-
1
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors.
-
1464427, 16056220
-
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Irzyk GP, Jando SC, Alenquer ML, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, et al. Genome sequencing in microfabricated high-density picolitre reactors. Nature 2005, 437:376-380. 1464427, 16056220.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
more..
-
2
-
-
0013872925
-
Studies of the cultivable flora of normal human feces.
-
10.1007/BF02097463, 5296851
-
Van Houte J, Gibbons RJ. Studies of the cultivable flora of normal human feces. Antonie Van Leeuwenhoek 1966, 32:212-222. 10.1007/BF02097463, 5296851.
-
(1966)
Antonie Van Leeuwenhoek
, vol.32
, pp. 212-222
-
-
Van Houte, J.1
Gibbons, R.J.2
-
3
-
-
35348968286
-
The human microbiome project.
-
10.1038/nature06244, 17943116
-
Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI. The human microbiome project. Nature 2007, 449:804-810. 10.1038/nature06244, 17943116.
-
(2007)
Nature
, vol.449
, pp. 804-810
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Hamady, M.3
Fraser-Liggett, C.M.4
Knight, R.5
Gordon, J.I.6
-
4
-
-
20544444045
-
Diversity of the human intestinal microbial flora.
-
10.1126/science.1110591, 1395357, 15831718
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, Gill SR, Nelson KE, Relman DA. Diversity of the human intestinal microbial flora. Science 2005, 308:1635-1638. 10.1126/science.1110591, 1395357, 15831718.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
Sargent, M.6
Gill, S.R.7
Nelson, K.E.8
Relman, D.A.9
-
5
-
-
56649124715
-
The influence of sex, handedness, and washing on the diversity of hand surface bacteria.
-
10.1073/pnas.0807920105, 2584711, 19004758
-
Fierer N, Hamady M, Lauber CL, Knight R. The influence of sex, handedness, and washing on the diversity of hand surface bacteria. Proc Natl Acad Sci USA 2008, 105:17994-17999. 10.1073/pnas.0807920105, 2584711, 19004758.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 17994-17999
-
-
Fierer, N.1
Hamady, M.2
Lauber, C.L.3
Knight, R.4
-
6
-
-
58749112734
-
A core gut microbiome in obese and lean twins.
-
10.1038/nature07540, 2677729, 19043404
-
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI. A core gut microbiome in obese and lean twins. Nature 2009, 457:480-484. 10.1038/nature07540, 2677729, 19043404.
-
(2009)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
Ley, R.E.6
Sogin, M.L.7
Jones, W.J.8
Roe, B.A.9
Affourtit, J.P.10
Egholm, M.11
Henrissat, B.12
Heath, A.C.13
Knight, R.14
Gordon, J.I.15
-
7
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing.
-
10.1038/nature08821, 20203603
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, Mende DR, Li J, Xu J, Li S, Li D, Cao J, Wang B, Liang H, Zheng H, Xie Y, Tap J, Lepage P, Bertalan M, Batto JM, Hansen T, Le Paslier D, Linneberg A, Nielsen HB, Pelletier E, Renault P, et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464:59-65. 10.1038/nature08821, 20203603.
-
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
Mende, D.R.11
Li, J.12
Xu, J.13
Li, S.14
Li, D.15
Cao, J.16
Wang, B.17
Liang, H.18
Zheng, H.19
Xie, Y.20
Tap, J.21
Lepage, P.22
Bertalan, M.23
Batto, J.M.24
Hansen, T.25
Le Paslier, D.26
Linneberg, A.27
Nielsen, H.B.28
Pelletier, E.29
Renault, P.30
more..
-
8
-
-
67650021209
-
Microbial community profiling for human microbiome projects: Tools, techniques, and challenges.
-
10.1101/gr.085464.108, 19383763
-
Hamady M, Knight R. Microbial community profiling for human microbiome projects: Tools, techniques, and challenges. Genome Res 2009, 19:1141-1152. 10.1101/gr.085464.108, 19383763.
-
(2009)
Genome Res
, vol.19
, pp. 1141-1152
-
-
Hamady, M.1
Knight, R.2
-
9
-
-
0034782218
-
Ecologically meaningful transformations for ordinations of species data.
-
Legendre P, Gallagher ED. Ecologically meaningful transformations for ordinations of species data. Oecologia 2001, 129:271-280.
-
(2001)
Oecologia
, vol.129
, pp. 271-280
-
-
Legendre, P.1
Gallagher, E.D.2
-
10
-
-
44849128805
-
Species divergence and the measurement of microbial diversity.
