메뉴 건너뛰기




Volumn 11, Issue 1, 2010, Pages

SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PROTEIN FLP; PROTEIN GGDEF; SIALIC ACID; UNCLASSIFIED DRUG;

EID: 77956907264     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-11-512     Document Type: Article
Times cited : (45)

References (84)
  • 1
    • 15944429289 scopus 로고    scopus 로고
    • Molecular Pathogenesis of Vibrio vulnificus
    • Gulig PA, Bourdage KL, Starks AM. Molecular Pathogenesis of Vibrio vulnificus. J Microbiol 2005, 43:118-131.
    • (2005) J Microbiol , vol.43 , pp. 118-131
    • Gulig, P.A.1    Bourdage, K.L.2    Starks, A.M.3
  • 2
    • 65449185894 scopus 로고    scopus 로고
    • Vibrio vulnificus: Disease and pathogenesis
    • 10.1128/IAI.01046-08, 2681776, 19255188
    • Oliver JD, Jones MK. Vibrio vulnificus: Disease and pathogenesis. Infect Immun 2009, 77:1723-1733. 10.1128/IAI.01046-08, 2681776, 19255188.
    • (2009) Infect Immun , vol.77 , pp. 1723-1733
    • Oliver, J.D.1    Jones, M.K.2
  • 3
    • 0023116740 scopus 로고
    • Correlation between virulence and colony morphology in Vibrio vulnificus
    • 260315, 2432016
    • Simpson LM, White VK, Zane SF, Oliver JD. Correlation between virulence and colony morphology in Vibrio vulnificus. Infect Immun 1987, 55:269-272. 260315, 2432016.
    • (1987) Infect Immun , vol.55 , pp. 269-272
    • Simpson, L.M.1    White, V.K.2    Zane, S.F.3    Oliver, J.D.4
  • 4
    • 0025290788 scopus 로고
    • Phenotypic evaluation of acapsular transposon mutants of Vibrio vulnificus
    • 258721, 2160432
    • Wright AC, Simpson LM, Oliver JD, Morris JG. Phenotypic evaluation of acapsular transposon mutants of Vibrio vulnificus. Infect Immun 1990, 58:1769-1773. 258721, 2160432.
    • (1990) Infect Immun , vol.58 , pp. 1769-1773
    • Wright, A.C.1    Simpson, L.M.2    Oliver, J.D.3    Morris, J.G.4
  • 5
    • 34447260073 scopus 로고    scopus 로고
    • The HlyU protein is a positive regulator of rtxA1, a gene responsible for cytotoxicity and virulence in the human pathogen Vibrio vulnificus
    • 10.1128/IAI.00045-07, 1932941, 17438022
    • Liu M, Alice AF, Naka H, Crosa JH. The HlyU protein is a positive regulator of rtxA1, a gene responsible for cytotoxicity and virulence in the human pathogen Vibrio vulnificus. Infect Immun 2007, 75:3282-3289. 10.1128/IAI.00045-07, 1932941, 17438022.
    • (2007) Infect Immun , vol.75 , pp. 3282-3289
    • Liu, M.1    Alice, A.F.2    Naka, H.3    Crosa, J.H.4
  • 6
    • 34248208219 scopus 로고    scopus 로고
    • Identification and characterization of the Vibrio vulnificus rtxA essential for cytotoxicity in vitro and virulence in mice
    • Lee JH, Kim MW, Kim BS, Kim SM, Lee BC, Kim TS, Choi SH. Identification and characterization of the Vibrio vulnificus rtxA essential for cytotoxicity in vitro and virulence in mice. J Microbiol 2007, 45:146-152.
    • (2007) J Microbiol , vol.45 , pp. 146-152
    • Lee, J.H.1    Kim, M.W.2    Kim, B.S.3    Kim, S.M.4    Lee, B.C.5    Kim, T.S.6    Choi, S.H.7
  • 7
    • 40749157602 scopus 로고    scopus 로고
    • Vibrio vulnificus RTX toxin kills host cells only after contact of the bacteria with host cells
    • 10.1111/j.1462-5822.2007.01088.x, 18005241
    • Kim YR, Lee SE, Kook H, Yeom JA, Na HS, Kim SY, Chung SS, Choy HE, Rhee JH. Vibrio vulnificus RTX toxin kills host cells only after contact of the bacteria with host cells. Cell Microbiol 2008, 10:848-862. 10.1111/j.1462-5822.2007.01088.x, 18005241.
