Phylogenetic relationships and biogeographical patterns in Circum-Mediterranean subfamily Leuciscinae (Teleostei, Cyprinidae) inferred from both mitochondrial and nuclear data

BMC Evolutionary Biology

Volumn 10, Issue 1, 2010, Pages

  Perea, Silvia ^a   Böhme, Madelaine ^b   Zupančič, Primož ^c   Freyhof, Jörg ^d   Šanda, Radek ^e   Özulu, Müfit ^f   Abdoli, Asghar ^g   Doadrio, Ignacio ^a  

^a MUSEO NACIONAL DE CIENCIAS NATURALES   (Spain)

^b UNIVERSITY OF TÜBINGEN   (Germany)

^c AZV Agency   (Slovenia)

^d LEIBNIZ INSTITUTE OF FRESHWATER ECOLOGY AND INLAND FISHERIES   (Germany)

^e DEPARTMENT OF ENTOMOLOGY   (Czech Republic)

^f ISTANBUL UNIVERSITY   (Turkey)

^g SHAHID BEHESHTI UNIVERSITY   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTIVE RADIATION; BIOGEOGRAPHY; CLADISTICS; COLONIZATION; CYPRINID; DATA SET; DISPERSAL; FRESHWATER ENVIRONMENT; FUNCTIONAL MORPHOLOGY; GENETIC ANALYSIS; GENETIC MARKER; GLACIATION; HUMIDITY; HYDROGEOLOGY; HYPOTHESIS TESTING; MESSINIAN; MITOCHONDRION; NUMERICAL MODEL; OLIGOCENE; PALEOCLIMATE; PHYLOGENY; PLEISTOCENE; POPULATION DISTRIBUTION; POPULATION STRUCTURE; SALINITY; SPECIES DIVERSITY; TAXONOMY; VICARIANCE;

EUROPE; MEDITERRANEAN REGION; NORTH AFRICA;

CYPRINIDAE; CYPRINIFORMES; LEUCISCINAE; PSEUDOPHOXINUS; TELEOSTEI;

CYTOCHROME B; CYTOCHROME C OXIDASE; MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; BAYES THEOREM; CLASSIFICATION; CYPRINIFORMES; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY; SOUTHERN EUROPE; SPECIES DIFFERENTIATION;

ANIMALS; BAYES THEOREM; CYPRINIDAE; CYTOCHROMES B; DNA, MITOCHONDRIAL; ELECTRON TRANSPORT COMPLEX IV; EVOLUTION, MOLECULAR; GENETIC SPECIATION; MEDITERRANEAN REGION; PHYLOGENY;

EID: 77956491519     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-265     Document Type: Article

References (168)