-
10.1111/j.1574-6976.2008.00111.x, 2443784, 18435746
-
Lozupone CA, Knight R. Species divergence and the measurement of microbial diversity. FEMS Microbiol Rev 2008, 32:557-578. 10.1111/j.1574-6976.2008.00111.x, 2443784, 18435746.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 557-578
-
-
Lozupone, C.A.1
Knight, R.2
-
12
-
-
0036324293
-
Phylogenetic approaches for describing and comparing the diversity of microbial communities.
-
10.1128/AEM.68.8.3673-3682.2002, 124012, 12147459
-
Martin AP. Phylogenetic approaches for describing and comparing the diversity of microbial communities. Appl Environ Microbiol 2002, 68:3673-3682. 10.1128/AEM.68.8.3673-3682.2002, 124012, 12147459.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 3673-3682
-
-
Martin, A.P.1
-
13
-
-
23344442120
-
Obesity alters gut microbial ecology.
-
10.1073/pnas.0504978102, 1176910, 16033867
-
Ley RE, Backhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. Obesity alters gut microbial ecology. Proc Natl Acad Sci USA 2005, 102:11070-11075. 10.1073/pnas.0504978102, 1176910, 16033867.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11070-11075
-
-
Ley, R.E.1
Backhed, F.2
Turnbaugh, P.3
Lozupone, C.A.4
Knight, R.D.5
Gordon, J.I.6
-
14
-
-
33845901507
-
Microbial ecology: human gut microbes associated with obesity.
-
10.1038/4441022a, 17183309
-
Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature 2006, 444:1022-1023. 10.1038/4441022a, 17183309.
-
(2006)
Nature
, vol.444
, pp. 1022-1023
-
-
Ley, R.E.1
Turnbaugh, P.J.2
Klein, S.3
Gordon, J.I.4
-
15
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest.
-
10.1038/nature05414, 17183312
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 2006, 444:1027-1031. 10.1038/nature05414, 17183312.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
Gordon, J.I.6
-
16
-
-
72949091232
-
Bacterial Community variation in human body habitats across space and time.
-
10.1126/science.1177486, 19892944
-
Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Bacterial Community variation in human body habitats across space and time. Science 2009, 326:1694-1697. 10.1126/science.1177486, 19892944.
-
(2009)
Science
, vol.326
, pp. 1694-1697
-
-
Costello, E.K.1
Lauber, C.L.2
Hamady, M.3
Fierer, N.4
Gordon, J.I.5
Knight, R.6
-
17
-
-
77950904616
-
Forensic identification using skin bacterial communities.
-
10.1073/pnas.1000162107, 20231444
-
Fierer N, Lauber CL, Zhou N, McDonald D, Costello EK, Knight R. Forensic identification using skin bacterial communities. Proc Natl Acad Sci USA 2010, 107:6477-6481. 10.1073/pnas.1000162107, 20231444.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 6477-6481
-
-
Fierer, N.1
Lauber, C.L.2
Zhou, N.3
McDonald, D.4
Costello, E.K.5
Knight, R.6
-
18
-
-
66349083859
-
Topographical and temporal diversity of the human skin microbiome.
-
10.1126/science.1171700, 19478181, NISC Comparative Sequencing Program
-
Grice EA, Kong HH, Conlan S, Deming CB, Davis J, Young AC, Bouffard GG, Blakesley RW, Murray PR, Green ED, Turner ML, Segre JA. NISC Comparative Sequencing Program Topographical and temporal diversity of the human skin microbiome. Science 2009, 324:1190-1192. 10.1126/science.1171700, 19478181, NISC Comparative Sequencing Program.
-
(2009)
Science
, vol.324
, pp. 1190-1192
-
-
Grice, E.A.1
Kong, H.H.2
Conlan, S.3
Deming, C.B.4
Davis, J.5
Young, A.C.6
Bouffard, G.G.7
Blakesley, R.W.8
Murray, P.R.9
Green, E.D.10
Turner, M.L.11
Segre, J.A.12
-
19
-
-
8144226856
-
The gut microbiota as an environmental factor that regulates fat storage.