    • (2008) Cell Microbiol , vol.10 , pp. 848-862
    • Kim, Y.R.1    Lee, S.E.2    Kook, H.3    Yeom, J.A.4    Na, H.S.5    Kim, S.Y.6    Chung, S.S.7    Choy, H.E.8    Rhee, J.H.9
  • 8
    • 0030012953 scopus 로고    scopus 로고
    • Role of catechol siderophore synthesis in Vibrio vulnificus virulence
    • 174150, 8698519
    • Litwin CM, Rayback TW, Skinner J. Role of catechol siderophore synthesis in Vibrio vulnificus virulence. Infect Immun 1996, 64:2834-2838. 174150, 8698519.
    • (1996) Infect Immun , vol.64 , pp. 2834-2838
    • Litwin, C.M.1    Rayback, T.W.2    Skinner, J.3
  • 9
    • 0019840322 scopus 로고
    • Role of iron in the pathogenesis of Vibrio vulnificus infections
    • 350895, 7309236
    • Wright AC, Simpson LM, Oliver JD. Role of iron in the pathogenesis of Vibrio vulnificus infections. Infect Immun 1981, 34:503-507. 350895, 7309236.
    • (1981) Infect Immun , vol.34 , pp. 503-507
    • Wright, A.C.1    Simpson, L.M.2    Oliver, J.D.3
  • 10
    • 15544368041 scopus 로고    scopus 로고
    • A Vibrio vulnificus type IV pilin contributes to biofilm formation, adherence to epithelial cells, and virulence
    • 10.1128/IAI.73.3.1411-1422.2005, 1064924, 15731039
    • Paranjpye RN, Strom MS. A Vibrio vulnificus type IV pilin contributes to biofilm formation, adherence to epithelial cells, and virulence. Infect Immun 2005, 73:1411-1422. 10.1128/IAI.73.3.1411-1422.2005, 1064924, 15731039.
    • (2005) Infect Immun , vol.73 , pp. 1411-1422
    • Paranjpye, R.N.1    Strom, M.S.2
  • 11
    • 0031741393 scopus 로고    scopus 로고
    • The type IV leader peptidase/N-methyltransferase of Vibrio vulnificus controls factors required for adherence to HEp-2 cells and virulence in iron-overloaded mice
    • 108715, 9826339
    • Paranjpye RN, Lara JC, Pepe JC, Pepe CM, Strom MS. The type IV leader peptidase/N-methyltransferase of Vibrio vulnificus controls factors required for adherence to HEp-2 cells and virulence in iron-overloaded mice. Infect Immun 1998, 66:5659-5668. 108715, 9826339.
    • (1998) Infect Immun , vol.66 , pp. 5659-5668
    • Paranjpye, R.N.1    Lara, J.C.2    Pepe, J.C.3    Pepe, C.M.4    Strom, M.S.5
  • 12
    • 0037414463 scopus 로고    scopus 로고
    • Flagellar basal body flg operon as a virulence determinant of Vibrio vulnificus
    • 10.1016/S0006-291X(03)00613-2, 12711330
    • Kim YR, Rhee JH. Flagellar basal body flg operon as a virulence determinant of Vibrio vulnificus. Biochem Biophys Res Commun 2003, 304:405-410. 10.1016/S0006-291X(03)00613-2, 12711330.
    • (2003) Biochem Biophys Res Commun , vol.304 , pp. 405-410
    • Kim, Y.R.1    Rhee, J.H.2
  • 13
    • 3342927580 scopus 로고    scopus 로고
    • Role of flagellum and motility in pathogenesis of Vibrio vulnificus
    • 10.1128/IAI.72.8.4905-4910.2004, 470688, 15271959
    • Lee JH, Rho JB, Park KJ, Kim CB, Han YS, Choi SH, Lee KH, Park SJ. Role of flagellum and motility in pathogenesis of Vibrio vulnificus. Infect Immun 2004, 72:4905-4910. 10.1128/IAI.72.8.4905-4910.2004, 470688, 15271959.
    • (2004) Infect Immun , vol.72 , pp. 4905-4910
    • Lee, J.H.1    Rho, J.B.2    Park, K.J.3    Kim, C.B.4    Han, Y.S.5    Choi, S.H.6    Lee, K.H.7    Park, S.J.8
  • 15
    • 0033598652 scopus 로고    scopus 로고
    • Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel. Israel Vibrio Study Group
    • 10.1016/S0140-6736(99)02471-X, 10543668
    • Bisharat N, Agmon V, Finkelstein R, Raz R, Ben Dror G, Lerner L, Soboh S, Colodner R, Cameron DN, Wykstra DL, Swerdlow DL, Farmer JJ. Clinical, epidemiological, and microbiological features of Vibrio vulnificus biogroup 3 causing outbreaks of wound infection and bacteraemia in Israel. Israel Vibrio Study Group. Lancet 1999, 354:1421-1424. 10.1016/S0140-6736(99)02471-X, 10543668.