1. Cyprinidae of Eurasia. P Banarescu BW Coad, Cyprinid fishes, Systematics, Biology and Explotation London: Chapman and Hall, Winfield IJ, Nelson JE, 1 1991 127 155
2. Handbook of European Freshwater Fishes. M Kottelat J Freyhof, Berlin 2007
3. Fishes of the world. JE Nelson, 4 2006
4. Phylogenetic relationships of Iberian cyprinids: Systematics and biogeographical implications. R Zardoya I Doadrio, Proc R Soc Lond B 1998 265 1365 1372 10.1098/rspb.1998.0443 (Pubitemid 28372096)
5. Molecular evidence of the evolutionary and biogeographical patterns of European cyprinids. R Zardoya I Doadrio, J Mol Evol 1999 49 227 237 10.1007/PL00006545 10441674
6. Phylogeny and Biogeography of the family Cyprinidae in the Middle East inferred from cytochrome b DNA-Evolutionary significance of this region. JD Durand CS Tsigenopoulos E nlü P Berrebi, Mol Phylogenet Evol 2002 22 1 91 100 10.1006/mpev.2001.1040 11796032
7. Insight into the origin of endemic Mediterranean ichthyofauna: phylogeography of Chondrostoma genus (Teleostei, Cyprinidae). JD Durand PG Bianco J Laroche A Gilles, J Hered 2003 94 4 315 328 10.1093/jhered/esg074 12920103
8. Fresh-water fishes and West Indian zoogeography. GS Myers, Annual Report of the Board of Regents of the Smithsonian Institution 92 (1938, for the year 1937) 1938 339 364
9. Comparative mtDNA phylogeography of neotropical freshwater fishes: testing shared history to infer the evolutionary landscape of lower Central America. E Bermingham AP Martin, Mol Ecol 1998 7 4 499 517 10.1046/j.1365-294x. 1998.00358.x 9628002
10. Delimitation of areas in the Iberian Peninsula on the basis of the freshwater fishes. I Doadrio, Bonn Zool Beiträge 1998 39 113 128
11. Nested clade and phylogeographic analyses of the chub, Leuciscus cephalus (Teleostei, Cyprinidae), in Greece: implications for Balkan Peninsula biogeography. JD Durand AR Templeton B Guinand A Imsiridou Y Bouvet, Mol Phylogenet Evol 1999 13 3 566 580 10.1006/mpev.1999.0671 10620414
12. A chromosome study on two Cyprinid Fishes Acrossocheilus labiatus and Pseudorasbora pumila pumila, with notes on Eurasian Cyprinids and their karyotypes. R Arai, Bull Natn Sci Mus, Tokyo Ser A 1982 8 131 152
13. Major groups within the family Cyprinidae and their phylogenetic relationship. XL Chen PQ Yue RD Lin, Acta Zool Sinica 1984 9 424 440
14. The anatomy, phylogeny, and classification of bariliine cyprinid fishes. GJ Howes, Bull Brit Mus Nat Hist Zoology 1980 37 129 198
15. Phylogenetic relationship of North American Cyprinidae. TM Cavender MM Coburn, Systematics, historical ecology and North American freshwater fishes California: Standford University Press, Mayden RL, 1992 293 327
16. Molecular systematics of the Cyprinoidea (Teleostei: Cypriniformes, the world's largest clade of freshwater fishes: Further evidence from six nuclear genes). W-J Chen RL Mayden, Mol Phylogenet Evol 2009 52 544 549 10.1016/j.ympev.2009.01.006 19489125
17. The world's smallest vertebrae species of the genus Paedocypris: A new family of freshwater fishes and the sister group of the world's most diverse clade of freshwater fishes (Teleostei: Cypriniformes). RL Mayden W-J Chen, Mol Phylogenet Evol 2010
18. Molecular Phylogeny of Cyprinidae inferred from cytochrome b DNA sequences. J Briolay N Galtier RM Brito Y Bouvet, Mol Phylogenet Evol 1998 9 100 108 10.1006/mpev.1997.0441 9479699
19. Partial combination applied to phylogeny of European cyprinids using the mitochondrial control region. A Gilles G Lecointre A Miquelis M Loerstcher R Chappaz G Brun, Mol Phylogenet Evol 2001 19 22 23 10.1006/mpev.2000.0916 11286488
20. Phylogenetic relationships of Eurasian and American cyprinids using cytochrome b sequences. C Cunha N Mesquita TE Dowling A Gilles MM Coelho, J Fish Biol 2002 61 929 944 10.1111/j.1095-8649.2002.tb01853.x
21. Sequence variation in the mtDNA control region and their implications for the phylogeny of Cypriniformes. H Liu CS Tzeng HY Teng, Can J Zool 2002 81 1938 1946 10.1139/z03-169
22. Mitogenic evolution and relationships of the Cypriniformes (Actinopterygii, Ostariophysi): the first evidence toward resolution of higher-level relationships of the world's largest freshwater fish clade based on59 whole mitogenome sequences. K Saitoh T Sado RL Mayden N Hanzawa K Nakamura M Nishida M Miya, J Mol Evol 2006 63 6 826 841 10.1007/s00239-005-0293-y 17086453
23. Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate. L Rüber M Kottelat HH Tan PKL Ng R Britz, BMC Evol Biol 2007 7 38
