-
1
-
-
0035028769
-
Molecular phylogeny and divergence time estimates for major rodent groups: Evidence from multiple genes
-
Adkins, R.M., Gelke, E.L., Rowe, D., Honeycutt, R.L., 2001. Molecular phylogeny and divergence time estimates for major rodent groups: evidence from multiple genes. Mol. Biol. Evol. 18. 777-791.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 777-791
-
-
Adkins, R.M.1
Gelke, E.L.2
Rowe, D.3
Honeycutt, R.L.4
-
2
-
-
0037062433
-
Mammalian mitogenomic relationships and the root of the eutherian tree
-
Arnason, U., Adegoke, J.A., Bodin, K., Born, E.W., Yuzine, B.E., Gullberg, A., Nilsson, M., Short, V.S., Xu, X., Janke, A., 2002. Mammalian mitogenomic relationships and the root of the eutherian tree. Proc. Natl. Acad. Sci. 99, 8151-8156.
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 8151-8156
-
-
Arnason, U.1
Adegoke, J.A.2
Bodin, K.3
Born, E.W.4
Yuzine, B.E.5
Gullberg, A.6
Nilsson, M.7
Short, V.S.8
Xu, X.9
Janke, A.10
-
3
-
-
2942571539
-
The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
-
14 co-authors
-
Cannone, J.J., Subramanian, S., Schnare, M.N., et al., 2002. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BioMed. Central Bioinformat. 3, 2 (14 co-authors).
-
(2002)
BioMed. Central Bioinformat.
, vol.3
, pp. 2
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
-
4
-
-
0034707203
-
Interordinal relationships and timescale of eutherian evolution as inferred from mitochondrial genome data
-
Cao, Y., Fujiwara, M., Nikaido, M., Okada, N., Hasegawa, M., 2000. Interordinal relationships and timescale of eutherian evolution as inferred from mitochondrial genome data. Gene 259, 149-158.
-
(2000)
Gene
, vol.259
, pp. 149-158
-
-
Cao, Y.1
Fujiwara, M.2
Nikaido, M.3
Okada, N.4
Hasegawa, M.5
-
5
-
-
0033959807
-
Mitochondrial genes and mammalian phylogenies: Increasing the reliability of branch length estimation
-
Corneli, P.S., Ward, R.H., 2000. Mitochondrial genes and mammalian phylogenies: increasing the reliability of branch length estimation. Mol. Biol. Evol. 17, 224-234.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 224-234
-
-
Corneli, P.S.1
Ward, R.H.2
-
6
-
-
0036187779
-
Conserved primers for rapid sequencing of the complete mitochondrial genome from carnivores, applied to three species of bears
-
Delisle, I., Strobeck, C., 2002. Conserved primers for rapid sequencing of the complete mitochondrial genome from carnivores, applied to three species of bears. Mol. Biol. Evol. 19, 357-361.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 357-361
-
-
Delisle, I.1
Strobeck, C.2
-
7
-
-
0036792101
-
Molecular phylogeny of living Xenarthrans and the impact of character and taxon sampling on the placental tree rooting
-
Delsuc, F., Scally, M., Madsen, O., Stanhope, M.J., de Jong, W.W., Catzeflis, M., Springer, M.S., Douzery, J.P., 2002. Molecular phylogeny of living Xenarthrans and the impact of character and taxon sampling on the placental tree rooting. Mol. Biol. Evol. 19, 1656-1671.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1656-1671
-
-
Delsuc, F.1
Scally, M.2
Madsen, O.3
Stanhope, M.J.4
De Jong, W.W.5
Catzeflis, M.6
Springer, M.S.7
Douzery, J.P.8
-
8
-
-
0029993941
-
The guinea-pig is not a rodent
-
D'Erchia, A.M., Gissi, C., Pesole, G., Saccone, C., Arnason, U., 1996. The guinea-pig is not a rodent. Nature 381, 597-600.
