-
1
-
-
34248540337
-
Phylogenetic hypotheses of gorgoniid octocorals according to ITS2 and their predicted RNA secondary structures
-
Aguilar C, Sánchez JA. Phylogenetic hypotheses of gorgoniid octocorals according to ITS2 and their predicted RNA secondary structures. Mol Phylogenet Evol 2007, 43:774-786.
-
(2007)
Mol Phylogenet Evol
, vol.43
, pp. 774-786
-
-
Aguilar, C.1
Sánchez, J.A.2
-
2
-
-
0035103069
-
Temperature-based variation of rRNA secondary structure models: a case study in the insect Drosophila simulans, the land snail Isabellaria adriani, and the crustacean Daphnia pulex
-
Armbruster GFJ. Temperature-based variation of rRNA secondary structure models: a case study in the insect Drosophila simulans, the land snail Isabellaria adriani, and the crustacean Daphnia pulex. Can J Zool 2001, 79:334-345.
-
(2001)
Can J Zool
, vol.79
, pp. 334-345
-
-
Armbruster, G.F.J.1
-
3
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
-
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA. The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 2000, 289:905-920.
-
(2000)
Science
, vol.289
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
4
-
-
0034972845
-
Identification of cis-acting elements involved in 3'-end formation of Saccharomyces cerevisiae 18S rRNA
-
van Beekvelt CA, Jeeninga RE, van't Riet J, Venema J, Raué HA. Identification of cis-acting elements involved in 3'-end formation of Saccharomyces cerevisiae 18S rRNA. RNA 2001, 7:896-903.
-
(2001)
RNA
, vol.7
, pp. 896-903
-
-
van Beekvelt, C.A.1
Jeeninga, R.E.2
van't Riet, J.3
Venema, J.4
Raué, H.A.5
-
5
-
-
34248197068
-
Evolution of ITS ribosomal RNA secondary structures in fungal and algal symbionts of selected species of Cladonia sect. Cladonia (Cladoniaceae, Ascomycotina)
-
Beiggi S, Piercey-Normore MD. Evolution of ITS ribosomal RNA secondary structures in fungal and algal symbionts of selected species of Cladonia sect. Cladonia (Cladoniaceae, Ascomycotina). J Mol Evol 2007, 64:528-542.
-
(2007)
J Mol Evol
, vol.64
, pp. 528-542
-
-
Beiggi, S.1
Piercey-Normore, M.D.2
-
6
-
-
0011099792
-
Orthoptera Vol. II No. 2 Tettigonioidea Phaneropterinae
-
Zoological Institute, Leningard, [English translation of Russian original in 1965]
-
Bey-Bienko GY. Orthoptera Vol. II No. 2 Tettigonioidea Phaneropterinae. Fauna of the U.S.S.R. Zoological Institute Akademii Nauk SSSR 1954, 252-375. Zoological Institute, Leningard, [English translation of Russian original in 1965]
-
(1954)
Fauna of the U.S.S.R. Zoological Institute Akademii Nauk SSSR
, pp. 252-375
-
-
Bey-Bienko, G.Y.1
-
7
-
-
33947576587
-
Structural partitioning, paired-sites models and evolution of the ITS transcript in Syzygium and Myrtaceae
-
Biffin E, Harrington MG, Crisp MD, Craven LA, Gadek PA. Structural partitioning, paired-sites models and evolution of the ITS transcript in Syzygium and Myrtaceae. Mol Phylogenet Evol 2007, 43:124-139.
-
(2007)
Mol Phylogenet Evol
, vol.43
, pp. 124-139
-
-
Biffin, E.1
Harrington, M.G.2
Crisp, M.D.3
Craven, L.A.4
Gadek, P.A.5
-
8
-
-
0034509627
-
Secondary structure and conserved motifs of the frequently sequenced domains IV and V of the insect mitochondrial large subunit rRNA gene
-
Buckley TR, Simon C, Flook PK, Misof B. Secondary structure and conserved motifs of the frequently sequenced domains IV and V of the insect mitochondrial large subunit rRNA gene. Insect Mol Biol 2000, 9:565-580.