24. Morphological basics in cyprinid fish of Leuciscinae subfamily (Leuciscinae, Cyprinidae). NG Bogutskaya, Vop Ikthiol 1990 30 6 920 933
25. Systematic and Biogeography: an overview. GJ Howes, Cyprinid fishes: Systematic, biology and explotaition London: Chapman and Hall, Winfield IJ, Nelson JE, 1991 1 33
26. Molecular evidence for the monophyly of East Asian groups of Cyprinidae (Teleostei: Cypriniformes) derived from the nuclear recombination activating gene 2 sequences. X Wang J Li S He, Mol Phylogenet Evol 2007 42 1 157 170 10.1016/j.ympev.2006.06.014 16919973
27. Phylogenetic relationships of North American phoxinins (Actinopterygii: Cypriniformes: Leuciscidae) as inferred from S7 nuclear DNA sequences. AP Bufalino RL Mayden, Mol Phylogenet Evol 2010 55 143 152 10.1016/j.ympev.2009.11. 001 19909821
28. The fossil record of Cyprinidae. TM Cavender, Cyprinid Fishes: Systematic, Biology and Exploitation London: Chapman and Hall, Winfield IJ, Nelson JE, 1991 34 54
29. The Miocene non-marine fish-fauna of Central Europe: A review. J Gaudant, Bull Acad serbe sci arts 2002 125 65 74
30. Reconstruction of Oligocene and Neogene freshwater fish faunas- an actualistic study on cypriniforms otoliths. T Schulz-Mirbach B Reichenbacher, Acta Paleontol Pol 2006 51 2 283 304
31. Cyprinid fishes of Southeast Asia. WJ Rainboth, Cyprinid fishes: Systematics, biology and exploitation London: Chapman and Hall, Winfield IJ, Nelson JE, 1991 156 210
32. Evolutionary and biogeographical patterns within Iberian populations of the genus Squalius inferred from molecular data. OI Sanjur JA Carmona I Doadrio, Mol Phylogenet Evol 2003 29 20 30 10.1016/S1055-7903(03)00088-5 12967604
33. Freshwater fish fauna of North Africa and its biogeography. I Doadrio, Kontinlijk Museum voor Midden Africa Tervuren Belgie Annalen Zoologische Wetenschappen 1994 275 21 34
34. Zoogeography and history of the freshwater fish faune of Europe. P Banarescu, The freshwater fishes of Europe Wiesbaden: Aula Verlag, Holcik J, 1989 1 80 107
35. Zoogeography of Fresh Waters. Distribution and dispersal of freshwater animals in North America and Europe. P Banarescu, Wiesbaden: Aula Verlag 1992 2
36. The distribution and origin of freshwater fishes in the Balkan Peninsula, especially in Greece. PS Economidis P Banarescu, Int Rev Ges Hydrobio 1991 76 257 283 10.1002/iroh.19910760209
37. Testing freshwater Lago Mare dispersal theory on the phylogeny relationships of Iberian cyprinids genera Chondrostoma and Squalius (Cypriniformes, Cyprinidae). I Doadrio JA Carmona, Graellsia 2003 59 2-3 457 473
38. Potencial role of Mediterranean and Paratethys basin on the early dispersal of the Europe-Mediterranean freshwater fishes. PG Bianco, Ichthyol Explor Fres 1990 1 167 184
39. History of the Mediterranean salinity crisis. K Hsü L Montadert D Bernuilli MB Cita A Erickson BE Garrison RB Kidd F Mèlierés C Müller R Wright, Nature 1977 267 399 403 10.1038/267399a0
40. Chronology, causes and progression of the Messinian salinity crisis. W Krijgsman FJ Hilgen I Raffi F Sierro DS Wilson, Nature 1999 400 652 655 10.1038/23231 (Pubitemid 29382565)
41. Messinian salinity crisis and the origin of freshwater lifestyle in western Mediterranean Gobies. E Penzo G Gandolfi L Bargelloni L Colombo T Patarnello, Mol Biol Evol 1998 15 11 1472 1480 12572610
42. Molecular phylogeny of two lineages of Leuciscinae cyprinid (Telestes and Scardinius) from peri-Mediterranean area based on cytochrome b data. V Ketmaier PG Bianco M Cobolli M Krivokapic M Caniglia dE Matthaeis, Mol Phylogenet Evol 2004 32 1061 1071 10.1016/j.ympev.2004.04.008 15288075
43. Phylogenetic relationships and biogeography of the genus Chondrostoma inferred from mitochondrial DNA sequences. I Doadrio JA Carmona, Mol Phylogenet Evol 2004 33 802 815 10.1016/j.ympev.2004.07.008 15522805
44. Zoogeography of the freshwater fishes of Iran. BW Coad, Proceedings of the Symposium on the Fauna and Zoogeography of the Middle East Weisbaden: Beihefte zum. TAVO A 28, Krupp F, Schneider W, Kinzelbach R, 1987
45. Zoogeography of the fishes of the Tigris-Euphrates basin. BW Coad, Zool Middle East 1996 13 51 70
46. Freshwater fishes of USSR and adjacent countries. LS Berg, Jerusalem: IPST Press 1949 1-3
47. Molecular phylogeny of North Mediterranean freshwater barbs (genus Barbus: Cyprinidae) inferred from cytochrome b sequences: biogeographic and systematic implications. CS Tsigenopoulos P Berrebi, Mol Phylogenet Evol 2000 14 165 179 10.1006/mpev.1999.0702 10679153
