-
2
-
-
0037020329
-
Drug design strategies for targeting G-protein-coupled receptors
-
Klabunde, T.; Hessler, G. Drug design strategies for targeting G-protein-coupled receptors ChemBioChem 2002, 3, 928-944
-
(2002)
ChemBioChem
, vol.3
, pp. 928-944
-
-
Klabunde, T.1
Hessler, G.2
-
3
-
-
0037235663
-
Protein-based virtual screening of chemical databases. II. Are homology models of G-Protein Coupled Receptors suitable targets?
-
Bissantz, C.; Bernard, P.; Hibert, M.; Rognan, D. Protein-based virtual screening of chemical databases. II. Are homology models of G-Protein Coupled Receptors suitable targets? Proteins 2003, 50, 5-25
-
(2003)
Proteins
, vol.50
, pp. 5-25
-
-
Bissantz, C.1
Bernard, P.2
Hibert, M.3
Rognan, D.4
-
4
-
-
0034604451
-
Crystal structure of rhodopsin: A G protein-coupled receptor
-
Palczewski, K.; Kumasaka, T.; Hori, T.; Behnke, C. A.; Motoshima, H.; Fox, B. A.; Le Trong, I.; Teller, D. C.; Okada, T.; Stenkamp, R. E.; Yamamoto, M.; Miyano, M. Crystal structure of rhodopsin: A G protein-coupled receptor Science 2000, 289, 739-745
-
(2000)
Science
, vol.289
, pp. 739-745
-
-
Palczewski, K.1
Kumasaka, T.2
Hori, T.3
Behnke, C.A.4
Motoshima, H.5
Fox, B.A.6
Le Trong, I.7
Teller, D.C.8
Okada, T.9
Stenkamp, R.E.10
Yamamoto, M.11
Miyano, M.12
-
5
-
-
69049108756
-
Modern homology modeling of G-protein coupled receptors: Which structural template to use?
-
Mobarec, J. C.; Sanchez, R.; Filizola, M. Modern homology modeling of G-protein coupled receptors: Which structural template to use? J. Med. Chem. 2009, 52, 5207-5216
-
(2009)
J. Med. Chem.
, vol.52
, pp. 5207-5216
-
-
Mobarec, J.C.1
Sanchez, R.2
Filizola, M.3
-
6
-
-
36448995359
-
High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor
-
Cherezov, V.; Rosenbaum, D. M.; Hanson, M. A.; Rasmussen, S. G.; Thian, F. S.; Kobilka, T. S.; Choi, H. J.; Kuhn, P.; Weis, W. I.; Kobilka, B. K.; Stevens, R. C. High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor Science 2007, 318, 1258-1265
-
(2007)
Science
, vol.318
, pp. 1258-1265
-
-
Cherezov, V.1
Rosenbaum, D.M.2
Hanson, M.A.3
Rasmussen, S.G.4
Thian, F.S.5
Kobilka, T.S.6
Choi, H.J.7
Kuhn, P.8
Weis, W.I.9
Kobilka, B.K.10
Stevens, R.C.11
-
7
-
-
56749103466
-
The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist
-
Jaakola, V. P.; Griffith, M. T.; Hanson, M. A.; Cherezov, V.; Chien, E. Y.; Lane, J. R.; Ijzerman, A. P.; Stevens, R. C. The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist Science 2008, 322, 1211-1217
-
(2008)
Science
, vol.322
, pp. 1211-1217
-
-
Jaakola, V.P.1
Griffith, M.T.2
Hanson, M.A.3
Cherezov, V.4
Chien, E.Y.5
Lane, J.R.6
Ijzerman, A.P.7
Stevens, R.C.8
-
8
-
-
33644770260
-
Adenosine receptors as therapeutic targets
-
Jacobson, K. A.; Gao, Z. G. Adenosine receptors as therapeutic targets Nat. Rev. Drug Discovery 2006, 5, 247-264
-
(2006)
Nat. Rev. Drug Discovery
, vol.5
, pp. 247-264
-
-
Jacobson, K.A.1
Gao, Z.G.2
-
10
-
-
70349318057
-
Introduction to adenosine receptors as therapeutic targets
-
Jacobson, K. A. Introduction to adenosine receptors as therapeutic targets Handb. Exp. Pharmacol. 2009, 193, 1-24
-
(2009)
Handb. Exp. Pharmacol.
