alcala, A.C.2
  • 7
    • 0034936430 scopus 로고    scopus 로고
    • Evidence for recent population expansion in the evolutionary history of the malaria vectors Anopheles arabiensis and Anopheles gambiae
    • Donnelly MJ, MC Licht, T Lehmann. 2001. Evidence for recent population expansion in the evolutionary history of the malaria vectors Anopheles arabiensis and Anopheles gambiae. Mol. Biol. Evol. 18: 1353-1364.
    • (2001) Mol. Biol. Evol , vol.18 , pp. 1353-1364
    • Donnelly, M.J.1    Licht, M.C.2    Lehmann, T.3
  • 8
    • 72549106277 scopus 로고    scopus 로고
    • Mitochondrial DNA diversity of Tor tambroides Valenciennes (Cyprinidae) from fve natural populations in Malaysia
    • Esa Y, SS Siraj, SK Daud, KAA Rahim, JJ Ryan, SG Tan. 2008. Mitochondrial DNA diversity of Tor tambroides Valenciennes (Cyprinidae) from fve natural populations in Malaysia. Zool. Stud. 47: 360-367.
    • (2008) Zool. Stud , vol.47 , pp. 360-367
    • Esa, Y.1    Siraj, S.S.2    Daud, S.K.3    Rahim, K.A.A.4    Ryan, J.J.5    Tan, S.G.6
  • 9
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin vers. 3.0: An integrated software package for population genetics data analysis
    • Excoffer L, G Laval, S Schneider. 2005. Arlequin vers. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50.
    • (2005) Evol. Bioinform. Online , vol.1 , pp. 47-50
    • Excoffer, L.1    Laval, G.2    Schneider, S.3
  • 10
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu YX. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915-925.
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.X.1
  • 11
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood
    • Guindon S, O Gascuel. 2003. A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systemat. Biol. 52: 696-704.
    • (2003) Systemat. Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 12
    • 1842486672 scopus 로고    scopus 로고
    • The origin of malaria: Mixed messages from genetic diversity
    • Hartl DL. 2004. The origin of malaria: mixed messages from genetic diversity. Nat. Rev. Microb. 2: 15-22.
    • (2004) Nat. Rev. Microb , vol.2 , pp. 15-22
    • Hartl, D.L.1
  • 13
    • 0022376704 scopus 로고
    • Dating the human-ape split by a molecular clock of mitochondrial DNA
    • Hasegawa M, H Kishino, T Yano. 1985. Dating the human-ape split by a molecular clock of mitochondrial DNA. J. Mol, Evol. 22: 160-174.
    • (1985) J. Mol, Evol , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 15
    • 0026709389 scopus 로고
    • Estimation of levels of gene fow from DNA sequence data
    • Hudson RR, M Slatkin, WP Maddison. 1992. Estimation of levels of gene fow from DNA sequence data. Genetics 132: 583-589.
    • (1992) Genetics , vol.132 , pp. 583-589
    • Hudson, R.R.1    Slatkin, M.2    Maddison, W.P.3
  • 16
    • 12044255023 scopus 로고
    • Success of phylogenetic methods in the four taxon case
    • Huelsenbeck J P, JE Hill. 1993. Success of phylogenetic methods in the four taxon case. Systemat. Biol. 42: 247-264.
    • (1993) Systemat. Biol , vol.42 , pp. 247-264
    • Huelsenbeck, J.P.1    Hill, J.E.2
  • 17
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, FR Ronquist. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.R.2
  • 19
    • 0001917342 scopus 로고
    • The annual reproductive pattern of the frog Rana erythraea in Sarawak
    • Inger RF, B Greenberg. 1963. The annual reproductive pattern of the frog Rana erythraea in Sarawak. Physiol. Zool. 36: 21-33.
    • (1963) Physiol. Zool , vol.36 , pp. 21-33
    • Inger, R.F.1    Greenberg, B.2
  • 20
    • 58149350281 scopus 로고    scopus 로고
    • Systematics of a widespread Southeast Asian frog, Rana chalconota (Amphibia: Anura: Ranidae)
    • Inger RF, BL Stuart, DT Iskandar. 2009. Systematics of a widespread Southeast Asian frog, Rana chalconota (Amphibia: Anura: Ranidae). Zool. J. Linn. Soc. 155: 123-147.
    • (2009) Zool. J. Linn. Soc , vol.155 , pp. 123-147
    • Inger, R.F.1    Stuart, B.L.2    Iskandar, D.T.3
  • 21
    • 0003764566 scopus 로고    scopus 로고
    • 2nd ed. Kota Kinabalu, Sabah Malaysia: Natural History Publications (Borneo)
    • Inger RF, RB Stuebing. 2005. A field guide to the frogs of Borneo. 2nd ed. Kota Kinabalu, Sabah Malaysia: Natural History Publications (Borneo), pp. 1-200.