    • (1999) Lancet , vol.354 , pp. 1421-1424
    • Bisharat, N.1    Agmon, V.2    Finkelstein, R.3    Raz, R.4    Ben Dror, G.5    Lerner, L.6    Soboh, S.7    Colodner, R.8    Cameron, D.N.9    Wykstra, D.L.10    Swerdlow, D.L.11    Farmer, J.J.12
  • 16
    • 0037234695 scopus 로고    scopus 로고
    • Sequence polymorphism of the 16 S rRNA gene of Vibrio vulnificus is a possible indicator of strain virulence
    • 10.1128/JCM.41.1.442-446.2003, 149629, 12517889
    • Nilsson WB, Paranjpye RN, DePaola A, Strom MS. Sequence polymorphism of the 16 S rRNA gene of Vibrio vulnificus is a possible indicator of strain virulence. J Clin Microbiol 2003, 41:442-446. 10.1128/JCM.41.1.442-446.2003, 149629, 12517889.
    • (2003) J Clin Microbiol , vol.41 , pp. 442-446
    • Nilsson, W.B.1    Paranjpye, R.N.2    DePaola, A.3    Strom, M.S.4
  • 17
    • 34948852834 scopus 로고    scopus 로고
    • Typing of Vibrio vulnificus strains by variability in their 16S-23 S rRNA intergenic spacer regions
    • 10.1089/fpd.2007.0005, 17883316
    • Gonzalez-Escalona N, Jaykus LA, DePaola A. Typing of Vibrio vulnificus strains by variability in their 16S-23 S rRNA intergenic spacer regions. Foodborne Pathog Dis 2007, 4:327-337. 10.1089/fpd.2007.0005, 17883316.
    • (2007) Foodborne Pathog Dis , vol.4 , pp. 327-337
    • Gonzalez-Escalona, N.1    Jaykus, L.A.2    DePaola, A.3
  • 19
    • 35449005658 scopus 로고    scopus 로고
    • The evolution of genetic structure in the marine pathogen, Vibrio vulnificus
    • 10.1016/j.meegid.2007.07.007, 17716955
    • Bisharat N, Cohen DI, Maiden MC, Crook DW, Peto T, Harding RM. The evolution of genetic structure in the marine pathogen, Vibrio vulnificus. Infect Genet Evol 2007, 7:685-693. 10.1016/j.meegid.2007.07.007, 17716955.
    • (2007) Infect Genet Evol , vol.7 , pp. 685-693
    • Bisharat, N.1    Cohen, D.I.2    Maiden, M.C.3    Crook, D.W.4    Peto, T.5    Harding, R.M.6
  • 20
    • 34548487133 scopus 로고    scopus 로고
    • Emergence of a virulent clade of Vibrio vulnificus and correlation with the presence of a 33-kilobase genomic island
    • 10.1128/AEM.00635-07, 2042058, 17616611
    • Cohen AL, Oliver JD, DePaola A, Feil EJ, Boyd EF. Emergence of a virulent clade of Vibrio vulnificus and correlation with the presence of a 33-kilobase genomic island. Appl Environ Microbiol 2007, 73:5553-5565. 10.1128/AEM.00635-07, 2042058, 17616611.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 5553-5565
    • Cohen, A.L.1    Oliver, J.D.2    DePaola, A.3    Feil, E.J.4    Boyd, E.F.5
  • 21
    • 18244401623 scopus 로고    scopus 로고
    • A rapid and simple PCR analysis indicates there are two subgroups of Vibrio vulnificus which correlate with clinical or environmental isolation
    • Rosche TM, Yano Y, Oliver JD. A rapid and simple PCR analysis indicates there are two subgroups of Vibrio vulnificus which correlate with clinical or environmental isolation. Microbiol Immunol 2005, 49:381-389.
    • (2005) Microbiol Immunol , vol.49 , pp. 381-389
    • Rosche, T.M.1    Yano, Y.2    Oliver, J.D.3
  • 22
    • 74549145564 scopus 로고    scopus 로고
    • Correlation of mannitol fermentation with virulence-associated genotypic characteristics in Vibrio vulnificus isolates from oysters and water samples in the Gulf of Mexico
    • 10.1089/fpd.2009.0362, 19785540
    • Drake SL, Whitney B, Levine JF, DePaola A, Jaykus LA. Correlation of mannitol fermentation with virulence-associated genotypic characteristics in Vibrio vulnificus isolates from oysters and water samples in the Gulf of Mexico. Foodborne Pathog Dis 2010, 7:97-101. 10.1089/fpd.2009.0362, 19785540.