-
10.1073/pnas.0407076101, 524219, 15505215
-
Backhed F, Ding H, Wang T, Hooper LV, Koh GY, Nagy A, Semenkovich CF, Gordon JI. The gut microbiota as an environmental factor that regulates fat storage. Proc Natl Acad Sci USA 2004, 101:15718-15723. 10.1073/pnas.0407076101, 524219, 15505215.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 15718-15723
-
-
Backhed, F.1
Ding, H.2
Wang, T.3
Hooper, L.V.4
Koh, G.Y.5
Nagy, A.6
Semenkovich, C.F.7
Gordon, J.I.8
-
20
-
-
74249119678
-
Obesity and the human microbiome.
-
10.1097/MOG.0b013e328333d751, 19901833
-
Ley RE. Obesity and the human microbiome. Curr Opin Gastroenterol 26:5-11. 10.1097/MOG.0b013e328333d751, 19901833.
-
Curr Opin Gastroenterol
, vol.26
, pp. 5-11
-
-
Ley, R.E.1
-
21
-
-
76649140502
-
Soil microbial community responses to multiple experimental climate change drivers.
-
10.1128/AEM.02874-09, 20023089
-
Castro HF, Classen AT, Austin EE, Norby RJ, Schadt CW. Soil microbial community responses to multiple experimental climate change drivers. Appl Environ Microbiol 2010, 76:999-1007. 10.1128/AEM.02874-09, 20023089.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 999-1007
-
-
Castro, H.F.1
Classen, A.T.2
Austin, E.E.3
Norby, R.J.4
Schadt, C.W.5
-
22
-
-
56649085249
-
Environmental and anthropogenic controls over bacterial communities in wetland soils.
-
10.1073/pnas.0808254105, 2584698, 19004771
-
Hartman WH, Richardson CJ, Vilgalys R, Bruland GL. Environmental and anthropogenic controls over bacterial communities in wetland soils. Proc Natl Acad Sci USA 2008, 105:17842-17847. 10.1073/pnas.0808254105, 2584698, 19004771.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 17842-17847
-
-
Hartman, W.H.1
Richardson, C.J.2
Vilgalys, R.3
Bruland, G.L.4
-
23
-
-
69449093705
-
Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline.
-
10.1128/AEM.02220-08, 2737922, 19617391
-
Rettedal E, Vilain S, Lindblom S, Lehnert K, Scofield C, George S, Clay S, Kaushik RS, Rosa AJ, Francis D, Brözel VS. Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline. Appl Environ Microbiol 2009, 75:5489-5495. 10.1128/AEM.02220-08, 2737922, 19617391.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5489-5495
-
-
Rettedal, E.1
Vilain, S.2
Lindblom, S.3
Lehnert, K.4
Scofield, C.5
George, S.6
Clay, S.7
Kaushik, R.S.8
Rosa, A.J.9
Francis, D.10
Brözel, V.S.11
-
24
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing.
-
10.1371/journal.pbio.0060280, 2586385, 19018661
-
Dethlefsen L, Huse S, Sogin ML, Relman DA. The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 2008, 6:e280. 10.1371/journal.pbio.0060280, 2586385, 19018661.
-
(2008)
PLoS Biol
, vol.6
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
25
-
-
34547129847
-
Development of the human infant intestinal microbiota.
-
10.1371/journal.pbio.0050177, 1896187,1896187, 17594176
-
Palmer C, Bik EM, Digiulio DB, Relman DA, Brown PO. Development of the human infant intestinal microbiota. PLoS Biol 2007, 5:e177. 10.1371/journal.pbio.0050177, 1896187,1896187, 17594176.
-
(2007)
PLoS Biol
, vol.5
-
-
Palmer, C.1
Bik, E.M.2
Digiulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
26
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities.
-
10.1128/AEM.71.12.8228-8235.2005, 1317376, 16332807
-
Lozupone C, Knight R. UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 2005, 71:8228-8235. 10.1128/AEM.71.12.8228-8235.2005, 1317376, 16332807.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
28
-
-
33645053483
-
Distance-based tests for homogeneity of multivariate dispersions.
-
10.1111/j.1541-0420.2005.00440.x, 16542252
-
Anderson MJ. Distance-based tests for homogeneity of multivariate dispersions. Biometrics 2006, 62:245-253. 10.1111/j.1541-0420.2005.00440.x, 16542252.
-
(2006)
Biometrics
, vol.62
, pp. 245-253
-
-
Anderson, M.J.1
-
29
-
-
34547433545
-
Global patterns in bacterial diversity.
-
10.1073/pnas.0611525104, 2040916, 17592124
-
Lozupone CA, Knight R. Global patterns in bacterial diversity. Proc Natl Acad Sci USA 2007, 104:11436-11440. 10.1073/pnas.0611525104, 2040916, 17592124.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 11436-11440
-
-
Lozupone, C.A.1
Knight, R.2
-
30
-
-
52049092682
-
Worlds within worlds: evolution of the vertebrate gut microbiota.