-
(1996)
Nature
, vol.381
, pp. 597-600
-
-
D'Erchia, A.M.1
Gissi, C.2
Pesole, G.3
Saccone, C.4
Arnason, U.5
-
9
-
-
0000122573
-
PHYLIP (phylogeny inference package). Version 3.2
-
Felsenstein, J.P., 1989. PHYLIP (phylogeny inference package). Version 3.2. Cladistics 5, 164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.P.1
-
10
-
-
0031020582
-
Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria
-
Foster, P.G., Jermiin, L.S., Hickey, D.A., 1997. Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria. J. Mol. Evol. 44, 282-288.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 282-288
-
-
Foster, P.G.1
Jermiin, L.S.2
Hickey, D.A.3
-
11
-
-
0028873063
-
Monophyly of the order Rodentia inferred from mitochondrial DNA sequences of the genes for 12S rRNA, 16S rRNA, and tRNA-Valine
-
Frye, M.S., Hedges, S.B., 1995. Monophyly of the order Rodentia inferred from mitochondrial DNA sequences of the genes for 12S rRNA, 16S rRNA, and tRNA-Valine. Mol. Biol. Evol. 12, 168-176.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 168-176
-
-
Frye, M.S.1
Hedges, S.B.2
-
12
-
-
0033084945
-
Stability of cladistic relationships between Cetacea and other higher level artiodactyl taxa
-
Gatesy, J., Milinkovitch, M., Waddell, V., Stanhope, M., 1999. Stability of cladistic relationships between Cetacea and other higher level artiodactyl taxa. Syst. Biol. 48, 6-20.
-
(1999)
Syst. Biol.
, vol.48
, pp. 6-20
-
-
Gatesy, J.1
Milinkovitch, M.2
Waddell, V.3
Stanhope, M.4
-
13
-
-
0001791833
-
Comparative sequence analysis and the structure of 16S and 23S RNA
-
Zimmermann, R.A., Dahlberg, A.E. (Eds.), CRC Press, Boca Raton
-
Gutell, R.R., 1996. Comparative sequence analysis and the structure of 16S and 23S RNA. In: Zimmermann, R.A., Dahlberg, A.E. (Eds.), Ribosomal RNA: Structure, Evolution, Processing, and Function in Protein Biosynthesis. CRC Press, Boca Raton, pp. 15-27.
-
(1996)
Ribosomal RNA: Structure, Evolution, Processing, and Function in Protein Biosynthesis
, pp. 15-27
-
-
Gutell, R.R.1
-
14
-
-
0033735040
-
Search for characteristic structural features of mammalian mitochondrial tRNAs
-
Helm, M., Brulé, H., Friede, D., Giegé, R., Pütz, D., Florentz, C., 2000. Search for characteristic structural features of mammalian mitochondrial tRNAs. RNA 6, 1356-1379.
-
(2000)
RNA
, vol.6
, pp. 1356-1379
-
-
Helm, M.1
Brulé, H.2
Friede, D.3
Giegé, R.4
Pütz, D.5
Florentz, C.6
-
15
-
-
4243559860
-
Compensatory neutral mutations and the evolution of RNA
-
Higgs, P.G., 1998. Compensatory neutral mutations and the evolution of RNA. Genetica 102/103, 91-101.
-
(1998)
Genetica
, vol.102-103
, pp. 91-101
-
-
Higgs, P.G.1
-
16
-
-
0034522921
-
RNA secondary structure: Physical and computational aspects
-
Higgs, P.G., 2000. RNA secondary structure: physical and computational aspects. Quart. Rev. Biophys. 33, 199-253.
-
(2000)
Quart. Rev. Biophys.
, vol.33
, pp. 199-253
-
-
Higgs, P.G.1
-
17
-
-
0035986875
-
Rodent phylogeny and a timescale for the evolution of Glires: Evidence from an extensive taxon sampling using three nuclear genes
-
Huchon, D., Madsen, O., Sibbald, M.J.J.B., Ament, K., Stanhope, M.J., Catzeflis, F., de Jong, W.W., Douzery, E.J.P., 2002. Rodent phylogeny and a timescale for the evolution of Glires: evidence from an extensive taxon sampling using three nuclear genes. Mol. Biol. Evol. 19, 1053-1065.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1053-1065
-
-
Huchon, D.1
Madsen, O.2
Sibbald, M.J.J.B.3
Ament, K.4
Stanhope, M.J.5
Catzeflis, F.6
De Jong, W.W.7
Douzery, E.J.P.8
-
18
-
-
0035861456
-
Bayesian inference of phylogeny and its impact on evolutionary biology
-
Huelsenbeck, J.P., Ronquist, F., Nielsen, R., Bollback, J.P., 2001. Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294, 2310-2314.