-
(2000)
Insect Mol Biol
, vol.9
, pp. 565-580
-
-
Buckley, T.R.1
Simon, C.2
Flook, P.K.3
Misof, B.4
-
9
-
-
34250821680
-
Pan-eukaryote ITS2 homologies revealed by RNA secondary structure
-
Coleman AW. Pan-eukaryote ITS2 homologies revealed by RNA secondary structure. Nucleic Acids Res 2007, 35:3322-3329.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3322-3329
-
-
Coleman, A.W.1
-
10
-
-
0036276111
-
Dynamic conformational model for the role of ITS2 in pre-rRNA processing in yeast
-
Côté CA, Greer CL, Peculis BA. Dynamic conformational model for the role of ITS2 in pre-rRNA processing in yeast. RNA 2002, 8:786-797.
-
(2002)
RNA
, vol.8
, pp. 786-797
-
-
Côté, C.A.1
Greer, C.L.2
Peculis, B.A.3
-
11
-
-
0033944805
-
Sequence and secondary structure variation in the Gyrodactylus (Plathelminthes: Monogenea) ribosomal RNA gene array
-
Cunninham CO, Aliesky H, Collins CM. Sequence and secondary structure variation in the Gyrodactylus (Plathelminthes: Monogenea) ribosomal RNA gene array. J Parasitol 2000, 86:567-576.
-
(2000)
J Parasitol
, vol.86
, pp. 567-576
-
-
Cunninham, C.O.1
Aliesky, H.2
Collins, C.M.3
-
12
-
-
13344279384
-
Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction
-
Doshi KJ, Cannone JJ, Cobaugh CW, Gutell RR. Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. BMC Bioinformatics 2004, 5:105.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 105
-
-
Doshi, K.J.1
Cannone, J.J.2
Cobaugh, C.W.3
Gutell, R.R.4
-
13
-
-
69949176617
-
Orthoptera species file online: version 2.0/3.1
-
Available at: (accessed on 28 August 2008)
-
Eades DC, Otte D, Naskrecki P. Orthoptera species file online: version 2.0/3.1. 2007, http://osf2.orthoptera.org, Available at: (accessed on 28 August 2008)
-
(2007)
-
-
Eades, D.C.1
Otte, D.2
Naskrecki, P.3
-
14
-
-
53849113977
-
A phylogeny of anisopterous dragonflies using mt RNA genes and mixed nucleotide/doublet models
-
Fleck G, Ullrich B, Brenk M, Wallnisch C, Orland M, Bleidissel S, Misof B. A phylogeny of anisopterous dragonflies using mt RNA genes and mixed nucleotide/doublet models. J Zoolog Syst Evol Res 2008, 46:310-322.
-
(2008)
J Zoolog Syst Evol Res
, vol.46
, pp. 310-322
-
-
Fleck, G.1
Ullrich, B.2
Brenk, M.3
Wallnisch, C.4
Orland, M.5
Bleidissel, S.6
Misof, B.7
-
15
-
-
1642336483
-
Sampling properties of the bootstrap support in molecular phylogeny: influence of nonindependence among sites
-
Galtier N. Sampling properties of the bootstrap support in molecular phylogeny: influence of nonindependence among sites. Syst Biol 2004, 53:38-46.
-
(2004)
Syst Biol
, vol.53
, pp. 38-46
-
-
Galtier, N.1
-
16
-
-
33750442556
-
Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements
-
Gillespie JJ, Johnston JS, Cannone JJ, Gutell RR. Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements. Insect Mol Biol 2006, 15:657-686.
-
(2006)
Insect Mol Biol
, vol.15
, pp. 657-686
-
-
Gillespie, J.J.1
Johnston, J.S.2
Cannone, J.J.3
Gutell, R.R.4
-
17
-
-
0346971259
-
ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae
-
Goertzen LR, Cannone JJ, Gutell RR, Jansen RK. ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae. Mol Phylogenet Evol 2003, 29:216-234.