    • (2010) Foodborne Pathog Dis , vol.7 , pp. 97-101
    • Drake, S.L.1    Whitney, B.2    Levine, J.F.3    DePaola, A.4    Jaykus, L.A.5
  • 23
    • 0033796597 scopus 로고    scopus 로고
    • Pathogenesis of infection by clinical and environmental strains of Vibrio vulnificus in iron dextran-treated mice
    • 10.1128/IAI.68.10.5785-5793.2000, 101538, 10992486
    • Starks AM, Schoeb TR, Tamplin ML, Parveen S, Doyle TJ, Bomeisl PE, Escudero GM, Gulig PA. Pathogenesis of infection by clinical and environmental strains of Vibrio vulnificus in iron dextran-treated mice. Infect Immun 2000, 68:5785-5793. 10.1128/IAI.68.10.5785-5793.2000, 101538, 10992486.
    • (2000) Infect Immun , vol.68 , pp. 5785-5793
    • Starks, A.M.1    Schoeb, T.R.2    Tamplin, M.L.3    Parveen, S.4    Doyle, T.J.5    Bomeisl, P.E.6    Escudero, G.M.7    Gulig, P.A.8
  • 24
    • 33748478588 scopus 로고    scopus 로고
    • Use of a marker plasmid to examine growth and death of Vibrio vulnificus in infected mice
    • 10.1111/j.1365-2958.2006.05227.x, 16856938
    • Starks AM, Bourdage KL, Thiaville PC, Gulig PA. Use of a marker plasmid to examine growth and death of Vibrio vulnificus in infected mice. Mol Microbiol 2006, 61:310-323. 10.1111/j.1365-2958.2006.05227.x, 16856938.
    • (2006) Mol Microbiol , vol.61 , pp. 310-323
    • Starks, A.M.1    Bourdage, K.L.2    Thiaville, P.C.3    Gulig, P.A.4
  • 25
    • 0037478989 scopus 로고    scopus 로고
    • Analysis of Vibrio vulnificus from market oysters and septicemia cases for virulence markers
    • 10.1128/AEM.69.7.4006-4011.2003, 165197, 12839775
    • DePaola A, Nordstrom JL, Dalsgaard A, Forslund A, Oliver JD, Bates T, Bourdage KL, Gulig PA. Analysis of Vibrio vulnificus from market oysters and septicemia cases for virulence markers. Appl Environ Microbiol 2003, 69:4006-4011. 10.1128/AEM.69.7.4006-4011.2003, 165197, 12839775.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 4006-4011
    • DePaola, A.1    Nordstrom, J.L.2    Dalsgaard, A.3    Forslund, A.4    Oliver, J.D.5    Bates, T.6    Bourdage, K.L.7    Gulig, P.A.8
  • 26
    • 0027230716 scopus 로고
    • Presence of a capsule in Vibrio vulnificus biotype 2 and its relationship to virulence for eels
    • 280742, 8478049
    • Biosca EG, Llorens H, Garay E, Amaro C. Presence of a capsule in Vibrio vulnificus biotype 2 and its relationship to virulence for eels. Infect Immun 1993, 61:1611-1618. 280742, 8478049.
    • (1993) Infect Immun , vol.61 , pp. 1611-1618
    • Biosca, E.G.1    Llorens, H.2    Garay, E.3    Amaro, C.4
  • 27
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • 10.1101/gr.078212.108, 2577856, 18714091
    • Li H, Ruan J, Durbin R. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res 2008, 18:1851-1858. 10.1101/gr.078212.108, 2577856, 18714091.
    • (2008) Genome Res , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 28
    • 39749085184 scopus 로고    scopus 로고
    • A common virulence plasmid in biotype 2 Vibrio vulnificus and its dissemination aided by a conjugal plasmid
    • 10.1128/JB.01484-07, 2258666, 18156267
    • Lee CT, Amaro C, Wu KM, Valiente E, Chang YF, Tsai SF, Chang CH, Hor LI. A common virulence plasmid in biotype 2 Vibrio vulnificus and its dissemination aided by a conjugal plasmid. J Bacteriol 2008, 190:1638-1648. 10.1128/JB.01484-07, 2258666, 18156267.
    • (2008) J Bacteriol , vol.190 , pp. 1638-1648
    • Lee, C.T.1    Amaro, C.2    Wu, K.M.3    Valiente, E.4    Chang, Y.F.5    Tsai, S.F.6    Chang, C.H.7    Hor, L.I.8
  • 29
    • 0022446725 scopus 로고
    • Plasmid carriage in Vibrio vulnificus and other lactose- fermenting marine vibrios
    • 203455, 3729404
    • Davidson LS, Oliver JD. Plasmid carriage in Vibrio vulnificus and other lactose- fermenting marine vibrios. Appl Environ Microbiol 1986, 52:211-213. 203455, 3729404.