-
10.1038/nrmicro1978, 2664199, 18794915
-
Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI. Worlds within worlds: evolution of the vertebrate gut microbiota. Nat Rev Microbiol 2008, 6:776-788. 10.1038/nrmicro1978, 2664199, 18794915.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 776-788
-
-
Ley, R.E.1
Lozupone, C.A.2
Hamady, M.3
Knight, R.4
Gordon, J.I.5
-
31
-
-
77950665296
-
Environmental distribution of prokaryotic taxa.
-
10.1186/1471-2180-10-85, 2850351, 20307274
-
Tamames J, Abellan JJ, Pignatelli M, Camacho A, Moya A. Environmental distribution of prokaryotic taxa. BMC Microbiol 2010, 10:85. 10.1186/1471-2180-10-85, 2850351, 20307274.
-
(2010)
BMC Microbiol
, vol.10
, pp. 85
-
-
Tamames, J.1
Abellan, J.J.2
Pignatelli, M.3
Camacho, A.4
Moya, A.5
-
32
-
-
76349125984
-
Global ecological patterns in uncultured Archaea.
-
10.1038/ismej.2009.109, 19847207
-
Auguet JC, Barberan A, Casamayor EO. Global ecological patterns in uncultured Archaea. ISME J 2010, 4:182-190. 10.1038/ismej.2009.109, 19847207.
-
(2010)
ISME J
, vol.4
, pp. 182-190
-
-
Auguet, J.C.1
Barberan, A.2
Casamayor, E.O.3
-
33
-
-
67349176068
-
Genetics in geographically structured populations: defining, estimating and interpreting F(ST).
-
10.1038/nrg2611, 19687804
-
Holsinger KE, Weir BS. Genetics in geographically structured populations: defining, estimating and interpreting F(ST). Nat Rev Genet 2009, 10:639-650. 10.1038/nrg2611, 19687804.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 639-650
-
-
Holsinger, K.E.1
Weir, B.S.2
-
34
-
-
0026709389
-
Estimation of levels of gene flow from DNA sequence data.
-
1205159, 1427045
-
Hudson RR, Slatkin M, Maddison WP. Estimation of levels of gene flow from DNA sequence data. Genetics 1992, 132:583-589. 1205159, 1427045.
-
(1992)
Genetics
, vol.132
, pp. 583-589
-
-
Hudson, R.R.1
Slatkin, M.2
Maddison, W.P.3
-
35
-
-
0026050476
-
Inbreeding coefficients and coalescence times.
-
10.1017/S0016672300029827, 1765264
-
Slatkin M. Inbreeding coefficients and coalescence times. Genet Res 1991, 58:167-175. 10.1017/S0016672300029827, 1765264.
-
(1991)
Genet Res
, vol.58
, pp. 167-175
-
-
Slatkin, M.1
-
36
-
-
33747073504
-
Microbial diversity in the deep sea and the underexplored 'rare biosphere'.
-
10.1073/pnas.0605127103, 1524930, 16880384
-
Sogin ML, Morrison HG, Huber JA, Mark Welch D, Huse SM, Neal PR, Arrieta JM, Herndl GJ. Microbial diversity in the deep sea and the underexplored 'rare biosphere'. Proc Natl Acad Sci USA 2006, 103:12115-12120. 10.1073/pnas.0605127103, 1524930, 16880384.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 12115-12120
-
-
Sogin, M.L.1
Morrison, H.G.2
Huber, J.A.3
Mark Welch, D.4
Huse, S.M.5
Neal, P.R.6
Arrieta, J.M.7
Herndl, G.J.8
-
37
-
-
46249085739
-
Evolution of mammals and their gut microbes.
-
10.1126/science.1155725, 2649005, 18497261
-
Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, Bircher JS, Schlegel ML, Tucker TA, Schrenzel MD, Knight R, Gordon JI. Evolution of mammals and their gut microbes. Science 2008, 320:1647-1651. 10.1126/science.1155725, 2649005, 18497261.
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
Bircher, J.S.6
Schlegel, M.L.7
Tucker, T.A.8
Schrenzel, M.D.9
Knight, R.10
Gordon, J.I.11
-
38
-
-
63849171250
-
Global diversity in the human salivary microbiome.