-
(2003)
Mol Phylogenet Evol
, vol.29
, pp. 216-234
-
-
Goertzen, L.R.1
Cannone, J.J.2
Gutell, R.R.3
Jansen, R.K.4
-
18
-
-
23944459513
-
Molecular phylogeny of Staurastrum Meyen ex Ralfs and related genera (Zygnematophyceae, Streptophyta) based on coding and noncoding rDNA sequence comparisons
-
Gontcharov AA, Melkonian M. Molecular phylogeny of Staurastrum Meyen ex Ralfs and related genera (Zygnematophyceae, Streptophyta) based on coding and noncoding rDNA sequence comparisons. J Phycol 2005, 41:887-899.
-
(2005)
J Phycol
, vol.41
, pp. 887-899
-
-
Gontcharov, A.A.1
Melkonian, M.2
-
19
-
-
0031473030
-
Displaying the information contents of structural RNA alignments: the structure logos
-
Gorodkin J, Heyer LJ, Brunak S, Stormo GD. Displaying the information contents of structural RNA alignments: the structure logos. Comput Appl Biosci 1997, 13:583-586.
-
(1997)
Comput Appl Biosci
, vol.13
, pp. 583-586
-
-
Gorodkin, J.1
Heyer, L.J.2
Brunak, S.3
Stormo, G.D.4
-
20
-
-
0026466830
-
Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods
-
Gutell RR, Power A, Hertz GZ, Putz EJ, Stormo GD. Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods. Nucleic Acids Res 1992, 20:5785-5795.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 5785-5795
-
-
Gutell, R.R.1
Power, A.2
Hertz, G.Z.3
Putz, E.J.4
Stormo, G.D.5
-
21
-
-
0036600570
-
The accuracy of ribosomal RNA comparative structure models
-
Gutell RR, Lee JC, Cannone JJ. The accuracy of ribosomal RNA comparative structure models. Curr Opin Struct Biol 2002, 12:301-310.
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 301-310
-
-
Gutell, R.R.1
Lee, J.C.2
Cannone, J.J.3
-
22
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 1999, 41:95-98.
-
(1999)
Nucleic Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
23
-
-
20444468220
-
Taxonomic revision of the European species of the Poecilimon ampliatus-group (Orthoptera Phaneropteridae)
-
Heller K-G, Lehmann A. Taxonomic revision of the European species of the Poecilimon ampliatus-group (Orthoptera Phaneropteridae). Mem Soc Entmol Ital 2004, 82:403-422.
-
(2004)
Mem Soc Entmol Ital
, vol.82
, pp. 403-422
-
-
Heller, K.-G.1
Lehmann, A.2
-
24
-
-
20444461939
-
Systematics and bioacoustics of the Poecilimon sanctipauli-group (Orthoptera: Tettigonioidea: Phaneropteridae)
-
Heller K-G, Sevgili H. Systematics and bioacoustics of the Poecilimon sanctipauli-group (Orthoptera: Tettigonioidea: Phaneropteridae). Eur J Entomol 2005, 102:265-277.
-
(2005)
Eur J Entomol
, vol.102
, pp. 265-277
-
-
Heller, K.-G.1
Sevgili, H.2
-
25
-
-
0030034071
-
Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA
-
Hickson RE, Simon C, Cooper A, Spicer GS, Sullivan J, Penny D. Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA. Mol Biol Evol 1996, 13:150-169.
-
(1996)
Mol Biol Evol
, vol.13
, pp. 150-169
-
-
Hickson, R.E.1
Simon, C.2
Cooper, A.3
Spicer, G.S.4
Sullivan, J.5
Penny, D.6
-
26
-
-
0034522921
-
RNA secondary structure: physical and computational aspects
-
Higgs PG. RNA secondary structure: physical and computational aspects. Q Rev Biophys 2000, 33:199-253.
-
(2000)
Q Rev Biophys
, vol.33
, pp. 199-253
-
-
Higgs, P.G.1
-
27
-
-
0141721420
-
RNA-based phylogenetic methods: application to mammalian mitochondrial RNA sequences
-
Hudelot C, Gowri-Shankar V, Jow H, Rattray M, Higgs PG. RNA-based phylogenetic methods: application to mammalian mitochondrial RNA sequences. Mol Phylogenet Evol 2003, 28:241-252.