    • (1986) Appl Environ Microbiol , vol.52 , pp. 211-213
    • Davidson, L.S.1    Oliver, J.D.2
  • 31
    • 65549153156 scopus 로고    scopus 로고
    • The integron/gene cassette system: an active player in bacterial adaptation
    • full_text, 19271181
    • Labbate M, Case RJ, Stokes HW. The integron/gene cassette system: an active player in bacterial adaptation. Methods Mol Biol 2009, 532:103-125. full_text, 19271181.
    • (2009) Methods Mol Biol , vol.532 , pp. 103-125
    • Labbate, M.1    Case, R.J.2    Stokes, H.W.3
  • 32
    • 0032562596 scopus 로고    scopus 로고
    • A distinctive class of integron in the Vibrio cholerae genome
    • 10.1126/science.280.5363.605, 9554855
    • Mazel D, Dychinco B, Webb VA, Davies J. A distinctive class of integron in the Vibrio cholerae genome. Science 1998, 280:605-608. 10.1126/science.280.5363.605, 9554855.
    • (1998) Science , vol.280 , pp. 605-608
    • Mazel, D.1    Dychinco, B.2    Webb, V.A.3    Davies, J.4
  • 33
    • 33846847846 scopus 로고    scopus 로고
    • C-di-GMP-mediated regulation of virulence and biofilm formation
    • 10.1016/j.mib.2006.12.006, 17208514
    • Cotter PA, Stibitz S. c-di-GMP-mediated regulation of virulence and biofilm formation. Curr Opin Microbiol 2007, 10:17-23. 10.1016/j.mib.2006.12.006, 17208514.
    • (2007) Curr Opin Microbiol , vol.10 , pp. 17-23
    • Cotter, P.A.1    Stibitz, S.2
  • 34
    • 0034999675 scopus 로고    scopus 로고
    • Flp-1, the first representative of a new pilin gene subfamily, is required for non-specific adherence of Actinobacillus actinomycetemcomitans
    • 10.1046/j.1365-2958.2001.02422.x, 11359562
    • Kachlany SC, Planet PJ, DeSalle R, Fine DH, Figurski DH, Kaplan JB. flp-1, the first representative of a new pilin gene subfamily, is required for non-specific adherence of Actinobacillus actinomycetemcomitans. Mol Microbiol 2001, 40:542-554. 10.1046/j.1365-2958.2001.02422.x, 11359562.
    • (2001) Mol Microbiol , vol.40 , pp. 542-554
    • Kachlany, S.C.1    Planet, P.J.2    DeSalle, R.3    Fine, D.H.4    Figurski, D.H.5    Kaplan, J.B.6
  • 35
    • 0024239524 scopus 로고
    • Sulfated glycolipids and cell adhesion
    • 10.1016/0003-9861(88)90046-X, 3063211
    • Roberts DD, Ginsburg V. Sulfated glycolipids and cell adhesion. Arch Biochem Biophys 1988, 267:405-415. 10.1016/0003-9861(88)90046-X, 3063211.
    • (1988) Arch Biochem Biophys , vol.267 , pp. 405-415
    • Roberts, D.D.1    Ginsburg, V.2
  • 36
    • 0025738161 scopus 로고
    • Galactosyl ceramide or a derivative is an essential component of the neural receptor for human immunodeficiency virus type 1 envelope glycoprotein gp120
    • 10.1073/pnas.88.16.7131, 52247, 1871126
    • Bhat S, Spitalnik SL, Gonzalez-Scarano F, Silberberg DH. Galactosyl ceramide or a derivative is an essential component of the neural receptor for human immunodeficiency virus type 1 envelope glycoprotein gp120. Proc Natl Acad Sci USA 1991, 88:7131-7134. 10.1073/pnas.88.16.7131, 52247, 1871126.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 7131-7134
    • Bhat, S.1    Spitalnik, S.L.2    Gonzalez-Scarano, F.3    Silberberg, D.H.4
  • 37
    • 0028148526 scopus 로고
    • Sulfated glycoconjugate receptors for the Bordetella pertussis adhesin filamentous hemagglutinin (FHA) and mapping of the heparin-binding domain on FHA
    • 303220, 7927782
    • Hannah JH, Menozzi FD, Renauld G, Locht C, Brennan MJ. Sulfated glycoconjugate receptors for the Bordetella pertussis adhesin filamentous hemagglutinin (FHA) and mapping of the heparin-binding domain on FHA. Infect Immun 1994, 62:5010-5019. 303220, 7927782.
    • (1994) Infect Immun , vol.62 , pp. 5010-5019
    • Hannah, J.H.1    Menozzi, F.D.2    Renauld, G.3    Locht, C.4    Brennan, M.J.5
  • 38
    • 0030034635 scopus 로고    scopus 로고
    • Role of sulfatides in adhesion of Helicobacter pylori to gastric cancer cells
    • 173811, 8550217
    • Kamisago S, Iwamori M, Tai T, Mitamura K, Yazaki Y, Sugano K. Role of sulfatides in adhesion of Helicobacter pylori to gastric cancer cells. Infect Immun 1996, 64:624-628. 173811, 8550217.