, vol.193
, pp. 1-24
-
-
Jacobson, K.A.1
-
11
-
-
38749132550
-
Adenosine receptor antagonists: Translating medicinal chemistry and pharmacology into clinical utility
-
Baraldi, P. G.; Tabrizi, M. A.; Gessi, S.; Borea, P. A. Adenosine receptor antagonists: Translating medicinal chemistry and pharmacology into clinical utility Chem. Rev. 2008, 108, 238-263
-
(2008)
Chem. Rev.
, vol.108
, pp. 238-263
-
-
Baraldi, P.G.1
Tabrizi, M.A.2
Gessi, S.3
Borea, P.A.4
-
12
-
-
0029127542
-
The in vitro pharmacology of ZM 241385, a potent, non-xanthine A2a selective adenosine receptor antagonist
-
Poucher, S. M.; Keddie, J. R.; Singh, P.; Stoggall, S. M.; Caulkett, P. W.; Jones, G.; Coll, M. G. The in vitro pharmacology of ZM 241385, a potent, non-xanthine A2a selective adenosine receptor antagonist Br. J. Pharmacol. 1995, 115, 1096-1102
-
(1995)
Br. J. Pharmacol.
, vol.115
, pp. 1096-1102
-
-
Poucher, S.M.1
Keddie, J.R.2
Singh, P.3
Stoggall, S.M.4
Caulkett, P.W.5
Jones, G.6
Coll, M.G.7
-
13
-
-
59449094359
-
Antagonists of the human A(2A) adenosine receptor. 4. Design, synthesis, and preclinical evaluation of 7-aryltriazolo[4,5-d]pyrimidines
-
Gillespie, R. J.; Bamford, S. J.; Botting, R.; Comer, M.; Denny, S.; Gaur, S.; Griffin, M.; Jordan, A. M.; Knight, A. R.; Lerpiniere, J.; Leonardi, S.; Lightowler, S.; McAteer, S.; Merrett, A.; Misra, A.; Padfield, A.; Reece, M.; Saadi, M.; Selwood, D. L.; Stratton, G. C.; Surry, D.; Todd, R.; Tong, X.; Ruston, V.; Upton, R.; Weiss, S. M. Antagonists of the human A(2A) adenosine receptor. 4. Design, synthesis, and preclinical evaluation of 7-aryltriazolo[4,5-d]pyrimidines J. Med. Chem. 2009, 52, 33-47
-
(2009)
J. Med. Chem.
, vol.52
, pp. 33-47
-
-
Gillespie, R.J.1
Bamford, S.J.2
Botting, R.3
Comer, M.4
Denny, S.5
Gaur, S.6
Griffin, M.7
Jordan, A.M.8
Knight, A.R.9
Lerpiniere, J.10
Leonardi, S.11
Lightowler, S.12
McAteer, S.13
Merrett, A.14
Misra, A.15
Padfield, A.16
Reece, M.17
Saadi, M.18
Selwood, D.L.19
Stratton, G.C.20
Surry, D.21
Todd, R.22
Tong, X.23
Ruston, V.24
Upton, R.25
Weiss, S.M.26
more..
-
14
-
-
77957055780
-
Integrated methods for the construction of three-dimensional models and computational probing of structure-function relations in G-protein coupled receptors
-
Ballesteros, J. A.; Weinstein, H. Integrated methods for the construction of three-dimensional models and computational probing of structure-function relations in G-protein coupled receptors Methods Neurosci. 1995, 25, 366-428
-
(1995)
Methods Neurosci.