-
(2003)
Mol Phylogenet Evol
, vol.28
, pp. 241-252
-
-
Hudelot, C.1
Gowri-Shankar, V.2
Jow, H.3
Rattray, M.4
Higgs, P.G.5
-
28
-
-
0000045446
-
Secondary structure model for the ITS-2 precursor rRNA of strongyloid nematodes of equids: implications for phylogenetic inference
-
Hung G-C, Chilton NB, Beveridge I, Gasser RB. Secondary structure model for the ITS-2 precursor rRNA of strongyloid nematodes of equids: implications for phylogenetic inference. Int J Parasitol 1999, 29:1949-1964.
-
(1999)
Int J Parasitol
, vol.29
, pp. 1949-1964
-
-
Hung, G.-C.1
Chilton, N.B.2
Beveridge, I.3
Gasser, R.B.4
-
29
-
-
3042823867
-
Phylogenetic utility of the ribosomal transcribed spacer 2 in Strumigenys spp (Hymenoptera: Formicidae)
-
Hung Y-T, Chen CA, Wu W-J, Lin C-C, Shih C-J. Phylogenetic utility of the ribosomal transcribed spacer 2 in Strumigenys spp (Hymenoptera: Formicidae). Mol Phylogenet Evol 2004, 32:407-415.
-
(2004)
Mol Phylogenet Evol
, vol.32
, pp. 407-415
-
-
Hung, Y.-T.1
Chen, C.A.2
Wu, W.-J.3
Lin, C.-C.4
Shih, C.-J.5
-
30
-
-
0033485458
-
Ribosomal internal transcribed spacer 2 (ITS2) exhibits a common core of secondary structure in vertebrates and yeast
-
Joseph N, Krauskopf E, Vera MI, Michot B. Ribosomal internal transcribed spacer 2 (ITS2) exhibits a common core of secondary structure in vertebrates and yeast. Nucleic Acids Res 1999, 27:4533-4540.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4533-4540
-
-
Joseph, N.1
Krauskopf, E.2
Vera, M.I.3
Michot, B.4
-
31
-
-
0036728808
-
Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution
-
Jow H, Hudelot C, Rattray M, Higgs PG. Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution. Mol Biol Evol 2002, 19:1591-1601.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1591-1601
-
-
Jow, H.1
Hudelot, C.2
Rattray, M.3
Higgs, P.G.4
-
32
-
-
3242721251
-
Aligned 18S and insect phylogeny
-
Kjer KM. Aligned 18S and insect phylogeny. Syst Biol 2004, 53:506-514.
-
(2004)
Syst Biol
, vol.53
, pp. 506-514
-
-
Kjer, K.M.1
-
33
-
-
0032796501
-
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history
-
Knudsen B, Hein J. RNA secondary structure prediction using stochastic context-free grammars and evolutionary history. Bioinformatics 1999, 15:446-454.
-
(1999)
Bioinformatics
, vol.15
, pp. 446-454
-
-
Knudsen, B.1
Hein, J.2
-
34
-
-
0043123155
-
Pfold: RNA secondary structure prediction using stochastic context-free grammars
-
Knudsen B, Hein J. Pfold: RNA secondary structure prediction using stochastic context-free grammars. Nucleic Acids Res 2003, 31:3423-3428.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3423-3428
-
-
Knudsen, B.1
Hein, J.2
-
35
-
-
0032545179
-
Conserved core structure in the internal transcribed spacer 1 of the Schizosaccharomyces pombe precursor ribosomal RNA
-
Lalev AI, Nazar RN. Conserved core structure in the internal transcribed spacer 1 of the Schizosaccharomyces pombe precursor ribosomal RNA. J Mol Biol 1998, 284:1341-1351.