-
(2001)
Science
, vol.294
, pp. 2310-2314
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
Nielsen, R.3
Bollback, J.P.4
-
19
-
-
0037248815
-
OGRe: A relational database for comparative analysis of mitochondrial genomes
-
Jameson, D., Gibson, A.P., Hudelot, C., Higgs, P.G., 2003. OGRe: a relational database for comparative analysis of mitochondrial genomes. Nucleic Acids Res. 31, 202-206. Available from 〈http://www.bioinf.man.ac.uk/ ogre〉.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 202-206
-
-
Jameson, D.1
Gibson, A.P.2
Hudelot, C.3
Higgs, P.G.4
-
20
-
-
0036133006
-
Phylogenetic analysis of 18S rRNA and the mitochondrial genomes of the wombat, Vombatus ursinus, and the spiny anteater, Tachyglossus aculeatus: Increased support for the Marsupionta hypothesis
-
Janke, A., Magnell, O., Wieczorek, G., Westerman, M., Arnason, U., 2002. Phylogenetic analysis of 18S rRNA and the mitochondrial genomes of the wombat, Vombatus ursinus, and the spiny anteater, Tachyglossus aculeatus: increased support for the Marsupionta hypothesis. J. Mol. Evol. 54, 71-80.
-
(2002)
J. Mol. Evol.
, vol.54
, pp. 71-80
-
-
Janke, A.1
Magnell, O.2
Wieczorek, G.3
Westerman, M.4
Arnason, U.5
-
21
-
-
0036728808
-
Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution
-
Jow, H., Hudelot, C., Rattray, M., Higgs, P.G., 2002. Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution. Mol. Biol. Evol. 19, 1591-1601.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1591-1601
-
-
Jow, H.1
Hudelot, C.2
Rattray, M.3
Higgs, P.G.4
-
22
-
-
52449148668
-
The role of compensatory neutral mutations in molecular evolution
-
Kimura, M., 1985. The role of compensatory neutral mutations in molecular evolution. J. Genet. 64, 7-19.
-
(1985)
J. Genet.
, vol.64
, pp. 7-19
-
-
Kimura, M.1
-
23
-
-
0030253472
-
Interordinal mammalian relationships: Evidence for Paenungulate monophyly is provided by complete mitochondrial 12S rRNA sequences
-
Lavergne, A., Douzery, E., Stichler, T., Catzeflis, F.M., Springer, M.S., 1996. Interordinal mammalian relationships: evidence for Paenungulate monophyly is provided by complete mitochondrial 12S rRNA sequences. Mol. Phylogenet. Evol. 6, 245-258.
-
(1996)
Mol. Phylogenet. Evol.
, vol.6
, pp. 245-258
-
-
Lavergne, A.1
Douzery, E.2
Stichler, T.3
Catzeflis, F.M.4
Springer, M.S.5
-
24
-
-
0035145155
-
Phylogenetic systematics turns over a new leaf
-
Lewis, P.O., 2001. Phylogenetic systematics turns over a new leaf. Trends Ecol. Evol. 16, 30-37.
-
(2001)
Trends Ecol. Evol.
, vol.16
, pp. 30-37
-
-
Lewis, P.O.1
-
25
-
-
0037055264
-
Pika and vole mitochondrial genomes increase support for both rodent monophyly and glires
-
Lin, Y.-H., Waddell, P.J., Penny, D., 2002a. Pika and vole mitochondrial genomes increase support for both rodent monophyly and glires. Gene 294, 119-129.