48. Origin, radiation, dispersion and allopatric hybridisation in the chub, Leuciscus cephalus. JD Durand E nlü I Doadrio S Pipoyan AR Templeton, Proc R Soc Lond B 2000 267 1687 1697 10.1098/rspb.2000.1196
49. Zoogeography of Fresh Waters. General distribution and dispersal of freshwater animals. P Banarescu, Wiesbaden: Aula Verlag 1990 1
50. Phylogeography of the barbel (Barbus barbus) assessed by mitochondrial DNA variation. P Kotlik P Berrebi, Mol Ecol 2001 10 9 2177 2185 10.1046/j.0962-1083.2001.01344.x 11555260
51. Circum Black Sea phylogeography of Barbus freshwater fishes: divergence in the Pontic glacial refugium. P Kotlik NG Bogutskaya FG Ekmeckçi, Mol Ecol 2004 13 1 87 95 10.1046/j.1365-294X.2003.02021.x 14653791
52. The genetic legacy of quaternary ice ages. G Hewitt, Nature 2000 405 907 913 10.1038/35016000 10879524
53. Genetic consequences of climatic oscillations in the Quaternary. G Hewitt, Philos Trans Roy Soc Lond B 2004 359 1442 183 195 10.1098/rstb.2003.1388 (Pubitemid 38231471)
54. Rapid radiation of the Mediterranean Barbus species (Cyprinidae) after the Messinian salinity crisis of the Mediterranean Sea, inferred from mitochondrial phylogenetic analysis. CS Tsigenopoulos JD Durand E nlü P Berrebi, Zool J Linn Soc 2003 80 2 207 222
55. Phylogenetic relationships and classification of west Paleartic species of the genus Barbus (Osteichthyes, Cyprinidae). I Doadrio, Aquat Living Resour 1990 3 265 282 10.1051/alr:1990028
56. Evolution of the mitochondrial DNA in fishes. A Meyer, Biochemestry and Molecular Biology of Fishes Amsterdam: Elsevier, Hochachka PW, Mommsen TP, 1993 2 3 38
57. Phylogenetic performance of mitochondrial protein coding genes in resolving relationships among vertebrates. R Zardoya A Meyer, Mol Biol Evol 1996 13 933 942 8752002
58. Phylogenetic relationships within the genus Leuciscus (Pisces, Cyprinidae) in Portuguese freshwaters, based on mitochondrial cytochrome b sequences. RM Brito J Briolay N Galtier Y Bouvet MM Coelho, Mol Phylogenet Evol 1997 8 435 442 10.1006/mpev.1997.0429 9417900
59. Biological identifications through DNA barcodes. PDN Hebert A Cywinska SL Ball JR de Waard, Proc R Soc Lond B 2003 270 313 321 10.1098/rspb.2002.2218 (Pubitemid 36228536)
60. DNA barcoding Australia's fish species. RD Ward TS Zemlak BH Innes PR Last PDN Hebert, Philos Trans Roy Soc Lond B 2005 360 1847 1857 10.1098/rstb.2005.1716 (Pubitemid 44365045)
61. Phylogenetics of European cyprinids: insights from allozymes. B Hänfling R Brandl, J Fish Biol 2000 57 265 276 10.1111/j.1095-8649.2000. tb02171.x
62. Genetic differentiation and biogeography in southern European populations of the genus Scardinius (Pisces, Cyprinidae) based on allozyme data. V Ketmaier PG Bianco M Cobolli E De Matthaeis, Zool Scr 2003 32 1 13 22 10.1046/j.1463-6409.2003.00099.x (Pubitemid 36064204)
63. Phylogenetic position of the Dalmatian genus Phoxinellus and description of Delminichthys, new genus, (Teleostei: Cyprinidae). J Freyhof D Lieckfeldt NG Bogutskaya A Ludwig, Mol Phylogenet Evol 2006 38 416 425 10.1016/j.ympev.2005. 07.024 16214378
64. Molecular insights on the taxonomic position of the paternal ancestor of the Squalius alburnoides hybridogenetic complex. J Robalo C Sousa-Santos A Levy VC Almada, Mol Phylogenet Evol 2007 39 1 276 281 10.1016/j.ympev.2005.08.009
65. Re-examination and phylogeny of the genus Chondrostoma based on mitochondrial and nuclear data and the definition of 5 new genera. J Robalo VC Almada A Levy I Doadrio, Mol Phylogenet Evol 2007 42 362 372 10.1016/j.ympev.2006.07.003 16949308
66. Molecular phylogenetics of the family Cyprinidae (Actinpoterygii: Cypriniformes) as evidenced by sequence variation in the first intron of S7 ribosomal protein-coding gene: further evidence from a nuclear gene of the systematic chaos in the family. S He RL Mayden X Wang W Wang KL Tang W-J Chen Y Chen, Mol Phylogenet Evol 2008 46 3 818 829 10.1016/j.ympev.2007.06.001 18203625
67. Modeltest: testing the model of DNA substitution. D Posada KA Crandall, Bioinformatics 1998 14 9 817 818 10.1093/bioinformatics/14.9.817 9918953
68. Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. B Rannala Z Yang, J Mol Evol 1986 43 304 311 10.1007/BF02338839
69. Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo method. Z Yang B Rannala, Mol Biol Evol 1997 14 717 724 9214744
70. Efficiently resolving the basal clades of a phylogenetic tree using Bayesian and Parsimony approaches: a case study using mitogenomic data from 100 higher teleost fishes. MP Simmons M Miya, Mol Phylogenet Evol 2004 31 1 351 362 10.1016/j.ympev.2003.08.004 15019630
