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Volumn 88, Issue 1, 2010, Pages 155-165

A novel metagenome-derived β-galactosidase: Gene cloning, overexpression, purification and characterization

Author keywords

galactosidase; Cold adapted activity; Enzyme characterization; Gene cloning; Metagenome

Indexed keywords

COLD-ADAPTED ACTIVITY; ENZYME CHARACTERIZATION; GALACTOSIDASES; GENE CLONING; METAGENOMES;

EID: 77955848869     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-010-2744-7     Document Type: Article
Times cited : (56)

References (34)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • 1:CAS:528:DyaK2MXkvVGmurk%3D
    • RI Amann W Ludwig KH Schleifer 1995 Phylogenetic identification and in situ detection of individual microbial cells without cultivation Microbiol Rev 59 143 169 1:CAS:528:DyaK2MXkvVGmurk%3D
    • (1995) Microbiol Rev , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 2
    • 70350200860 scopus 로고    scopus 로고
    • A new β-galactosidase with a low temperature optimum isolated from the Antarctic Arthrobacter sp. 20B: Gene cloning, purification and characterization
    • 10.1007/s00203-009-0509-4
    • AM Białkowska H Cieśliński KM Nowakowska J Kur M Turkiewicz 2009 A new β-galactosidase with a low temperature optimum isolated from the Antarctic Arthrobacter sp. 20B: gene cloning, purification and characterization Arch Microbiol 191 825 835 10.1007/s00203-009-0509-4
    • (2009) Arch Microbiol , vol.191 , pp. 825-835
    • Białkowska, A.M.1    Cieśliński, H.2    Nowakowska, K.M.3    Kur, J.4    Turkiewicz, M.5
  • 3
    • 0017184389 scopus 로고
    • A rapid and sensitive for the quantitation of microgram quantitites of protein utilizing the principle of protein-dye binding
    • 10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
    • MM Bradford 1976 A rapid and sensitive for the quantitation of microgram quantitites of protein utilizing the principle of protein-dye binding Anal Biochem 72 248 254 10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 4
    • 0033955337 scopus 로고    scopus 로고
    • Heterologous protein expression in the methylotrophic yeast Pichia pastoris
    • 10.1111/j.1574-6976.2000.tb00532.x 1:CAS:528:DC%2BD3cXltVClug%3D%3D
    • JL Cereghino JM Cregg 2000 Heterologous protein expression in the methylotrophic yeast Pichia pastoris FEMS microbiol Rev 24 45 66 10.1111/j.1574-6976.2000.tb00532.x 1:CAS:528:DC%2BD3cXltVClug%3D%3D
    • (2000) FEMS Microbiol Rev , vol.24 , pp. 45-66
    • Cereghino, J.L.1    Cregg, J.M.2
  • 5
    • 10644257663 scopus 로고    scopus 로고
    • Cloning, expression, and purification of a recombinant cold-adapted β-Galactosidase from Antarctic bacterium Pseudoalteromonas sp. 22b
    • 10.1016/j.pep.2004.09.002
    • H Cieśliński J Kur A Białkowska I Baran K Makowski M Turkiewicz 2005 Cloning, expression, and purification of a recombinant cold-adapted β-Galactosidase from Antarctic bacterium Pseudoalteromonas sp. 22b Protein Expr Purif 39 27 34 10.1016/j.pep.2004.09.002
    • (2005) Protein Expr Purif , vol.39 , pp. 27-34