-
(1998)
J Mol Biol
, vol.284
, pp. 1341-1351
-
-
Lalev, A.I.1
Nazar, R.N.2
-
36
-
-
13744249396
-
A statistical analysis of RNA folding algorithms through thermodynamic parameter perturbation
-
Layton DM, Bundschuh R. A statistical analysis of RNA folding algorithms through thermodynamic parameter perturbation. Nucleic Acids Res 2005, 33:519-524.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 519-524
-
-
Layton, D.M.1
Bundschuh, R.2
-
37
-
-
0344664006
-
Comparative analysis of mt LSU rRNA secondary structures of Odonates: structural variability and phylogenetic signal
-
Misof B, Fleck G. Comparative analysis of mt LSU rRNA secondary structures of Odonates: structural variability and phylogenetic signal. Insect Mol Biol 2003, 12:535-547.
-
(2003)
Insect Mol Biol
, vol.12
, pp. 535-547
-
-
Misof, B.1
Fleck, G.2
-
38
-
-
0035152263
-
Phylogenetic signal and its decay in mitochondrial SSU and LSU rRNA gene fragments of Anisoptera
-
Misof B, Rickert AM, Buckley TR, Fleck G, Sauer KP. Phylogenetic signal and its decay in mitochondrial SSU and LSU rRNA gene fragments of Anisoptera. Mol Biol Evol 2001, 18:27-37.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 27-37
-
-
Misof, B.1
Rickert, A.M.2
Buckley, T.R.3
Fleck, G.4
Sauer, K.P.5
-
39
-
-
33646428355
-
Higher phylogeny of zygaenid moths (Insecta: Lepidoptera) inferred from nuclear and mitochondrial sequence data and the evolution of larval cuticular cavities for chemical defense
-
Niehuis O, Yen S-H, Naumann CM, Misof B. Higher phylogeny of zygaenid moths (Insecta: Lepidoptera) inferred from nuclear and mitochondrial sequence data and the evolution of larval cuticular cavities for chemical defense. Mol Phylogenet Evol 2006a, 39:812-829.
-
(2006)
Mol Phylogenet Evol
, vol.39
, pp. 812-829
-
-
Niehuis, O.1
Yen, S.-H.2
Naumann, C.M.3
Misof, B.4
-
40
-
-
30644463379
-
Identification of evolutionary conserved structural elements in the mt SSU rRNA of Zygaenoidea (Lepidoptera): a comparative sequence analysis
-
Niehuis O, Naumann CM, Misof B. Identification of evolutionary conserved structural elements in the mt SSU rRNA of Zygaenoidea (Lepidoptera): a comparative sequence analysis. Org Divers Evol 2006b, 6:17-32.
-
(2006)
Org Divers Evol
, vol.6
, pp. 17-32
-
-
Niehuis, O.1
Naumann, C.M.2
Misof, B.3
-
41
-
-
35448970223
-
Evolutionary history of the burnet moth genus Zygaena Fabricius, 1775 (Lepidoptera: Zygaenidae) inferred from nuclear and mitochondrial sequence data: phylogeny, host-plant association, wing pattern evolution and historical biogeography
-
Niehuis O, Hofmann A, Naumann CM, Misof B. Evolutionary history of the burnet moth genus Zygaena Fabricius, 1775 (Lepidoptera: Zygaenidae) inferred from nuclear and mitochondrial sequence data: phylogeny, host-plant association, wing pattern evolution and historical biogeography. Biol J Linn Soc Lond 2007, 92:501-520.