    • (2005) A Field Guide to The Frogs of Borneo , pp. 1-200
    • Inger, R.F.1    Stuebing, R.B.2
  • 22
  • 23
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
    • Kumar S, J Dudley, M Nei, K Tamura. 2008. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brie. Bioinform. 9: 299-306.
    • (2008) Brie. Bioinform , vol.9 , pp. 299-306
    • Kumar, S.1    Dudley, J.2    Nei, M.3    Tamura, K.4
  • 24
    • 0036005516 scopus 로고    scopus 로고
    • Molecular systematics of the eastern fence lizard (Sceloporus undulatus): A comparison of parsimony, likelihood, and Bayesian approaches
    • Leache AD, TW Reeder. 2002. Molecular systematics of the eastern fence lizard (Sceloporus undulatus): a comparison of parsimony, likelihood, and Bayesian approaches. Systemat. Biol. 51: 44-68.
    • (2002) Systemat. Biol , vol.51 , pp. 44-68
    • Leache, A.D.1    Reeder, T.W.2
  • 25
    • 77957144133 scopus 로고    scopus 로고
    • Speciation and phylogeography of Opsariichthys bidens (Pisces: Cypriniformes: Cyprinidae) in China: Analysis of the cytochrome b gene of mtDNA from diverse populations
    • Li GY, XZ Wang, YH Zhao, J Zhang, CG Zhang, SP He. 2009. Speciation and phylogeography of Opsariichthys bidens (Pisces: Cypriniformes: Cyprinidae) in China: analysis of the cytochrome b gene of mtDNA from diverse populations. Zool. Stud. 48: 569-583.
    • (2009) Zool. Stud , vol.48 , pp. 569-583
    • Li, G.Y.1    Wang, X.Z.2    Zhao, Y.H.3    Zhang, J.4    Zhang, C.G.5    He, S.P.6
  • 26
    • 0025289181 scopus 로고
    • The analysis of population survey data on DNA sequence variation
    • Lynch M, TJ Crease. 1990. The analysis of population survey data on DNA sequence variation. Mol. Biol. Evol. 7: 377-394.
    • (1990) Mol. Biol. Evol , vol.7 , pp. 377-394
    • Lynch, M.1    Crease, T.J.2
  • 29
    • 0014054519 scopus 로고
    • The detection of disease clustering & a generalized regression approach
    • Mantel N. 1967. The detection of disease clustering & a generalized regression approach. Cancer Res. 27: 209-220.
    • (1967) Cancer Res , vol.27 , pp. 209-220
    • Mantel, N.1
  • 30
    • 27744506959 scopus 로고    scopus 로고
    • Multiple invasions of the Ryukyu Archipelago by Oriental frogs of the subgenus Odorrana with phylogenetic reassessment of the related subgenera of the genus Rana
    • Matsui M, T Shimada, H Ota, T Tanaka-Ueno. 2005. Multiple invasions of the Ryukyu Archipelago by Oriental frogs of the subgenus Odorrana with phylogenetic reassessment of the related subgenera of the genus Rana. Mol. Phylogenet. Evol. 37: 733-742.
    • (2005) Mol. Phylogenet. Evol , vol.37 , pp. 733-742
    • Matsui, M.1    Shimada, T.2    Ota, H.3    Tanaka-Ueno, T.4
  • 31
    • 77957116258 scopus 로고
    • Die Amphibian und Reptilien der Deutschen Limnologischen Sunda Expedition
    • B and 12 Trop. Bimmenwaser
    • Mertens R. 1934. Die Amphibian und Reptilien der Deutschen Limnologischen Sunda Expedition. Arch. Hydrobiol. Suppl. Band 12 Trop. Bimmenwaser 4: 667-701.
    • (1934) Arch. Hydrobiol. , vol.4 , Issue.SUPPL. , pp. 667-701
    • Mertens, R.1
  • 33
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: Phylogenetic model averaging. molecular biology and evolution
    • Posada D. 2008. jModelTest: phylogenetic model averaging. molecular biology and evolution. Mol. Biol. Evol. 25: 1253-1256.
    • (2008) Mol. Biol. Evol , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 34
    • 0038814763 scopus 로고    scopus 로고
    • Habitat patterns in tropical rain forests: A comparison of 105 plots in Northwest Borneo
    • Potts MD, PS Ashton, LS Kaufman, JB Plotkin. 2002. Habitat patterns in tropical rain forests: a comparison of 105 plots in Northwest Borneo. Ecology 83: 2782-2797.