-
10.1101/gr.084616.108, 2665782, 19251737
-
Nasidze I, Li J, Quinque D, Tang K, Stoneking M. Global diversity in the human salivary microbiome. Genome Res 2009, 19:636-643. 10.1101/gr.084616.108, 2665782, 19251737.
-
(2009)
Genome Res
, vol.19
, pp. 636-643
-
-
Nasidze, I.1
Li, J.2
Quinque, D.3
Tang, K.4
Stoneking, M.5
-
39
-
-
74949134895
-
Defining the healthy 'core microbiome' of oral microbial communities.
-
10.1186/1471-2180-9-259, 2805672, 20003481
-
Zaura E, Keijser BJ, Huse SM, Crielaard W. Defining the healthy 'core microbiome' of oral microbial communities. BMC Microbiol 2009, 9:259. 10.1186/1471-2180-9-259, 2805672, 20003481.
-
(2009)
BMC Microbiol
, vol.9
, pp. 259
-
-
Zaura, E.1
Keijser, B.J.2
Huse, S.M.3
Crielaard, W.4
-
40
-
-
33847305053
-
Molecular analysis of human forearm superficial skin bacterial biota.
-
10.1073/pnas.0607077104, 1815283, 17293459
-
Gao Z, Tseng CH, Pei Z, Blaser MJ. Molecular analysis of human forearm superficial skin bacterial biota. Proc Natl Acad Sci USA 2007, 104:2927-2932. 10.1073/pnas.0607077104, 1815283, 17293459.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2927-2932
-
-
Gao, Z.1
Tseng, C.H.2
Pei, Z.3
Blaser, M.J.4
-
41
-
-
77949393654
-
Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults.
-
10.1371/journal.pone.0009085, 2816710, 20140211
-
Larsen N, Vogensen FK, Berg FW, Nielsen DS, Andreasen AS, Pedersen BK, Al-Soud WA, Sorensen SJ, Hansen LH, Jakobsen M. Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. PLoS One 5:e9085. 10.1371/journal.pone.0009085, 2816710, 20140211.
-
PLoS One
, vol.5
-
-
Larsen, N.1
Vogensen, F.K.2
Berg, F.W.3
Nielsen, D.S.4
Andreasen, A.S.5
Pedersen, B.K.6
Al-Soud, W.A.7
Sorensen, S.J.8
Hansen, L.H.9
Jakobsen, M.10
-
42
-
-
33750956239
-
Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis.
-
10.1128/JCM.01004-06, 1698347, 16988016
-
Gophna U, Sommerfeld K, Gophna S, Doolittle WF, Veldhuyzen van Zanten SJ. Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis. J Clin Microbiol 2006, 44:4136-4141. 10.1128/JCM.01004-06, 1698347, 16988016.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 4136-4141
-
-
Gophna, U.1
Sommerfeld, K.2
Gophna, S.3
Doolittle, W.F.4
Veldhuyzen van Zanten, S.J.5
-
43
-
-
33747050143
-
The bacteriology of biopsies differs between newly diagnosed, untreated, Crohn's disease and ulcerative colitis patients.
-
10.1099/jmm.0.46498-0, 16849736
-
Bibiloni R, Mangold M, Madsen KL, Fedorak RN, Tannock GW. The bacteriology of biopsies differs between newly diagnosed, untreated, Crohn's disease and ulcerative colitis patients. J Med Microbiol 2006, 55:1141-1149. 10.1099/jmm.0.46498-0, 16849736.
-
(2006)
J Med Microbiol
, vol.55
, pp. 1141-1149
-
-
Bibiloni, R.1
Mangold, M.2
Madsen, K.L.3
Fedorak, R.N.4
Tannock, G.W.5
-
44
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.
-
10.1073/pnas.0706625104, 1959459, 17699621
-
Frank DN, St Amand AL, Feldman RA, Boedeker EC, Harpaz N, Pace NR. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Acad Sci USA 2007, 104:13780-13785. 10.1073/pnas.0706625104, 1959459, 17699621.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
St Amand, A.L.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
Pace, N.R.6
-
45
-
-
68649103962
-
16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis.
-
10.1038/ismej.2009.37, 2713796, 19369970
-
Wang Y, Hoenig JD, Malin KJ, Qamar S, Petrof EO, Sun J, Antonopoulos DA, Chang EB, Claud EC. 16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis. ISME J 2009, 3:944-954. 10.1038/ismej.2009.37, 2713796, 19369970.