-
(2007)
Biol J Linn Soc Lond
, vol.92
, pp. 501-520
-
-
Niehuis, O.1
Hofmann, A.2
Naumann, C.M.3
Misof, B.4
-
42
-
-
0028337036
-
Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct formation of 17S and 26S rRNA
-
van Nues RW, Rientjes JMJ, Van derSande CAFM, Zerp SF, Sluiter C, Venema J, Planta RJ, Raué HA. Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct formation of 17S and 26S rRNA. Nucleic Acids Res 1994, 22:912-919.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 912-919
-
-
van Nues, R.W.1
Rientjes, J.M.J.2
Van derSande, C.A.F.M.3
Zerp, S.F.4
Sluiter, C.5
Venema, J.6
Planta, R.J.7
Raué, H.A.8
-
43
-
-
0029054535
-
Evolutionary conserved structural elements are critical for processing of internal transcribed spacer 2 from Saccharomyces cerevisiae precursor ribosomal RNA
-
van Nues RW, Rientjes JMJ, Morré SA, Mollee E, Planta RJ, Venema J, Raué HA. Evolutionary conserved structural elements are critical for processing of internal transcribed spacer 2 from Saccharomyces cerevisiae precursor ribosomal RNA. J Mol Biol 1995, 250:23-36.
-
(1995)
J Mol Biol
, vol.250
, pp. 23-36
-
-
van Nues, R.W.1
Rientjes, J.M.J.2
Morré, S.A.3
Mollee, E.4
Planta, R.J.5
Venema, J.6
Raué, H.A.7
-
44
-
-
0034667925
-
Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching
-
Page RDM. Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching. Nucleic Acids Res 2000, 28:3839-3845.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3839-3845
-
-
Page, R.D.M.1
-
45
-
-
0035984509
-
Louse (Insecta: Phthiraptera) mitochondrial 12S rRNA secondary structure is highly variable
-
Page RDM, Cruickshank R, Johnson KP. Louse (Insecta: Phthiraptera) mitochondrial 12S rRNA secondary structure is highly variable. Insect Mol Biol 2002, 11:361-369.
-
(2002)
Insect Mol Biol
, vol.11
, pp. 361-369
-
-
Page, R.D.M.1
Cruickshank, R.2
Johnson, K.P.3
-
46
-
-
0000630353
-
Revision der Phaneropterinen-Gattung Poecilimon Fisch. (Orth. Tettigon.)
-
Ramme W. Revision der Phaneropterinen-Gattung Poecilimon Fisch. (Orth. Tettigon.). Mitt Zool Mus Berl 1933, 19:497-575.
-
(1933)
Mitt Zool Mus Berl
, vol.19
, pp. 497-575
-
-
Ramme, W.1
-
47
-
-
0007635663
-
Beiträge zur Kenntnis der palaearktischen Ortopterenfauna (Tettig. u Acrid.). III. Acrid.). III
-
Ramme W. Beiträge zur Kenntnis der palaearktischen Ortopterenfauna (Tettig. u Acrid.). III. Acrid.). III. Mitt Zool Mus Berl 1939, 24:41-149.
-
(1939)
Mitt Zool Mus Berl
, vol.24
, pp. 41-149
-
-
Ramme, W.1
-
48
-
-
33846442377
-
A phylogeographic split in Buxus balearica (Buxaceae) as evidenced by nuclear ribosomal markers: when ITS paralogues are welcome
-
Rosselló JA, Lázaro A, Cosín R, Molins A. A phylogeographic split in Buxus balearica (Buxaceae) as evidenced by nuclear ribosomal markers: when ITS paralogues are welcome. J Mol Evol 2007, 64:143-157.
-
(2007)
J Mol Evol
, vol.64
, pp. 143-157
-
-
Rosselló, J.A.1
Lázaro, A.2
Cosín, R.3
Molins, A.4
-
49
-
-
0035156561
-
RNA sequence evolution with secondary structure constraints: comparison of substitution rate models using maximum-likelihood methods
-
Savill NJ, Hoyle DC, Higgs PG. RNA sequence evolution with secondary structure constraints: comparison of substitution rate models using maximum-likelihood methods. Genetics 2001, 157:399-411.
-
(2001)
Genetics
, vol.157
, pp. 399-411
-
-
Savill, N.J.1
Hoyle, D.C.2
Higgs, P.G.3
-
50
-
-
0028266426
-
Comparative evolutionary analysis of rDNA ITS regions in Drosophila
-
Schlötterer C, Hauser M-T, von Haeseler A, Tautz D. Comparative evolutionary analysis of rDNA ITS regions in Drosophila. Mol Biol Evol 1994, 11:513-522.