, vol.25
, pp. 366-428
-
-
Ballesteros, J.A.1
Weinstein, H.2
-
15
-
-
27444442267
-
2- n -butyl-9-methyl-8-[1,2,3]triazol-2-yl-9 H -purin-6-ylamine and analogues as A2A adenosine receptor antagonists. Design, synthesis, and pharmacological characterization
-
Minetti, P.; Tinti, M. O.; Carminati, P.; Castorina, M.; Di Cesare, M. A.; Di Serio, S.; Gallo, G.; Ghirardi, O.; Giorgi, F.; Giorgi, L.; Piersanti, G.; Bartoccini, F.; Tarzia, G. 2- n -butyl-9-methyl-8-[1,2,3]triazol-2-yl-9 H -purin-6-ylamine and analogues as A2A adenosine receptor antagonists. Design, synthesis, and pharmacological characterization J. Med. Chem. 2005, 48, 6887-6896
-
(2005)
J. Med. Chem.
, vol.48
, pp. 6887-6896
-
-
Minetti, P.1
Tinti, M.O.2
Carminati, P.3
Castorina, M.4
Di Cesare, M.A.5
Di Serio, S.6
Gallo, G.7
Ghirardi, O.8
Giorgi, F.9
Giorgi, L.10
Piersanti, G.11
Bartoccini, F.12
Tarzia, G.13
-
16
-
-
40949163431
-
Role of the active-site solvent in the thermodynamics of factor Xa ligand binding
-
Abel, R.; Young, T.; Farid, R.; Berne, B. J.; Friesner, R. A. Role of the active-site solvent in the thermodynamics of factor Xa ligand binding J. Am. Chem. Soc. 2008, 130, 2817-2831
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 2817-2831
-
-
Abel, R.1
Young, T.2
Farid, R.3
Berne, B.J.4
Friesner, R.A.5
-
17
-
-
67749099405
-
High-energy water sites determine peptide binding affinity and specificity of PDZ domains
-
Beuming, T.; Farid, R.; Sherman, W. High-energy water sites determine peptide binding affinity and specificity of PDZ domains Protein Sci. 2009, 18, 1609-1619
-
(2009)
Protein Sci.
, vol.18
, pp. 1609-1619
-
-
Beuming, T.1
Farid, R.2
Sherman, W.3
-
18
-
-
77950678935
-
Understanding kinase selectivity through energetic analysis of binding site waters
-
Robinson, D. D.; Sherman, W.; Farid, R. Understanding kinase selectivity through energetic analysis of binding site waters ChemMedChem 2010, 5, 618-627
-
(2010)
ChemMedChem
, vol.5
, pp. 618-627
-
-
Robinson, D.D.1
Sherman, W.2
Farid, R.3
-
19
-
-
77951997162
-
Addressing limitations with the MM-GB/SA scoring procedure using the WaterMap method and free energy perturbation calculations
-
DOI: 10.1021/ci900497d.
-
Guimaraes, C. R.; Mathiowetz, A. M. Addressing limitations with the MM-GB/SA scoring procedure using the WaterMap method and free energy perturbation calculations. J. Chem. Inf. Model. 2010, DOI: 10.1021/ci900497d.
-
(2010)
J. Chem. Inf. Model.
-
-
Guimaraes, C.R.1
Mathiowetz, A.M.2
-
20
-
-
77955892405
-
-
Schrödinger, Inc.: Portland, OR.
-
Prime v2.1; Schrödinger, Inc.: Portland, OR.
-
Prime v2.1
-
-
-
21
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Weissig, H.; Shindyalov, I. N.; Bourne, P. E. The Protein Data Bank Nucleic Acids Res. 2000, 28, 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
22
-
-
77949382565
-
-
Schrödinger, Inc.: Portland, OR.
-
Maestro v9.0; Schrödinger, Inc.: Portland, OR.
-
Maestro v9.0
-
-
-
23
-
-
77955868019
-
-
Schrödinger, Inc.: Portland, OR.
-
LigPrep v2.3; Schrödinger, Inc.: Portland, OR.