    • (2002) Ecology , vol.83 , pp. 2782-2797
    • Potts, M.D.1    Ashton, P.S.2    Kaufman, L.S.3    Plotkin, J.B.4
  • 35
    • 0037227366 scopus 로고    scopus 로고
    • Intra-deme molecular diversity in spatially expanding populations
    • Ray N, M Currat, L Excoffier. 2003. Intra-deme molecular diversity in spatially expanding populations. Mol. Biol. Evol. 20: 76-86.
    • (2003) Mol. Biol. Evol , vol.20 , pp. 76-86
    • Ray, N.1    Currat, M.2    Excoffier, L.3
  • 37
    • 0029818407 scopus 로고    scopus 로고
    • Probability distribution of molecular evolution trees: A new method of phylogenetic inference
    • Rannala B, Z Yang. 1996. Probability distribution of molecular evolution trees: a new method of phylogenetic inference. J. Mol. Evol. 43: 304-311.
    • (1996) J. Mol. Evol , vol.43 , pp. 304-311
    • Rannala, B.1    Yang, Z.2
  • 38
    • 0003281483 scopus 로고    scopus 로고
    • Historical biogeography of Spatholobus (Leguminosae-Papilionioideae) and allies in SE Asia
    • R Hall, D Holloway, eds., Leiden, the Netherlands: Ackhuys Publishers
    • Ridder-Numan JWA. 1998. Historical biogeography of Spatholobus (Leguminosae-Papilionioideae) and allies in SE Asia. In R Hall, D Holloway, eds. Biogeography and geological evolution of SE Asia. Leiden, the Netherlands: Ackhuys Publishers, pp. 259-277.
    • (1998) Biogeography and Geological Evolution of SE Asia , pp. 259-277
    • Ridder-Numan, J.W.A.1
  • 39
    • 0000621581 scopus 로고
    • Genetic evidence for a Pleistocene population explosion
    • Rogers AR. 1995. Genetic evidence for a Pleistocene population explosion. Evolution 49: 608-615.
    • (1995) Evolution , vol.49 , pp. 608-615
    • Rogers, A.R.1
  • 40
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers AR, H Harpending. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 9: 552-569.
    • (1992) Mol. Biol. Evol , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 41
    • 0030960257 scopus 로고    scopus 로고
    • DnaSP vers. 2.0: A novel software package for extensive molecular population genetics analysis
    • Rozas J, R Rozas. 1997. DnaSP vers. 2.0: a novel software package for extensive molecular population genetics analysis. Comput. Appl. Biosci. 13: 307-311.
    • (1997) Comput. Appl. Biosci , vol.13 , pp. 307-311
    • Rozas, J.1    Rozas, R.2
  • 43
    • 0025951996 scopus 로고
    • Pairwise comparisons of mitochondrial DNA sequences in stable & exponentially growing populations
    • Slatkin M, RR Hudson. 1991. Pairwise comparisons of mitochondrial DNA sequences in stable & exponentially growing populations. Genetics 129: 555-562.
    • (1991) Genetics , vol.129 , pp. 555-562
    • Slatkin, M.1    Hudson, R.R.2
  • 44
    • 33748638817 scopus 로고    scopus 로고
    • High level of cryptic species diversity revealed by sympatric lineages of Southeast Asian forest frogs
    • Stuart BL, RF Inger, HK Voris. 2006. High level of cryptic species diversity revealed by sympatric lineages of Southeast Asian forest frogs. Biol. Lett. 2: 470-474.
    • (2006) Biol. Lett , vol.2 , pp. 470-474
    • Stuart, B.L.1    Inger, R.F.2    Voris, H.K.3
  • 46
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24: 4876-4882
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 47
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 48
    • 0005931462 scopus 로고    scopus 로고
    • Patterns of plant endemism and rarity in Borneo and the Malay Peninsula
    • CI Peng, PP Lowry II, eds., Taipei, Taiwan: Institute of Botany, Academia Sinica Monograph Series 16
    • Wong KM. 1998. Patterns of plant endemism and rarity in Borneo and the Malay Peninsula. In CI Peng, PP Lowry II, eds. Rare, threatened, and endangered foras of Asia and the Pacific rim. Taipei, Taiwan: Institute of Botany, Academia Sinica Monograph Series 16, pp. 139-169.
    • (1998) Rare, Threatened, and Endangered Foras of Asia and The Pacific Rim , pp. 139-169
    • Wong, K.M.1


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