    • Cieśliński, H.1    Kur, J.2    Białkowska, A.3    Baran, I.4    Makowski, K.5    Turkiewicz, M.6
  • 6
    • 0041335427 scopus 로고    scopus 로고
    • Biochemical characterization of a β-galactosidase with a low temperature optimum obtained from an Antarctic Arthrobacter isolate
    • 10.1128/JB.185.18.5473-5482.2003 1:CAS:528:DC%2BD3sXnt1Wktr4%3D
    • JA Coker PP Sheridan J Loveland-Curtze KR Gutshall AJ Auman JE Brenchley 2003 Biochemical characterization of a β-galactosidase with a low temperature optimum obtained from an Antarctic Arthrobacter isolate J Bacteriol 185 5473 5482 10.1128/JB.185.18.5473-5482.2003 1:CAS:528:DC%2BD3sXnt1Wktr4%3D
    • (2003) J Bacteriol , vol.185 , pp. 5473-5482
    • Coker, J.A.1    Sheridan, P.P.2    Loveland-Curtze, J.3    Gutshall, K.R.4    Auman, A.J.5    Brenchley, J.E.6
  • 7
    • 0032729449 scopus 로고    scopus 로고
    • Biochemical and phylogenetical analyses of a cold-active β-galactosidase from the lactic acid bacterium Carnobacterium piscicola BA
    • 1:CAS:528:DyaK1MXnvVGjtb0%3D
    • JM Coombs JE Brenchley 1999 Biochemical and phylogenetical analyses of a cold-active β-galactosidase from the lactic acid bacterium Carnobacterium piscicola BA Appl Environ Microbiol 65 5443 5450 1:CAS:528:DyaK1MXnvVGjtb0%3D
    • (1999) Appl Environ Microbiol , vol.65 , pp. 5443-5450
    • Coombs, J.M.1    Brenchley, J.E.2
  • 8
    • 23944487811 scopus 로고    scopus 로고
    • Exploring microbial diversity-a vast below
    • 10.1126/science.1118176 1:CAS:528:DC%2BD2MXps1Cjtb8%3D
    • TP Curtis WT Sloan 2005 Exploring microbial diversity-a vast below Science 309 1331 1333 10.1126/science.1118176 1:CAS:528:DC%2BD2MXps1Cjtb8%3D
    • (2005) Science , vol.309 , pp. 1331-1333
    • Curtis, T.P.1    Sloan, W.T.2
  • 9
    • 19144366982 scopus 로고    scopus 로고
    • The metagenomics of soil
    • 10.1038/nrmicro1160 1:CAS:528:DC%2BD2MXksFKmsL8%3D
    • R Daniel 2005 The metagenomics of soil Nat Rev Microbiol 3 470 478 10.1038/nrmicro1160 1:CAS:528:DC%2BD2MXksFKmsL8%3D
    • (2005) Nat Rev Microbiol , vol.3 , pp. 470-478
    • Daniel, R.1
  • 10
    • 0036191816 scopus 로고    scopus 로고
    • β-Galactosidase from a cold-adapted bacterium: Purification, characterization and application for lactose hydrolysis
    • 10.1007/s00253-001-0905-4 1:CAS:528:DC%2BD38XisFOgsbg%3D
    • S Fernandes B Geueke O Delgado J Coleman R Hatti-Kaul 2002 β-Galactosidase from a cold-adapted bacterium: purification, characterization and application for lactose hydrolysis Appl Microbiol Biotechnol 58 313 321 10.1007/s00253-001-0905-4 1:CAS:528:DC%2BD38XisFOgsbg%3D
    • (2002) Appl Microbiol Biotechnol , vol.58 , pp. 313-321
    • Fernandes, S.1    Geueke, B.2    Delgado, O.3    Coleman, J.4    Hatti-Kaul, R.5
  • 11
    • 23944525404 scopus 로고    scopus 로고
    • Computational improvements reveal great bacterial diversity and high metal toxicity in soil
    • 10.1126/science.1112665 1:CAS:528:DC%2BD2MXovVOjtLk%3D
    • J Gans M Wolinsky J Dunbar 2005 Computational improvements reveal great bacterial diversity and high metal toxicity in soil Science 309 1387 1390 10.1126/science.1112665 1:CAS:528:DC%2BD2MXovVOjtLk%3D