-
(2009)
ISME J
, vol.3
, pp. 944-954
-
-
Wang, Y.1
Hoenig, J.D.2
Malin, K.J.3
Qamar, S.4
Petrof, E.O.5
Sun, J.6
Antonopoulos, D.A.7
Chang, E.B.8
Claud, E.C.9
-
46
-
-
39349107697
-
Decreased diversity of the fecal microbiome in recurrent Clostridium difficile-associated diarrhea.
-
10.1086/525047, 18199029
-
Chang JY, Antonopoulos DA, Kalra A, Tonelli A, Khalife WT, Schmidt TM, Young VB. Decreased diversity of the fecal microbiome in recurrent Clostridium difficile-associated diarrhea. J Infect Dis 2008, 197:435-438. 10.1086/525047, 18199029.
-
(2008)
J Infect Dis
, vol.197
, pp. 435-438
-
-
Chang, J.Y.1
Antonopoulos, D.A.2
Kalra, A.3
Tonelli, A.4
Khalife, W.T.5
Schmidt, T.M.6
Young, V.B.7
-
47
-
-
65649150743
-
Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls.
-
10.1099/jmm.0.007302-0, 19273648
-
Dicksved J, Lindberg M, Rosenquist M, Enroth H, Jansson JK, Engstrand L. Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls. J Med Microbiol 2009, 58:509-516. 10.1099/jmm.0.007302-0, 19273648.
-
(2009)
J Med Microbiol
, vol.58
, pp. 509-516
-
-
Dicksved, J.1
Lindberg, M.2
Rosenquist, M.3
Enroth, H.4
Jansson, J.K.5
Engstrand, L.6
-
48
-
-
31444449652
-
Molecular analysis of the bacterial microbiota in the human stomach.
-
10.1073/pnas.0506655103, 1334644, 16407106
-
Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, Francois F, Perez-Perez G, Blaser MJ, Relman DA. Molecular analysis of the bacterial microbiota in the human stomach. Proc Natl Acad Sci USA 2006, 103:732-737. 10.1073/pnas.0506655103, 1334644, 16407106.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 732-737
-
-
Bik, E.M.1
Eckburg, P.B.2
Gill, S.R.3
Nelson, K.E.4
Purdom, E.A.5
Francois, F.6
Perez-Perez, G.7
Blaser, M.J.8
Relman, D.A.9
-
49
-
-
67650473912
-
Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation.
-
10.1073/pnas.0902366106, 2700149, 19549860
-
Crawford PA, Crowley JR, Sambandam N, Muegge BD, Costello EK, Hamady M, Knight R, Gordon JI. Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation. Proc Natl Acad Sci USA 2009, 106:11276-11281. 10.1073/pnas.0902366106, 2700149, 19549860.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 11276-11281
-
-
Crawford, P.A.1
Crowley, J.R.2
Sambandam, N.3
Muegge, B.D.4
Costello, E.K.5
Hamady, M.6
Knight, R.7
Gordon, J.I.8
-
50
-
-
70350110294
-
High-fat diet determines the composition of the murine gut microbiome independently of obesity.
-
10.1053/j.gastro.2009.08.042, 19706296
-
Hildebrandt MA, Hoffmann C, Sherrill-Mix SA, Keilbaugh SA, Hamady M, Chen YY, Knight R, Ahima RS, Bushman F, Wu GD. High-fat diet determines the composition of the murine gut microbiome independently of obesity. Gastroenterology 2009, 137:1716-1724. 10.1053/j.gastro.2009.08.042, 19706296.
-
(2009)
Gastroenterology
, vol.137
, pp. 1716-1724
-
-
Hildebrandt, M.A.1
Hoffmann, C.2
Sherrill-Mix, S.A.3
Keilbaugh, S.A.4
Hamady, M.5
Chen, Y.Y.6
Knight, R.7
Ahima, R.S.8
Bushman, F.9
Wu, G.D.10
-
51
-
-
70449729817
-
The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing.
-
10.1186/1471-2180-9-210, 2759960, 19799792
-
Suchodolski JS, Dowd SE, Westermarck E, Steiner JM, Wolcott RD, Spillmann T, Harmoinen JA. The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing. BMC Microbiol 2009, 9:210. 10.1186/1471-2180-9-210, 2759960, 19799792.
-
(2009)
BMC Microbiol
, vol.9
, pp. 210
-
-
Suchodolski, J.S.1
Dowd, S.E.2
Westermarck, E.3
Steiner, J.M.4
Wolcott, R.D.5
Spillmann, T.6
Harmoinen, J.A.7
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