-
(2002)
Gene
, vol.294
, pp. 119-129
-
-
Lin, Y.-H.1
Waddell, P.J.2
Penny, D.3
-
26
-
-
0036897677
-
Four new mitochondrial genomes and the increased stability of evolutionary trees of mammals from improved taxon sampling
-
Lin, Y.-H., McLenachan, P.A., Gore, A.R., Phillips, M.J., Ota, R., Hendy, M.D., Penny, D., 2002b. Four new mitochondrial genomes and the increased stability of evolutionary trees of mammals from improved taxon sampling. Mol. Biol. Evol. 19, 2060-2070.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 2060-2070
-
-
Lin, Y.-H.1
McLenachan, P.A.2
Gore, A.R.3
Phillips, M.J.4
Ota, R.5
Hendy, M.D.6
Penny, D.7
-
27
-
-
0035252569
-
Parallel adaptive radiations in two major clades of placental mammals
-
Madsen, O., Scally, M., Douady, C.J., Kao, D.J., DeBry, R.W., Adkins, R., Amrine, H.M., Stanhope, M.J., de Jong, W., Springer, M.S., 2001. Parallel adaptive radiations in two major clades of placental mammals. Nature 409, 610-614.
-
(2001)
Nature
, vol.409
, pp. 610-614
-
-
Madsen, O.1
Scally, M.2
Douady, C.J.3
Kao, D.J.4
DeBry, R.W.5
Adkins, R.6
Amrine, H.M.7
Stanhope, M.J.8
De Jong, W.9
Springer, M.S.10
-
28
-
-
0033844505
-
The evolution of base composition and phylogenetic inference
-
Mooers, A.O., Holmes, E.C., 2000. The evolution of base composition and phylogenetic inference. TREE 15, 365-369.
-
(2000)
TREE
, vol.15
, pp. 365-369
-
-
Mooers, A.O.1
Holmes, E.C.2
-
29
-
-
0035252080
-
Molecular phylogenetics and the origins of placental mammals
-
Murphy, W.J., Eizirik, E., Johnson, W.E., Zhang, Y.P., Ryder, A., O'Brien, S.J., 2001a. Molecular phylogenetics and the origins of placental mammals. Nature 409, 614-618.
-
(2001)
Nature
, vol.409
, pp. 614-618
-
-
Murphy, W.J.1
Eizirik, E.2
Johnson, W.E.3
Zhang, Y.P.4
Ryder, A.5
O'Brien, S.J.6
-
30
-
-
0035861441
-
Resolution of the early placental mammal radiation using Bayesian phylogenetics
-
Murphy, W.J., Eizirik, E., O'Brien, S.J., Madsen, O., Scally, M., Douady, C.J., Teeling, E., Ryder, O.A., Stanhope, M.J., de Jong, W.W., Springer, M.S., 2001b. Resolution of the early placental mammal radiation using Bayesian phylogenetics. Science 294, 2348-2351.
-
(2001)
Science
, vol.294
, pp. 2348-2351
-
-
Murphy, W.J.1
Eizirik, E.2
O'Brien, S.J.3
Madsen, O.4
Scally, M.5
Douady, C.J.6
Teeling, E.7
Ryder, O.A.8
Stanhope, M.J.9
De Jong, W.W.10
Springer, M.S.11
-
31
-
-
0028900996
-
Evolutionary analyses of DNA sequences subject to constraints on secondary structure
-
Muse, S., 1995. Evolutionary analyses of DNA sequences subject to constraints on secondary structure. Genetics 139, 1429-1439.
-
(1995)
Genetics
, vol.139
, pp. 1429-1439
-
-
Muse, S.1
-
32
-
-
0003677357
-
-
Blackwell Science, Oxford
-
Page, R.D.M., Holmes, E., 1998. Molecular Evolution, A Phylogenetic Approach. Blackwell Science, Oxford.
-
(1998)
Molecular Evolution, A Phylogenetic Approach
-
-
Page, R.D.M.1
Holmes, E.2
-
33
-
-
0033085036
-
Mammalian evolution: Timing and implications from using the logdeterminant transform for proteins of differing amino acid composition
-
Penny, D., Hasegawa, M., Waddell, P.J., Hendy, M.D., 1999. Mammalian evolution: timing and implications from using the logdeterminant transform for proteins of differing amino acid composition. Syst. Biol. 48, 76-93.
-
(1999)
Syst. Biol.