71. Success of phylogenetic methods in the four taxon case. JP Huelsenbeck HD M, Syst Biol 1993 42 247 264
72. Les poissons d'eau douce de tunisie: inventaire commenté et repartition geographique. MM Kraiem, Bull Inst Nain Scient Tech Oceanogr Pche Salammb 1983 10 107 124
73. Les phoxinelles circum-mediterranées (avec la description d'Anaecypris N. Gen.) (Poissons, Cyprinidae). MJ Collares-Pereira, Cybium 1983 7 3 1 7
74. The freshwater fishes of Europe. Threatened fishes of Europe. A Lelek, European Committee for the conservation of Nature and Natural Resources. Council of Europe 1987
75. Die Süsswasserfische Europas. W Ladiges D Vogt, Hamburg: Paul Parey 1979
76. A revision of species of the genus Pseudophoxinus (Leuciscinae, Cyprinidae) from Asia Minor. NG Bogustkaya, Mitt Hamb Zool Mus Inst 1992 89 261 290
77. A description of three new species of the genus Pseudophoxinus from Turkey (Teleostei: Cyprinidae: Leuciscinae). NG Bogustkaya F Küçük MA Atalay, Zoosyst Ross 2007 15 2 335 341
78. Plate tectonics and biogeographical patterns of the Pseudophoxinus (Pisces: Cypriniformes) species complex of central Anatolia, Turkey. T Hrbek KN Stölting F Bardakci F Küçük RH Wildekamp A Meyer, Mol Phylogenet Evol 2004 32 1 297 308 10.1016/j.ympev.2003.12.017 15186815
79. Phoxinellus pseudalepidotus, a new species from the Neretva basin (Teleostei: Cyprinidae) with an overview of the morphology of Phoxinellus species of Croatia and Bosnia and Herzegovina. NG Bogutskaya P Zupančič Ichthyol Explor Fres 2003 14 369 383
80. Genetic differentiation and phylogenetic relationships among Greek chub Leuciscus cephalus L. (Pisces, Cyprinidae) populations as revealed by RFLP analysis of amplified mitochondrial DNA segments. A Imsiridou AP Apostodilis JD Durand J Briolay Y Bouvet T C, Biochem Syst Ecol 1998 26 415 429 10.1016/S0305-1978(97)00123-3 (Pubitemid 28292302)
81. Petroleuciscus, a new genus for the Leuciscus borysthenicus species group (Teleostei: Cyprinidae). NG Bogustkaya, Zoosyst Ross 2002 11 1 235 237
82. Redescription of Leuciscus aphipsi Aleksandrov (Leuciscinae, Cyprinidae). NG Bogustkaya VG Poznyak, Vop Ikthiol 1994 34 3 308 315
83. Ontogeny an Evolutionary development of sensory canal system in cyprinid fishes. NG Bogustkaya, J Morphol 1994 220 3 327
84. Catalogue of agnathans and fishes of fresh and brackish waters of Russia with comments on nomenclature and taxonomy. NG Bogustkaya AM Naseka, Moscow: Russian Academy of Sciences 2004
85. Pseudophoxinus persidis, a new cyprinid fish from Fars, southern Iran. BW Coad, Can J Zool 1981 59 11 2058 2063 10.1139/z81-281
86. Contribution to the knowledge of leuciscine fishes of Asia Minor. Part 1. Morphology and taxonomic relationships of Leuciscus borysthenicus (Kessler), Leuciscus smyrnaeus Boulenger and Ladigesocypris ghigii (Gianferrari) (Cyprinidae, Pisces). NG Bogutskaya, Pulicacián Especial del Instituto Espãol de Oceanografía 1996 21 25 44
87. Leuciscus cephalus (Linnaeus), with record of fingerling adult males, Leuciscus pleurobipunctatus (Stephanidis) and their hybrids from western Greece. PG Bianco, J Fish Biol 1988 32 1 16 10.1111/j.1095-8649.1988.tb05331.x
88. L'ittiofauna continentale dell'Appennino umbromarchigiano, barriera semi permeabile allo scambio di componenti primarie tra fli opposite versanti dell'Italia centrale. PG Bianco, Biogeographia 1994 17 427 485
89. Approccio multidisciplinare all'analisi tassonomica del genere Scardinius (Cyprinidae) en Europa. PG Bianco V Ketmaier T Bussato, Quaderni ETP 2001 30 115 120
90. Evidence of a Cenozoic Betic-Kabilian connection based on freshwater fish phylogeography (Luciobarbus, Cyprinidae). A Machordom I Doadrio, Mol Phylogenet Evol 2001 18 252 263 10.1006/mpev.2000.0876 11161760
91. Evolutionary relationships of the plagoterins (Teleostei: Cyprinidae) from cytochrome b sequences. TE Dowling CA Tibbets WL Minckley RG Smith, Copeia 2002 2002 3 655 678 10.1643/0045-8511(2002)002[0665:EROTPT]2.0.CO;2
92. Comparison of likelihood and Bayseian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Z Yang AD Yoder, Syst Biol 2003 52 705 716 10.1080/10635150390235557 14530137
93. Historical biogeography of European leuciscins (Cyprinidae): evaluating the Lago Mare dispersal hypothesis. A Levy I Doadrio VC Almada, J Biogeogr 2009 36 55 65 10.1111/j.1365-2699.2008.01969.x