    • (2005) Science , vol.309 , pp. 1387-1390
    • Gans, J.1    Wolinsky, M.2    Dunbar, J.3
  • 12
    • 0028913174 scopus 로고
    • Analysis of a novel gene and β-galactosidase isozyme from a psychrotrophic Arthrobacter isolate
    • 1:CAS:528:DyaK2MXkvFelsr0%3D
    • KR Gutshall DE Trimbur JJ Kasmir JE Brenchley 1995 Analysis of a novel gene and β-galactosidase isozyme from a psychrotrophic Arthrobacter isolate J Bacteriol 177 1981 1988 1:CAS:528:DyaK2MXkvFelsr0%3D
    • (1995) J Bacteriol , vol.177 , pp. 1981-1988
    • Gutshall, K.R.1    Trimbur, D.E.2    Kasmir, J.J.3    Brenchley, J.E.4
  • 13
    • 0030971550 scopus 로고    scopus 로고
    • A novel Arthrobacter β-galactosidase with homology to eucaryotic β-galactosidases
    • 1:CAS:528:DyaK2sXjtVCrt7o%3D
    • K Gutshall K Wang JE Brenchley 1997 A novel Arthrobacter β-galactosidase with homology to eucaryotic β-galactosidases J Bacteriol 179 3064 3067 1:CAS:528:DyaK2sXjtVCrt7o%3D
    • (1997) J Bacteriol , vol.179 , pp. 3064-3067
    • Gutshall, K.1    Wang, K.2    Brenchley, J.E.3
  • 14
    • 0032192790 scopus 로고    scopus 로고
    • Molecular biological access to the chemistry of unknown soil microbes: A new frontier for natural products
    • 10.1016/S1074-5521(98)90108-9 1:CAS:528:DyaK1cXntVSgt7k%3D
    • J Handelsman MR Rondon SF Brady J Clardy RM Goodman 1998 Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products Chem Biol 5 R245 R249 10.1016/S1074-5521(98)90108-9 1:CAS:528:DyaK1cXntVSgt7k%3D
    • (1998) Chem Biol , vol.5
    • Handelsman, J.1    Rondon, M.R.2    Brady, S.F.3    Clardy, J.4    Goodman, R.M.5
  • 15
    • 33846247798 scopus 로고    scopus 로고
    • Metagenomic approach for the isolation of a novel low-temperature-active lipase from uncultured bacteria of marine sediment
    • 10.1111/j.1574-6941.2006.00206.x
    • F Hårdeman S Sjöling 2007 Metagenomic approach for the isolation of a novel low-temperature-active lipase from uncultured bacteria of marine sediment FEMS Microbiol Ecol 59 524 534 10.1111/j.1574-6941.2006.00206.x
    • (2007) FEMS Microbiol Ecol , vol.59 , pp. 524-534
    • Hårdeman, F.1    Sjöling, S.2
  • 16
    • 68849126686 scopus 로고    scopus 로고
    • A new cold-adapted β-D-galactosidase from the Antarctic Arthrobacter sp. 32c-gene cloning, overexpression, purification and properties
    • 10.1186/1471-2180-9-151
    • P Hildebrandt M Wanarska J Kur 2009 A new cold-adapted β-D-galactosidase from the Antarctic Arthrobacter sp. 32c-gene cloning, overexpression, purification and properties BMC microbiol 9 151 10.1186/1471-2180-9-151
    • (2009) BMC Microbiol , vol.9 , pp. 151
    • Hildebrandt, P.1    Wanarska, M.2    Kur, J.3
  • 17
    • 0035319361 scopus 로고    scopus 로고
    • Cold-adapted β-Galactosidase from the Antarctic psychrophile Pseudoalteromonas haloplanktis
    • 10.1128/AEM.67.4.1529-1535.2001 1:CAS:528:DC%2BD3MXis1egsb0%3D