, vol.48
, pp. 76-93
-
-
Penny, D.1
Hasegawa, M.2
Waddell, P.J.3
Hendy, M.D.4
-
34
-
-
0031301965
-
Rodent monophyly: Pitfalls of molecular phylogenies
-
Philippe, H., 1997. Rodent monophyly: pitfalls of molecular phylogenies. J. Mol. Evol. 45, 712-715.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 712-715
-
-
Philippe, H.1
-
35
-
-
0030076123
-
Evidence on mammalian phylogeny from sequences of exon 28 of the von Willebrand factor gene
-
Porter, C.A., Goodman, M., Stanhope, M.J., 1996. Evidence on mammalian phylogeny from sequences of exon 28 of the von Willebrand factor gene. Mol. Phylogenet. Evol. 5, 89-101.
-
(1996)
Mol. Phylogenet. Evol.
, vol.5
, pp. 89-101
-
-
Porter, C.A.1
Goodman, M.2
Stanhope, M.J.3
-
36
-
-
0029091043
-
Estimating substitution rates in ribosomal RNA genes
-
Rzhetsky, A., 1995, Estimating substitution rates in ribosomal RNA genes. Genetics 141, 771-783.
-
(1995)
Genetics
, vol.141
, pp. 771-783
-
-
Rzhetsky, A.1
-
37
-
-
0037029128
-
Mitochondrial DNA in metazoa: Degree of freedom in a frozen event
-
Saccone, C., Gissi, C., Reyes, A., Larizza, A., Sbisa, E., Pesole, G., 2002. Mitochondrial DNA in metazoa: degree of freedom in a frozen event. Gene 186, 3-12.
-
(2002)
Gene
, vol.186
, pp. 3-12
-
-
Saccone, C.1
Gissi, C.2
Reyes, A.3
Larizza, A.4
Sbisa, E.5
Pesole, G.6
-
38
-
-
0035156561
-
RNA sequence evolution with secondary structure constraints: Comparison of substitution rate models using maximum likelihood methods
-
Savill, N.J., Hoyle, D.C., Higgs, P.G., 2001. RNA sequence evolution with secondary structure constraints: comparison of substitution rate models using maximum likelihood methods. Genetics 157, 399-411.
-
(2001)
Genetics
, vol.157
, pp. 399-411
-
-
Savill, N.J.1
Hoyle, D.C.2
Higgs, P.G.3
-
39
-
-
0033858988
-
The complete mitochondrial genome of Tupaia belangeri and the phylogenetic affiliation of Scandentia to other Eutherian orders
-
Schmitz, J., Ohme, M., Zischler, H., 2000. The complete mitochondrial genome of Tupaia belangeri and the phylogenetic affiliation of Scandentia to other Eutherian orders. Mol. Biol. Evol. 17, 1334-1343.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1334-1343
-
-
Schmitz, J.1
Ohme, M.2
Zischler, H.3
-
40
-
-
0035108258
-
SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates
-
Schmitz, J., Ohme, M., Zischler, H., 2001. SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates. Genetics 157, 777-784.
-
(2001)
Genetics
, vol.157
, pp. 777-784
-
-
Schmitz, J.1
Ohme, M.2
Zischler, H.3
-
41
-
-
0036220666
-
The complete mitochondrial sequence of Tarsius bancanus: Evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA
-
Schmitz, J., Ohme, M., Zischler, H., 2002. The complete mitochondrial sequence of Tarsius bancanus: evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA. Mol. Biol. Evol. 19, 544-553.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 544-553
-
-
Schmitz, J.1
Ohme, M.2
Zischler, H.3
-
42
-
-
0028512129
-
A stochastic model for the evolution of autocorrelated DNA sequences
-
Schöniger, M., von Haeseler, A., 1994. A stochastic model for the evolution of autocorrelated DNA sequences. Mol. Phylogenet. Evol. 3, 240-247.
-
(1994)
Mol. Phylogenet. Evol.
, vol.3
, pp. 240-247
-
-
Schöniger, M.1
Von Haeseler, A.2
-
43
-
-
0028834744
-
Compensatory substitutions and the evolution of the mitochondrial 12S rRNA gene in mammals
-
Springer, M.S., Hollar, L.J., Burk, A., 1995. Compensatory substitutions and the evolution of the mitochondrial 12S rRNA gene in mammals. Mol. Biol. Evol. 12, 1138-1150.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 1138-1150
-
-
Springer, M.S.1
Hollar, L.J.2
Burk, A.3
-
44
-
-
0033085041
-
Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition
-
Springer, M.S., Amrine, H.M., Burk, A., Stanhope, M.J., 1999. Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition. Syst. Biol. 48, 65-75.