94. Die Cypriniden (Teleostei, Cypriniformes) des oberoligozänen Maares von Enspel nebst Bemerkungen zur Phylogenie und Biogeographie der Phoxininae. M Böhme, Palaeontol Z 2000 74 1/2 99 112
95. Revision of the cyprinids from the Early Oligocene of the eské Stedohoí Mountains and the phylogenetic relationships of Protothymallus LAUBE 1901 (Teleostei, Cyprinidae). M Böhme, Acta Mus Nat Prag 2007 63 2-4 177 196
96. Mediterranean and Paratethys. Facts and hypotheses of an Oligocene to Miocene paleogeography (short overview). F Rögl, Geol Carpath 1999 50 339 349
97. Magnetic polarity stratigraphy of late Oligocene to middle Miocene mammal-bearing continental deposits in Central Anatolia (Turkey). W Krijgsman CE Duermeijer CG Langereis H de Bruijn G Saraç PAM Andriessen, Newsl Stratigr 1996 34 1 13 30 (Pubitemid 126140868)
98. Late Oligocene-Middle Miocene Democricetodon, Spanocricetodon and Karydomys n. gen. from the Eastern Mediterranean area. KD Theocharopoulus, National and Kapodistrian University of Athens. Edition of the Department of Geology 2000 8
99. Lateral extrusion in the Eastern Alps, part I: boundary conditions and experiments scaled for gravity. L Ratschbacher O Merle P Davy P Cobbold, Tectonics 1991 10 245 256 10.1029/90TC02622
100. Palinspastic reconstruction and topographic evolution of the Eastern Alps during the late Tertiary extrusion. W Frisch J Kuhlemann I Dunkl A Brügel, Tectonophysics 1998 297 1 15 10.1016/S0040-1951(98)00160-7 (Pubitemid 29412276)
101. Map 7: late Middle Miocene (Late Serravallian, Sarmatian s.s., Middle Sarmartian s.l.). NP Paramonova IG Shcherba SO Khondkarian, Lithological- Palaeogeographic maps of Paratethys Cour. Forsch. Inst. Senckengerg, Popov SV, Rögl F, Rozanov AY, Steininger FF, Shcherba IG, Kovac M, 2004 250 27 29
102. Paleogeographic and paleotopographic of the Swiss and Eastern Alps since the Oligocene. J Kuhlemann, Global Planet Change 2007 58 224 236 10.1016/j.gloplacha.2007.03.007 (Pubitemid 46921435)
103. Palaeomagnetism and palaeogeography. E Marton, The Geology of Central Europe Volumen 2: Mesozoic and Cenozoic London: Geological Society, McCann T, 2008 1033 1035
104. No significant post-Eocene rotation of the Moesian Platform and Rhodope (Bulgaria): Implications fort he kinematic evolution of the Carpatian and Aegean arcs. DJJv Hinsbergen G Dupont-Nivet R Nakov K Oud C Panaiotu, Earth Planet Sc Lett 2008 273 345 358 10.1016/j.epsl.2008.06.051
105. Unusual Braarudosphaera bigelowii and Micrantholithus vesper enrichment in the Early Miocene sediments from the Slovenian Corridor, a seaway linking the Central Paratethys and the Mediterranean. M Bartol J Pavi M Dobnikar SN Bernasconi, Palaeogeogr Palaeocl 2008 267 1-2 77 88 10.1016/j.palaeo.2008.06.005
106. Eine Untermiozäne Fischfauna (Teleostei, Cyprinidae) vom Dietrichsberg bei Vacha/Rhön. M Böhme, Freiberger Forschungshefte, Reihe C 1993 450 116 150
107. Small Cyprinids from the Tertiary of Europe - the genus Palaeoleuciscus (Leuciscinae). M Böhme, 9 International Congress of European Ichthyologists: 1997; Trieste 1997 15
108. Cyprinoidei aus dem Hangenden des Miozänen Braunkohleflözes Nordböhmens. N Obrhelova, Palaeontographica 1967 126 A 141 179
109. Fische des nordböhmischen Braunkohlebeckens. N Obrhelova, Acta Mus Nat Prag 1990 46 1-2 1 35
110. Thrusting and foreland basin evolution in the Southern Pyrenees. C Puigdefbregas JA Mũoz J Vegés, Thrust Tectonics London: Chapman and Hall, McClay KR, 1992 247 254
111. Thrust sequences in the eastern Spanish Pyrenees. JA Mũoz A Martiínez J Vegés, J Struct Geol 1986 8 399 405 10.1016/0191-8141(86)90058-1
112. Tendencias en paleobiogeografía. El futuro de la biogeografía del pasado. N Lápez-Martínez, Paleontología Madrid: CSIC, Aguirre E, 1989 271 296
113. Paleogeography and palinspastic reconstruction of the Neogene of the Mediterranean and Paratethys. FF Steininger F Rögl, The geological evolution of the Eastern Mediterranean Oxford: Blackwell, Dixon JE, Robertson AH, 1984 17 659 668
114. Evolutionary distinctness of grayling {Thymallus thymallus) inhabiting the Adriatic river system, as based on mtDNA variation. S Susnik A Snoj P Dovc, Biol J Linn Soc 2001 74 3 375 385 10.1006/bijl.2001.0583 (Pubitemid 34029878)
115. Alpine and Apennine barriers determining the differentiation of the rudd (Scardinius erythrophthalmus L.) in the Italian peninsula. F Stefani P Galli G Crosa S Zaccara D Calamari, Ecol Freshw Fish 2004 13 168 175 10.1111/j.1600-0633.2004.00060.x (Pubitemid 39115734)