    • A Hoyoux I Jennes P Dubois S Genicot F Dubail JM Francois E Baise G Feller C Gerday 2001 Cold-adapted β-Galactosidase from the Antarctic psychrophile Pseudoalteromonas haloplanktis Appl Environ Microbiol 67 1529 1535 10.1128/AEM.67.4.1529-1535.2001 1:CAS:528:DC%2BD3MXis1egsb0%3D
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1529-1535
    • Hoyoux, A.1    Jennes, I.2    Dubois, P.3    Genicot, S.4    Dubail, F.5    Francois, J.M.6    Baise, E.7    Feller, G.8    Gerday, C.9
  • 18
    • 34147132399 scopus 로고    scopus 로고
    • Molecular cloning and characterization of the gene encoding cold-active beta-galactosidase from a psychrotrophic and halotolerant Planococcus sp. L4
    • 10.1021/jf062910r 1:CAS:528:DC%2BD2sXitFCmsbw%3D
    • JM Hu H Li LX Cao PC Wu CT Zhang SL Sang XY Zhang MJ Chen JQ Lu YH Liu 2007 Molecular cloning and characterization of the gene encoding cold-active beta-galactosidase from a psychrotrophic and halotolerant Planococcus sp. L4 J Agric Food Chem 55 2217 2224 10.1021/jf062910r 1:CAS:528:DC%2BD2sXitFCmsbw%3D
    • (2007) J Agric Food Chem , vol.55 , pp. 2217-2224
    • Hu, J.M.1    Li, H.2    Cao, L.X.3    Wu, P.C.4    Zhang, C.T.5    Sang, S.L.6    Zhang, X.Y.7    Chen, M.J.8    Lu, J.Q.9    Liu, Y.H.10
  • 19
    • 0141670507 scopus 로고    scopus 로고
    • The cloning, purification and characterization of a cold-active β-Galactosidase from the psychrotolerant Antarctic bacterium Arthrobacter sp. C2-2
    • 10.1016/S0141-0229(03)00211-4
    • P Karasová-Lipovová H Strnad V Spiwok S Malá B Králová NJ Russell 2003 The cloning, purification and characterization of a cold-active β-Galactosidase from the psychrotolerant Antarctic bacterium Arthrobacter sp. C2-2 Enzyme Microb Technol 33 836 844 10.1016/S0141-0229(03)00211-4
    • (2003) Enzyme Microb Technol , vol.33 , pp. 836-844
    • Karasová-Lipovová, P.1    Strnad, H.2    Spiwok, V.3    Malá, S.4    Králová, B.5    Russell, N.J.6
  • 20
    • 0028314161 scopus 로고
    • Properties of cold-adapted microorganisms and their potential role in biotechnology
    • 10.1016/0168-1656(94)90093-0 1:CAS:528:DyaK2cXis1Ggur4%3D
    • R Margesin F Schinner 1994 Properties of cold-adapted microorganisms and their potential role in biotechnology J Biotechnol 33 1 14 10.1016/0168-1656(94) 90093-0 1:CAS:528:DyaK2cXis1Ggur4%3D
    • (1994) J Biotechnol , vol.33 , pp. 1-14
    • Margesin, R.1    Schinner, F.2
  • 21
    • 33749020794 scopus 로고    scopus 로고
    • Purification and molecular characterization of cold-active beta-galactosidase from Arthrobacter psychrolactophilus strain F2
    • 10.1007/s00253-006-0339-0 1:CAS:528:DC%2BD28XpvF2mu7w%3D
    • T Nakagawa Y Fujimoto R Ikehata T Miyaji N Tomizuka 2006 Purification and molecular characterization of cold-active beta-galactosidase from Arthrobacter psychrolactophilus strain F2 Appl Microbiol Biotechnol 72 720 725 10.1007/s00253-006-0339-0 1:CAS:528:DC%2BD28XpvF2mu7w%3D
    • (2006) Appl Microbiol Biotechnol , vol.72 , pp. 720-725
    • Nakagawa, T.1    Fujimoto, Y.2    Ikehata, R.3    Miyaji, T.4    Tomizuka, N.5
  • 22
    • 34249074067 scopus 로고    scopus 로고
    • Overexpression and functional analysis of cold-active β-galactosidase from Arthrobacter psychrolactophilus strain F2