-
LigPrep v2.3
-
-
-
24
-
-
77955877267
-
-
Schrödinger, Inc.: Portland, OR.
-
Glide v5.5; Schrödinger, Inc.: Portland, OR.
-
Glide v5.5
-
-
-
25
-
-
33750124980
-
Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes
-
Friesner, R. A.; Murphy, R. B.; Repasky, M. P.; Frye, L. L.; Greenwood, J. R.; Halgren, T. A.; Sanschagrin, P. C.; Mainz, D. T. Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes J. Med. Chem. 2006, 49, 6177-6196
-
(2006)
J. Med. Chem.
, vol.49
, pp. 6177-6196
-
-
Friesner, R.A.1
Murphy, R.B.2
Repasky, M.P.3
Frye, L.L.4
Greenwood, J.R.5
Halgren, T.A.6
Sanschagrin, P.C.7
Mainz, D.T.8
-
26
-
-
12144289984
-
Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy
-
Friesner, R. A.; Banks, J. L.; Murphy, R. B.; Halgren, T. A.; Klicic, J. J.; Mainz, D. T.; Repasky, M. P.; Knoll, E. H.; Shelley, M.; Perry, J. K.; Shaw, D. E.; Francis, P.; Shenkin, P. S. Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy J. Med. Chem. 2004, 47, 1739-1749
-
(2004)
J. Med. Chem.
, vol.47
, pp. 1739-1749
-
-
Friesner, R.A.1
Banks, J.L.2
Murphy, R.B.3
Halgren, T.A.4
Klicic, J.J.5
Mainz, D.T.6
Repasky, M.P.7
Knoll, E.H.8
Shelley, M.9
Perry, J.K.10
Shaw, D.E.11
Francis, P.12
Shenkin, P.S.13
-
27
-
-
0037038549
-
Force Field Validation Using Protein Side Chain Prediction
-
Jacobson, M. P.; Kaminski, G. A.; Friesner, R. A.; Rapp, C. S. Force Field Validation Using Protein Side Chain Prediction J. Phys. Chem. B 2002, 106, 11673-11680
-
(2002)
J. Phys. Chem. B
, vol.106
, pp. 11673-11680
-
-
Jacobson, M.P.1
Kaminski, G.A.2
Friesner, R.A.3
Rapp, C.S.4
-
28
-
-
33644792311
-
What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules
-
Yu, Z.; Jacobson, M. P.; Friesner, R. A. What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules J. Comput. Chem. 2006, 27, 72-89
-
(2006)
J. Comput. Chem.
, vol.27
, pp. 72-89
-
-
Yu, Z.1
Jacobson, M.P.2
Friesner, R.A.3
-
29
-
-
2942597884
-
First-Shell Solvation of Ion Pairs: Correction of Systematic Errors in Implicit Solvent Models
-
Yu, Z.; Jacobson, M. P.; Josovitz, J.; Rapp, C. S.; Friesner, R. A. First-Shell Solvation of Ion Pairs: Correction of Systematic Errors in Implicit Solvent Models J. Phys. Chem. B 2004, 108, 6643-6654
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 6643-6654
-
-
Yu, Z.1
Jacobson, M.P.2
Josovitz, J.3
Rapp, C.S.4
Friesner, R.A.5
-
30
-
-
0036568354
-
Contributions to the binding free energy of ligands to avidin and streptavidin
-
Lazaridis, T.; Masunov, A.; Gandolfo, F. Contributions to the binding free energy of ligands to avidin and streptavidin Proteins 2002, 47, 194-208
-
(2002)
Proteins
, vol.47
, pp. 194-208
-
-
Lazaridis, T.1
Masunov, A.2
Gandolfo, F.3
-
31
-
-
9644258919
-
The cost of conformational order: Entropy changes in molecular associations
-
Searle, M. S.; Williams, D. H. The cost of conformational order: Entropy changes in molecular associations J. Am. Chem. Soc. 1992, 114, 10690-10697
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10690-10697
-
-
Searle, M.S.1
Williams, D.H.2
|