116. Neogene lake systems of Central and South-Eastern Europe: Faunal diversity, gradients and interrelations. M Harzhauser O Mandic, Palaeogeogr Palaeocl 2008 260 417 434 10.1016/j.palaeo.2007.12.013
117. Dinarids in north Croatia and Bosnia. D Paveli M Belak, The Geology of Central Europe Volume 2 Mesozoic and Cenozoic London: Geological Society, McCann T, 2008 1102 1116
118. Biogeographic responses to geodynamics: A key study all around the Oligo-Miocene Tethyan Seaway. M Harzhauser A Kroh O Mandic WE Piller U Göhlich R M B Berning, Zool Anz 2007 246 241 256 10.1016/j.jcz.2007.05.001 (Pubitemid 350011829)
119. Eine Weichschildkröte (Trionychidae) aus dem Untermiozän vom Dietrichsberg bei Vacha (Rhön). M Böhme, Mauritania (Altenburg) 1995 15 3 357 366
120. The oldest-known cyprinid fish of the Afro-Arabic Plate, and its paleobiogeographical implications. O Otero, J Vertebr Paleontol 2001 21 2 386 388 10.1671/0272-4634(2001)021[0386:TOKCFO]2.0.CO;2
121. Paratethyan-Mediterranean connectivity in the Sea of Marmara region (NW-Turkey) during the Messinian. MN aatay N Görür R Flecker M Sakinç C Tünolu R Ellam W Krijgsman S Vincent A Dikba Sediment Geol 2006 188-189 171 187 10.1016/j.sedgeo.2006.03.004 (Pubitemid 43827393)
122. Climatically influenced interaction between the Mediterranean and the Paratethys during the Tortonian. M Sprovieri M Sacchi EJ Rohling, Paleoceanography 2003 18 2 1034 10.1029/2001PA000750
123. Mid-Miocene Circum-Mediterranean palaeogeography. F Rögl, Ber Inst Geol Palaeontol Karl-Franzens Univ Graz Oesterr 2001 4 49 59
124. Biology and Wildlife of the Mediterranean Region. J Blondel J Aronson, Oxford University Press 1999
125. Calibrating the duration and timing of the Messinian salinity crisis in the Mediterranean: linked tectonoclimatic signals in thrust-top basins of Sicily. RWH Butler E McClelland RE Jones, J Geol Soc London 1999 156 4 827 835 10.1144/gsjgs.156.4.0827
126. Regional warming: Pliocene (3 Ma) paleoclimate of Europe and the Mediterranean. AM Haywood BW Sellwood PJ Valdés, Geology 2000 28 12 1063 1066 10.1130/0091-7613(2000)28<1063:RWPMPO>2.0.CO;2
127. Up to date Spanish continental synthesis and paleoclimatic interpretation. JP Calvo R Daams J Morales N Lápez-Martínez J Agustí P Anadán I Armenteros L Cabrera J Civis A Corrochano, et al. Rev Soc Geol Espãa 1993 6 29-40 29
128. Sea-level and deep water temperature changes derived from benthic foraminifera isotopic records. C Waelbrock L Labeyrie E Michel JC Duplessy JF McManus K Lambeck E Balbon M Labracherie, Quaternary Science Rev 2002 21 295 305 10.1016/S0277-3791(01)00101-9 (Pubitemid 34067518)
129. The molecular diversity of adriatic spined loaches (Teleostei, Cobiitidae). A Perdices J Bohlen I Doadrio, Mol Phylogenet Evol 2008 46 1 382 390 10.1016/j.ympev.2007.05.007 17625922
130. The Alps as barrier to dispersal in cold-adapted freshwater fishes? Phylogeographic history and taxonomic status of the bullhead in the Adriatic freshwater drainage. V lechtov J Bohlen J Freyhof H Persat GB Delmastro, Mol Phylogenet Evol 2004 33 1 225 239 10.1016/j.ympev.2004.05.005 15324851
131. Phylogeography and postglacial dispersion of the chub (Leuciscus cephalus) in Europe. JD Durand H Persat Y Bouvet, Mol Ecol 1999 8 6 989 997 10.1046/j.1365-294x.1999.00654.x 10434419
132. European colonization by the spined loach (Cobitis taenia) from Ponto-Caspian refugia based on mitochondrial DNA variation. M Culling K Janko A Boron V Vasil'ev I Coté G Hewitt, Mol Ecol 2006 15 1 173 190 10.1111/j.1365-294X.2005.02790.x 16367839
133. Pleistocene effects on the European freshwater fish fauna: double origin of the cobitid genus Sabanejewia in the Danube basin (Osteichthyes: Cobitidae). A Perdices I Doadrio PS Economidis J Bohlen B P, Mol Phylogenet Evol 2003 26 2 289 299 10.1016/S1055-7903(02)00334-2 12565037
134. Evolution of mosaichybrid zone between invasive and endemic. C Costedoat N Pech M-D Salducci R Chappaz A Gilles, Biol J Linn Soc 2004 85 135 155 10.1111/j.1095-8312.2005.00478.x
135. Genetic variability in Chondrostoma from Austrian, French, and Greek rivers (Teleostei, Cyprinidae). G Gollman Y Bouvet Y Karakousis C Triantaphyllidis, J Zool Syst Evol Res 1997 35 165 169 10.1111/j.1439-0469.1997. tb00420.x
136. A laboratory manual. J Sambrook E Fritsch T Maniatis, New York: Cold Spring Harbor Laboratory 1989
137. Purification of DNA. P Towner, Essential molecular biology A practical approach Oxford: Oxford University Press, Brown T, 1991 47 68