    • (1996) Infect Immun , vol.64 , pp. 624-628
    • Kamisago, S.1    Iwamori, M.2    Tai, T.3    Mitamura, K.4    Yazaki, Y.5    Sugano, K.6
  • 39
    • 0033849911 scopus 로고    scopus 로고
    • Escherichia coliK1 aslA contributes to invasion of brain microvascular endothelial cells in vitro and in vivo
    • 10.1128/IAI.68.9.5062-5067.2000, 101739, 10948126
    • Hoffman JA, Badger JL, Zhang Y, Huang SH, Kim KS. Escherichia coliK1 aslA contributes to invasion of brain microvascular endothelial cells in vitro and in vivo. Infect Immun 2000, 68:5062-5067. 10.1128/IAI.68.9.5062-5067.2000, 101739, 10948126.
    • (2000) Infect Immun , vol.68 , pp. 5062-5067
    • Hoffman, J.A.1    Badger, J.L.2    Zhang, Y.3    Huang, S.H.4    Kim, K.S.5
  • 40
    • 0023378316 scopus 로고
    • Use of sodium dodecyl sulfate-polymyxin B-sucrose medium for isolation of Vibrio vulnificus from shellfish
    • 203909, 3662506
    • Bryant RG, Jarvis J, Janda JM. Use of sodium dodecyl sulfate-polymyxin B-sucrose medium for isolation of Vibrio vulnificus from shellfish. Appl Environ Microbiol 1987, 53:1556-1559. 203909, 3662506.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 1556-1559
    • Bryant, R.G.1    Jarvis, J.2    Janda, J.M.3
  • 41
    • 67449122992 scopus 로고    scopus 로고
    • Insights into the evolution of sialic acid catabolism among bacteria
    • 10.1186/1471-2148-9-118, 2693436, 19470179
    • Almagro-Moreno S, Boyd EF. Insights into the evolution of sialic acid catabolism among bacteria. BMC Evol Biol 2009, 9:118. 10.1186/1471-2148-9-118, 2693436, 19470179.
    • (2009) BMC Evol Biol , vol.9 , pp. 118
    • Almagro-Moreno, S.1    Boyd, E.F.2
  • 42
    • 67651213994 scopus 로고    scopus 로고
    • The capability of catabolic utilization of N-acetylneuraminic acid, a sialic acid, is essential for Vibrio vulnificus pathogenesis
    • 10.1128/IAI.00109-09, 2715665, 19487477
    • Jeong HG, Oh MH, Kim BS, Lee MY, Han HJ, Choi SH. The capability of catabolic utilization of N-acetylneuraminic acid, a sialic acid, is essential for Vibrio vulnificus pathogenesis. Infect Immun 2009, 77:3209-3217. 10.1128/IAI.00109-09, 2715665, 19487477.
    • (2009) Infect Immun , vol.77 , pp. 3209-3217
    • Jeong, H.G.1    Oh, M.H.2    Kim, B.S.3    Lee, M.Y.4    Han, H.J.5    Choi, S.H.6
  • 43
    • 67650532135 scopus 로고    scopus 로고
    • Genomic and systems evolution in Vibrionaceae species
    • 10.1186/1471-2164-10-S1-S11, 2709254, 19594870
    • Gu J, Neary J, Cai H, Moshfeghian A, Rodriguez SA, Lilburn TG, Wang Y. Genomic and systems evolution in Vibrionaceae species. BMC Genomics 2009, 10(Suppl 1):S11. 10.1186/1471-2164-10-S1-S11, 2709254, 19594870.
    • (2009) BMC Genomics , vol.10 , Issue.SUPPL. 1
    • Gu, J.1    Neary, J.2    Cai, H.3    Moshfeghian, A.4    Rodriguez, S.A.5    Lilburn, T.G.6    Wang, Y.7
  • 45
    • 34249723655 scopus 로고    scopus 로고
    • Advanced sequencing technologies and their wider impact in microbiology
    • 10.1242/jeb.001370, 17449817
    • Hall N. Advanced sequencing technologies and their wider impact in microbiology. J Exp Biol 2007, 210:1518-1525. 10.1242/jeb.001370, 17449817.
    • (2007) J Exp Biol , vol.210 , pp. 1518-1525
    • Hall, N.1
  • 46
    • 0017681196 scopus 로고
    • DNA sequencing with chain-terminating inhibitors
    • 10.1073/pnas.74.12.5463, 431765, 271968
    • Sanger F, Nicklen S, Coulson AR. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 1977, 74:5463-5467. 10.1073/pnas.74.12.5463, 431765, 271968.