-
(1994)
Mol Biol Evol
, vol.11
, pp. 513-522
-
-
Schlötterer, C.1
Hauser, M.-T.2
von Haeseler, A.3
Tautz, D.4
-
51
-
-
0034268836
-
Structure of functionally activated small ribosomal subunit at 3.3 Å resolution
-
Schluenzen F, Tocilj A, Zarivach R, Harms J, Gluehmann M, Janell D, Bashan A, Bartels H, Agmon I, Franceschi F, Yonath A. Structure of functionally activated small ribosomal subunit at 3.3 Å resolution. Cell 2000, 102:615-623.
-
(2000)
Cell
, vol.102
, pp. 615-623
-
-
Schluenzen, F.1
Tocilj, A.2
Zarivach, R.3
Harms, J.4
Gluehmann, M.5
Janell, D.6
Bashan, A.7
Bartels, H.8
Agmon, I.9
Franceschi, F.10
Yonath, A.11
-
52
-
-
0025008168
-
Sequence logos: a new way to display consensus sequences
-
Schneider TD, Stephens RM. Sequence logos: a new way to display consensus sequences. Nucleic Acids Res 1990, 18:6097-6100.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6097-6100
-
-
Schneider, T.D.1
Stephens, R.M.2
-
53
-
-
0028512129
-
A stochastic model and the evolution of autocorrelated DNA sequences
-
Schöniger M, von Haeseler A. A stochastic model and the evolution of autocorrelated DNA sequences. Mol Phylogenet Evol 1994, 3:240-247.
-
(1994)
Mol Phylogenet Evol
, vol.3
, pp. 240-247
-
-
Schöniger, M.1
von Haeseler, A.2
-
54
-
-
15444361843
-
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
-
Schultz J, Maisel S, Gerlach D, Müller T, Wolf M. A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota. RNA 2005, 11:361-364.
-
(2005)
RNA
, vol.11
, pp. 361-364
-
-
Schultz, J.1
Maisel, S.2
Gerlach, D.3
Müller, T.4
Wolf, M.5
-
55
-
-
0028251187
-
Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers
-
Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 1994, 87:651-701.
-
(1994)
Ann Entomol Soc Am
, vol.87
, pp. 651-701
-
-
Simon, C.1
Frati, F.2
Beckenbach, A.3
Crespi, B.4
Liu, H.5
Flook, P.6
-
57
-
-
70350653828
-
Accurate and efficient reconstruction of deep phylogenies from structured RNAs
-
Stocsits RR, Letsch H, Hertel J, Misof B, Stadler PF. Accurate and efficient reconstruction of deep phylogenies from structured RNAs. Nucleic Acids Res 2009, 37:6184-6193.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 6184-6193
-
-
Stocsits, R.R.1
Letsch, H.2
Hertel, J.3
Misof, B.4
Stadler, P.F.5
-
59
-
-
0031574072
-
The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
60
-
-
0025014583
-
Yeast precursor ribosomal RNA. Molecular cloning and probing the higher-order structure of the internal transcribed spacer I by Kethoxal and Dimethylsulfate modification
-
Thweatt R, Lee JC. Yeast precursor ribosomal RNA. Molecular cloning and probing the higher-order structure of the internal transcribed spacer I by Kethoxal and Dimethylsulfate modification. J Mol Biol 1990, 211:305-320.
-
(1990)
J Mol Biol
, vol.211
, pp. 305-320
-
-
Thweatt, R.1
Lee, J.C.2
-
61
-
-
0028874337
-
Neighbor joining and maximum likelihood with RNA sequences: addressing the interdependence of sites
-
Tillier ERM, Collins R. Neighbor joining and maximum likelihood with RNA sequences: addressing the interdependence of sites. Mol Biol Evol 1995, 12:7-15.