138. The CLUSTAL × windows interfase: flexible strategies for multiple sequence aligment aided by quality analysis tools. J Thompson T Gibson F Plewniak F Jeanmougin D Higgins, Nucl Acids Res 1997 25 4876 4882 10.1093/nar/25.24.4876 9396791
139. Optimization alignment: the end of multiple sequence alignment in phylogenetics? W Wheeler, Cladistics 1996 12 1 9 10.1111/j.1096-0031.1996. tb00189.x
140. Gaps as characters in sequence-based phylogenetic analyses. MP Simmons H Ochoterena, Syst Biol 2000 49 369 381 10.1093/sysbio/49.2.369 12118412
141. A concern for evidence and a phylogenetic hypothesis of relationships among Epicrates (Boidae, Serpentes). A Kluge, Syst Zool 1989 38 7 25 10.2307/2992432
142. PAUP*, Phylogenetic Analysis Using Parsimony (*and other methods) v4.0b10. D Swofford, Sunderland: Sinauer Associates 2002
143. MRBAYES 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/btg180 12912839
144. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. S Guindon O Gascuel, Syst Biol 2003 52 5 696 704 10.1080/10635150390235520 14530136
145. Towards defining the course of evolution: Minimum change for a specific tree topology. W Fitch, Syst Zool 1971 20 406 416 10.2307/2412116
146. Testing significance incongruence. J Farris M Källersjö A Kluge C Bult, Cladistics 1994 10 315 319 10.1111/j.1096-0031.1994.tb00181.x
147. Confidence-limits on phylogenies: An approach using the bootstrap. J Felsenstein, Evolution 1985 39 783 791 10.2307/2408678
148. BEAST: Bayesian evolutionary analysis by sampling trees. A Drummond A Rambaut, BMC Evol Biol 2007 7 214 10.1186/1471-2148-7-214 17996036
149. Relaxed phylogenetics and dating with confidence. A Drummond S Ho M Phillips A Rambaut, PLoS Biol 2006 4 88 10.1371/journal.pbio.0040088
150. Fossil Fishes, Amphibians, Reptiles - fosFARbase. M Böhme A Ilg, 2003 http://www.wahre-staerke.com
151. Freshwater fishes from the Pannonian of the Vienna Basin with special reference to the locality Sandberg near Götzendorf, Lower Austria. M Böhme, Cour Forsch Sekenbg 2002 237 151 173
152. Common and scientific names of fishes from the United States and Canada. CR Robins CE Bailey CE Bond JR Brooker EA Lachner RN Lea WB Scott, 1991 20
153. Alburnus demiri, a new species of bleak from Western Anatolia, Turkey (Teleostei: Cyprinidae). M zulu J Freyhof, Ichthyol Explor Fres 2007 18 4 307 312
154. Contribution to the knowledge of leuciscine fishes of Asia Minor. Part 2. An annotated check-list of leuciscine fishes (Leuciscinae, Cyprinidae) of Turkey with descriptions of a new species and two subespecies. NG Bogutskaya, Mitt Hamb Zool Mus Inst 1997 94 161 186
155. Alburnus baliki, a new species of cyprinid fish from the Manavgat River system, Turkey. NG Bogutskaya F Kucuk E Unlu, Ichthyol Explor Fres 2000 11 1 55 64
156. Catalog of Fishes. WN Eschmeyer, San Francisco: California Academy of Sciencies 2005 1-3
157. Cyprinidae. C Lévque J Daget, Check-list of the freshwater fishes of Africa (CLOFFA) Paris and MRAC: ORSTOM, Daget J, Gosse J-P, Thys van den Audenaerde DFE, 1984 1 217 342
158. A new species of the genus Achondrostoma Robalo, Almada, Levy and Doadrio, 2007 (Actynopterigii, Cyprinidae) from western Spain. I Doadrio B Elvira, Graellsia 2009 63 2 295 304
159. Squalius kottelati, a new cyprinid species (Teleostei, Cyprinidae) from Orontes River Turkey. D Turan BT Yilmaz C Kaya, Zootaxa 2009 2270 53 62
160. Taxonomy of the genus Chondrostoma (Osteichthyes, Cyprinidae): an updated review. B Elvira, Folia Zool 1997 46 1 1 14
161. Freshwater fish in Anatolia, Turkey. S Balik, Biol Cons 1995 72 213 223 10.1016/0006-3207(94)00084-4
162. A new species of Chondrostoma Aggasiz, 1832 (Cypriniformes, Cyprinidae) with sexual dimorphism from the lower Rio Tejo Basin, Portugal. HF Gante CD Santos MJ Alves, Zootaxa 2007 1616 23 35
163. Pseudophoxinus evliyae, a new species of spring minnow from Western Anatolia with remarks on the distribution of P. ninae and the systematic position of P. fahira (Teleostei: Cyprinidae). J Freyhof M zulug, Ichthyol Explor Fres 2009 20 4 309 318
164. The Freshwater Fishes of Israel. M Goren, Israel J Zool 1974 23 67 118
165. IUCN red list of the threatened animals. J Baiilie B Groombridge, Gland, Switzerland: IUCN 1996
166. The fishes of the Jordan River drainage basin and Azraq Oasis. F Krupp W Schneider, Fauna of Arabia Saudi 1989 10 347 416
167. Systematic biodiversity in the freshwater fishes of Iran. BW Coad, Ital J Zool 1998 65 101 108 10.1080/11250009809386802
168. Leuciscinae. Y Luo, Fauna Sinica Osteichthyes Cypriniformes II Beijing: Science Press, Chen Y-Y, 1998 531