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 5463-5467
    • Sanger, F.1    Nicklen, S.2    Coulson, A.R.3
  • 47
    • 36849073678 scopus 로고    scopus 로고
    • Sequencing breakthroughs for genomic ecology and evolutionary biology
    • Hudson ME. Sequencing breakthroughs for genomic ecology and evolutionary biology. Mol Ecol Resour 2008, 8:3-17.
    • (2008) Mol Ecol Resour , vol.8 , pp. 3-17
    • Hudson, M.E.1
  • 48
    • 39649117755 scopus 로고    scopus 로고
    • The impact of next-generation sequencing technology on genetics
    • Mardis ER. The impact of next-generation sequencing technology on genetics. Trends Genet 2008, 24:133-141.
    • (2008) Trends Genet , vol.24 , pp. 133-141
    • Mardis, E.R.1
  • 49
    • 53649088131 scopus 로고    scopus 로고
    • Applications of next-generation sequencing technologies in functional genomics
    • 10.1016/j.ygeno.2008.07.001, 18703132
    • Morozova O, Marra MA. Applications of next-generation sequencing technologies in functional genomics. Genomics 2008, 92:255-264. 10.1016/j.ygeno.2008.07.001, 18703132.
    • (2008) Genomics , vol.92 , pp. 255-264
    • Morozova, O.1    Marra, M.A.2
  • 50
    • 58249138817 scopus 로고    scopus 로고
    • Generations of sequencing technologies
    • 10.1016/j.ygeno.2008.10.003, 18992322
    • Pettersson E, Lundeberg J, Ahmadian A. Generations of sequencing technologies. Genomics 2009, 93:105-111. 10.1016/j.ygeno.2008.10.003, 18992322.
    • (2009) Genomics , vol.93 , pp. 105-111
    • Pettersson, E.1    Lundeberg, J.2    Ahmadian, A.3
  • 51
    • 53649100100 scopus 로고    scopus 로고
    • The development and impact of 454 sequencing
    • 10.1038/nbt1485, 18846085
    • Rothberg JM, Leamon JH. The development and impact of 454 sequencing. Nat Biotechnol 2008, 26:1117-1124. 10.1038/nbt1485, 18846085.
    • (2008) Nat Biotechnol , vol.26 , pp. 1117-1124
    • Rothberg, J.M.1    Leamon, J.H.2
  • 55
    • 58149086963 scopus 로고    scopus 로고
    • Next-generation sequencing-the promise and perils of charting the great microbial unknown
    • 10.1007/s00248-008-9465-9, 19015912
    • Snyder LAS, Loman N, Pallen MJ, Penn CW. Next-generation sequencing-the promise and perils of charting the great microbial unknown. Microbial Ecology 2009, 57:1-3. 10.1007/s00248-008-9465-9, 19015912.
    • (2009) Microbial Ecology , vol.57 , pp. 1-3
    • Snyder, L.A.S.1    Loman, N.2    Pallen, M.J.3    Penn, C.W.4
  • 56
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology - Human gut microbes associated with obesity
    • 10.1038/4441022a, 17183309
    • Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology - Human gut microbes associated with obesity. Nature 2006, 444:1022-1023. 10.1038/4441022a, 17183309.
    • (2006) Nature , vol.444 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 61
    • 47249120117 scopus 로고    scopus 로고
    • XDR-TB genome sequencing: a glimpse of the microbiology of the future
    • 10.2217/17460913.3.2.111, 18366328
    • Loman NJ, Pallen MJ. XDR-TB genome sequencing: a glimpse of the microbiology of the future. Future Microbiol 2008, 3:111-113. 10.2217/17460913.3.2.111, 18366328.
    • (2008) Future Microbiol , vol.3 , pp. 111-113
    • Loman, N.J.1    Pallen, M.J.2
  • 63
    • 70349668297 scopus 로고    scopus 로고
    • Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing
    • 10.1371/journal.ppat.1000580, 2736377, 19806175
    • Qi W, Kaser M, Roltgen K, Yeboah-Manu D, Pluschke G. Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing. PLos Pathogens 2009, 5:e1000580. 10.1371/journal.ppat.1000580, 2736377, 19806175.
    • (2009) PLos Pathogens , vol.5
    • Qi, W.1    Kaser, M.2    Roltgen, K.3    Yeboah-Manu, D.4    Pluschke, G.5
  • 64
    • 59949090259 scopus 로고    scopus 로고
    • De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
    • 10.1101/gr.083311.108, 2652211, 19015323
    • Reinhardt JA, Baltrus DA, Nishimura MT, Jeck WR, Jones CD, Dangl JL. De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Genome Res 2009, 19:294-305. 10.1101/gr.083311.108, 2652211, 19015323.