-
(1999)
Syst. Biol.
, vol.48
, pp. 65-75
-
-
Springer, M.S.1
Amrine, H.M.2
Burk, A.3
Stanhope, M.J.4
-
45
-
-
0032544017
-
Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals
-
Stanhope, M.J., Waddell, V.G., Madsen, O., de Jong, W., Hedges, S.B., Cleven, G.C., Kao, D., Springer, M.S., 1998. Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals. Proc. Natl. Acad. Sci. 95, 9967-9972.
-
(1998)
Proc. Natl. Acad. Sci.
, vol.95
, pp. 9967-9972
-
-
Stanhope, M.J.1
Waddell, V.G.2
Madsen, O.3
De Jong, W.4
Hedges, S.B.5
Cleven, G.C.6
Kao, D.7
Springer, M.S.8
-
46
-
-
0029784930
-
The rate of compensatory evolution
-
Stephan, W., 1996. The rate of compensatory evolution. Genetics 144, 419-426.
-
(1996)
Genetics
, vol.144
, pp. 419-426
-
-
Stephan, W.1
-
47
-
-
0037058983
-
Overcredibility of molecular phylogenetics obtained by Bayesian phylogenetics
-
Suzuki, Y., Glazko, G. V., Nei, M., 2002. Overcredibility of molecular phylogenetics obtained by Bayesian phylogenetics. Proc. Natl. Acad. Sci. USA 99, 16138-16143.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 16138-16143
-
-
Suzuki, Y.1
Glazko, G.V.2
Nei, M.3
-
48
-
-
0028874337
-
Neighbour joining and maximum likelihood with RNA sequences: Addressing the interdependence of sites
-
Tillier, E.R.M., Collins, R.A., 1995. Neighbour joining and maximum likelihood with RNA sequences: addressing the interdependence of sites. Mol. Biol. Evol. 12, 7-15.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 7-15
-
-
Tillier, E.R.M.1
Collins, R.A.2
-
49
-
-
0031894830
-
High apparent rate of simultaneous compensatory base-pair substitutions in ribosomal RNA
-
Tillier, E.R.M., Collins, R.A., 1998. High apparent rate of simultaneous compensatory base-pair substitutions in ribosomal RNA. Genetics 148, 1993-2002.
-
(1998)
Genetics
, vol.148
, pp. 1993-2002
-
-
Tillier, E.R.M.1
Collins, R.A.2
-
50
-
-
0033084970
-
Using novel phylogenetic methods to evaluate mammalian mtDNA,including amino acid-invariant sites-logdet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant
-
Waddell, P.J., Cao, Y., Hauf, J., Hasegawa, M., 1999a. Using novel phylogenetic methods to evaluate mammalian mtDNA,including amino acid-invariant sites-logdet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant. Syst. Biol. 48, 31-53.
-
(1999)
Syst. Biol.
, vol.48
, pp. 31-53
-
-
Waddell, P.J.1
Cao, Y.2
Hauf, J.3
Hasegawa, M.4
-
51
-
-
0033085002
-
Towards resolving the interordinal relationships of placental mammals
-
Waddell, P.J., Okada, N., Hasegawa, M., 1999b. Towards resolving the interordinal relationships of placental mammals. Syst. Biol. 48, 1-5.
-
(1999)
Syst. Biol.
, vol.48
, pp. 1-5
-
-
Waddell, P.J.1
Okada, N.2
Hasegawa, M.3
-
52
-
-
0036431235
-
Bayesian phylogenetics of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support
-
Wilcox, T.P., Zwickl, D.J., Heath, T.A., Hillis, D.M., 2002. Bayesian phylogenetics of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support. Mol. Phylogenet. Evol. 25, 361-371.
-
(2002)
Mol. Phylogenet. Evol.
, vol.25
, pp. 361-371
-
-
Wilcox, T.P.1
Zwickl, D.J.2
Heath, T.A.3
Hillis, D.M.4
-
53
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
Yang, Z., 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39, 306-314.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 306-314
-
-
Yang, Z.1
|