A data integration approach to mapping OCT4 gene regulatory networks operative in embryonic stem cells and embryonal carcinoma cells

PLoS ONE

Volumn 5, Issue 5, 2010, Pages

  Jung, Marc ^a   Peterson, Hedi ^b,c   Chavez, Lukas ^a   Kahlem, Pascal ^d   Lehrach, Hans ^a   Vilo, Jaak ^b,c   Adjaye, James ^a  

^a MAX PLANCK INSTITUTE FOR MOLECULAR GENETICS   (Germany)

^b UNIVERSITY OF TARTU   (Estonia)

^c Quretec Ltd ^*  (Estonia)

^d EUROPEAN BIOINFORMATICS INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BONE MORPHOGENETIC PROTEIN 4; CELL PROTEIN; CYCLIN DEPENDENT KINASE 6; CYCLIN DEPENDENT KINASE INHIBITOR 1B; CYCLIN DEPENDENT KINASE INHIBITOR 1C; INHIBITOR OF DIFFERENTIATION 2; MITOGEN ACTIVATED PROTEIN KINASE 4; OCTAMER TRANSCRIPTION FACTOR 4; PROTEIN EOMES; PROTEIN HAND1; PROTEIN ISL1; PROTEIN PHC1; PROTEIN PHF17; PROTEIN USP44; TRANSCRIPTION FACTOR GATA 4; TRANSCRIPTION FACTOR GATA 5; TRANSCRIPTION FACTOR MSX1; TRANSCRIPTION FACTOR NANOG; TRANSCRIPTION FACTOR SOX2; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CELL CYCLE; CELL DIFFERENTIATION; CELL RENEWAL; CELL TYPE; COMPUTER INTERFACE; COMPUTER PREDICTION; COMPUTER PROGRAM; CONTROLLED STUDY; EMBRYONAL CARCINOMA STEM CELL; EMBRYONIC STEM CELL; GENE EXPRESSION; GENE FUNCTION; GENE MAPPING; GENE REGULATORY NETWORK; GENE TARGETING; HUMAN; HUMAN CELL; INFORMATION PROCESSING; INTERMETHOD COMPARISON; NONHUMAN; NUCLEOTIDE SEQUENCE; PLURIPOTENT STEM CELL; REGULATORY MECHANISM; UPREGULATION; VALIDITY;

ALGORITHMS; AMINO ACID MOTIFS; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DATABASES, GENETIC; EMBRYONAL CARCINOMA STEM CELLS; EMBRYONIC STEM CELLS; EVOLUTION, MOLECULAR; GENE REGULATORY NETWORKS; GENOME, HUMAN; HUMANS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; OCTAMER TRANSCRIPTION FACTOR-3; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; QUALITY CONTROL; REPRODUCIBILITY OF RESULTS; SEQUENCE ALIGNMENT; SOXB1 TRANSCRIPTION FACTORS; STATISTICS AS TOPIC;

IPS;

EID: 77956269672     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0010709     Document Type: Article

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