    • (2009) Genome Res , vol.19 , pp. 294-305
    • Reinhardt, J.A.1    Baltrus, D.A.2    Nishimura, M.T.3    Jeck, W.R.4    Jones, C.D.5    Dangl, J.L.6
  • 65
    • 85074957997 scopus 로고    scopus 로고
    • A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528
    • 10.1186/1471-2164-10-19, 2633012, 19144141
    • Studholme DJ, Ibanez SG, MacLean D, Dangl JL, Chang JH, Rathjen JP. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528. Bmc Genomics 2009, 10:19. 10.1186/1471-2164-10-19, 2633012, 19144141.
    • (2009) Bmc Genomics , vol.10 , pp. 19
    • Studholme, D.J.1    Ibanez, S.G.2    MacLean, D.3    Dangl, J.L.4    Chang, J.H.5    Rathjen, J.P.6
  • 69
    • 53249091939 scopus 로고    scopus 로고
    • Caenorhabditis elegans mutant allele identification by whole-genome sequencing
    • 10.1038/nmeth.1249, 2574580, 18677319
    • Sarin S, Prabhu S, O'Meara MM, Pe'er I, Hobert O. Caenorhabditis elegans mutant allele identification by whole-genome sequencing. Nat Methods 2008, 5:865-867. 10.1038/nmeth.1249, 2574580, 18677319.
    • (2008) Nat Methods , vol.5 , pp. 865-867
    • Sarin, S.1    Prabhu, S.2    O'Meara, M.M.3    Pe'er, I.4    Hobert, O.5
  • 70
    • 58149200962 scopus 로고    scopus 로고
    • Comparing platforms for C. elegans mutant identification using high-throughput whole-genome sequencing
    • 10.1371/journal.pone.0004012, 2603312, 19107202
    • Shen Y, Sarin S, Liu Y, Hobert O, Pe'er I. Comparing platforms for C. elegans mutant identification using high-throughput whole-genome sequencing. Plos one 2008, 3:e4012. 10.1371/journal.pone.0004012, 2603312, 19107202.
    • (2008) Plos one , vol.3
    • Shen, Y.1    Sarin, S.2    Liu, Y.3    Hobert, O.4    Pe'er, I.5
  • 77
    • 0028097695 scopus 로고
    • Role of iron, capsule, and toxins in the pathogenicity of Vibrio vulnificus biotype 2 for mice
    • 186176, 8300241
    • Amaro C, Biosca EG, Fouz B, Toranzo AE, Garay E. Role of iron, capsule, and toxins in the pathogenicity of Vibrio vulnificus biotype 2 for mice. Infect Immun 1994, 62:759-763. 186176, 8300241.
    • (1994) Infect Immun , vol.62 , pp. 759-763
    • Amaro, C.1    Biosca, E.G.2    Fouz, B.3    Toranzo, A.E.4    Garay, E.5
  • 78
    • 0029882799 scopus 로고    scopus 로고
    • Vibrio vulnificus biotype 2, pathogenic for eels, is also an opportunistic pathogen for humans
    • 167917, 8919812
    • Amaro C, Biosca EG. Vibrio vulnificus biotype 2, pathogenic for eels, is also an opportunistic pathogen for humans. Appl Environ Microbiol 1996, 62:1454-1457. 167917, 8919812.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1454-1457
    • Amaro, C.1    Biosca, E.G.2
  • 81
    • 33748745026 scopus 로고    scopus 로고
    • The Pathway Tools cellular overview diagram and Omics Viewer
    • 10.1093/nar/gkl334, 1557788, 16893960
    • Paley SM, Karp PD. The Pathway Tools cellular overview diagram and Omics Viewer. Nucleic Acids Res 2006, 34:3771-3778. 10.1093/nar/gkl334, 1557788, 16893960.
    • (2006) Nucleic Acids Res , vol.34 , pp. 3771-3778
    • Paley, S.M.1    Karp, P.D.2
  • 84
    • 33846415810 scopus 로고    scopus 로고
    • A real-time PCR assay for the rapid determination of 16 S rRNA genotype in Vibrio vulnificus
    • 10.1016/j.mimet.2006.02.018, 17070612
    • Vickery MC, Nilsson WB, Strom MS, Nordstrom JL, DePaola A. A real-time PCR assay for the rapid determination of 16 S rRNA genotype in Vibrio vulnificus. J Microbiol Methods 2007, 68:376-384. 10.1016/j.mimet.2006.02.018, 17070612.
    • (2007) J Microbiol Methods , vol.68 , pp. 376-384
    • Vickery, M.C.1    Nilsson, W.B.2    Strom, M.S.3    Nordstrom, J.L.4    DePaola, A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.