-
(1995)
Mol Biol Evol
, vol.12
, pp. 7-15
-
-
Tillier, E.R.M.1
Collins, R.2
-
62
-
-
0034948197
-
Phylogenetic relationships inferred from ribosomal ITS sequences and biogeographic patterns in representatives of the genus Calopteryx (Insecta: Odonata) of the West Mediterranean and adjacent West European zone
-
Weekers PHH, De Jonckheere JF, Dumont HJ. Phylogenetic relationships inferred from ribosomal ITS sequences and biogeographic patterns in representatives of the genus Calopteryx (Insecta: Odonata) of the West Mediterranean and adjacent West European zone. Mol Phylogenet Evol 2001, 20:89-99.
-
(2001)
Mol Phylogenet Evol
, vol.20
, pp. 89-99
-
-
Weekers, P.H.H.1
De Jonckheere, J.F.2
Dumont, H.J.3
-
63
-
-
33749653470
-
Analyses of the ribosomal internal transcribed spacers (ITS) and the 5.8S gene indicate that extremely high rDNA heterogeneity is a unique feature in the scleractinian coral genus Acropora (Scleractinia; Acroporidae)
-
Wei N-WV, Wallace CC, Dai C-F, Pillay KRM, Chen CA. Analyses of the ribosomal internal transcribed spacers (ITS) and the 5.8S gene indicate that extremely high rDNA heterogeneity is a unique feature in the scleractinian coral genus Acropora (Scleractinia; Acroporidae). Zool Stud 2006, 45:404-418.
-
(2006)
Zool Stud
, vol.45
, pp. 404-418
-
-
Wei, N.-W.V.1
Wallace, C.C.2
Dai, C.-F.3
Pillay, K.R.M.4
Chen, C.A.5
-
64
-
-
0026350122
-
Comparison of mitochondrial DNA sequences of seven morphospecies of black flies (Diptera: Simuliidae)
-
Xiong B, Kocher TD. Comparison of mitochondrial DNA sequences of seven morphospecies of black flies (Diptera: Simuliidae). Genome 1991, 34:306-311.
-
(1991)
Genome
, vol.34
, pp. 306-311
-
-
Xiong, B.1
Kocher, T.D.2
-
65
-
-
0025266635
-
Structural analysis of the internal transcribed spacer 2 of the precursor ribosomal RNA from Saccharomyces cerevisiae
-
Yeh L-CC, Lee JC. Structural analysis of the internal transcribed spacer 2 of the precursor ribosomal RNA from Saccharomyces cerevisiae. J Mol Biol 1990, 211:699-712.
-
(1990)
J Mol Biol
, vol.211
, pp. 699-712
-
-
Yeh, L.-C.C.1
Lee, J.C.2
-
66
-
-
0025303096
-
Internal transcribed spacer 1 of the yeast precursor ribosomal RNA. Higher order structure and common structural motifs
-
Yeh L-CC, Thweatt R, Lee JC. Internal transcribed spacer 1 of the yeast precursor ribosomal RNA. Higher order structure and common structural motifs. Biochemistry 1990, 29:5911-5918.
-
(1990)
Biochemistry
, vol.29
, pp. 5911-5918
-
-
Yeh, L.-C.C.1
Thweatt, R.2
Lee, J.C.3
-
67
-
-
0345832215
-
The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: a Drosophila example
-
Young I, Coleman AW. The advantages of the ITS2 region of the nuclear rDNA cistron for analysis of phylogenetic relationships of insects: a Drosophila example. Mol Phylogenet Evol 2004, 30:236-242.
-
(2004)
Mol Phylogenet Evol
, vol.30
, pp. 236-242
-
-
Young, I.1
Coleman, A.W.2
-
68
-
-
0035805213
-
Crystal structure of the ribosome at 5.5 Å resolution
-
Yusupov MM, Yusupova GZ, Baucom A, Lieberman K, Earnest TN, Cate JHD, Noller HF. Crystal structure of the ribosome at 5.5 Å resolution. Science 2001, 292:883-896.
-
(2001)
Science
, vol.292
, pp. 883-896
-
-
Yusupov, M.M.1
Yusupova, G.Z.2
Baucom, A.3
Lieberman, K.4
Earnest, T.N.5
Cate, J.H.D.6
Noller, H.F.7
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