    • 10.1016/j.pep.2007.03.010 1:CAS:528:DC%2BD2sXlvVOqsb4%3D
    • T Nakagawa R Ikehata T Myoda T Miyaji N Tomizuka 2007 Overexpression and functional analysis of cold-active β-galactosidase from Arthrobacter psychrolactophilus strain F2 Protein Expr Purif 54 295 299 10.1016/j.pep.2007. 03.010 1:CAS:528:DC%2BD2sXlvVOqsb4%3D
    • (2007) Protein Expr Purif , vol.54 , pp. 295-299
    • Nakagawa, T.1    Ikehata, R.2    Myoda, T.3    Miyaji, T.4    Tomizuka, N.5
  • 24
    • 0026176947 scopus 로고
    • Specificity, inhibitory studies, and oligosaccharide formation by β-Galactosidase from psychrotrophic Bacillus subtilis KL88
    • 10.3168/jds.S0022-0302(91)78341-0 1:CAS:528:DyaK3MXks1Ogu7Y%3D
    • KAA Rahim BH Lee 1991 Specificity, inhibitory studies, and oligosaccharide formation by β-Galactosidase from psychrotrophic Bacillus subtilis KL88 J Dairy Sci 74 1773 1778 10.3168/jds.S0022-0302(91)78341-0 1:CAS:528:DyaK3MXks1Ogu7Y%3D
    • (1991) J Dairy Sci , vol.74 , pp. 1773-1778
    • Rahim, K.A.A.1    Lee, B.H.2
  • 25
    • 0242523909 scopus 로고    scopus 로고
    • The uncultured microbial majority
    • 10.1146/annurev.micro.57.030502.090759
    • MS Rappé SJ Giovannoni 2003 The uncultured microbial majority Annu Rev Microbiol 57 369 394 10.1146/annurev.micro.57.030502.090759
    • (2003) Annu Rev Microbiol , vol.57 , pp. 369-394
    • Rappé, M.S.1    Giovannoni, S.J.2
  • 26
    • 13544253396 scopus 로고    scopus 로고
    • New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library
    • 10.1128/AEM.71.2.817-825.2005 1:CAS:528:DC%2BD2MXhsVKgsbo%3D
    • JK Rhee DG Ahn YG Kim JW Oh 2005 New thermophilic and thermostable esterase with sequence similarity to the hormone-sensitive lipase family, cloned from a metagenomic library Appl Environ Microbiol 71 817 825 10.1128/AEM.71.2.817-825.2005 1:CAS:528:DC%2BD2MXhsVKgsbo%3D
    • (2005) Appl Environ Microbiol , vol.71 , pp. 817-825
    • Rhee, J.K.1    Ahn, D.G.2    Kim, Y.G.3    Oh, J.W.4
  • 27
    • 0031608378 scopus 로고    scopus 로고
    • Molecular adaptations in psychrophilic bacteria: Potential for biotechnological applications
    • 1:CAS:528:DyaK1cXltF2lur8%3D
    • NJ Russell 1998 Molecular adaptations in psychrophilic bacteria: potential for biotechnological applications Adv Biochem Eng Biotechnol 61 1 21 1:CAS:528:DyaK1cXltF2lur8%3D
    • (1998) Adv Biochem Eng Biotechnol , vol.61 , pp. 1-21
    • Russell, N.J.1
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • 1:STN:280:DyaL1c7ovFSjsA%3D%3D
    • N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425 1:STN:280: DyaL1c7ovFSjsA%3D%3D
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 30
    • 0034080264 scopus 로고    scopus 로고
    • Characterization of a salt-tolerant family 42 β-galactosidase from a psychrophilic Antarctic Planococcus isolate
    • 10.1128/AEM.66.6.2438-2444.2000 1:CAS:528:DC%2BD3cXjvFWnsrs%3D
    • PP Sheridan JE Brenchley 2000 Characterization of a salt-tolerant family 42 β-galactosidase from a psychrophilic Antarctic Planococcus isolate Appl Environ Microbiol 66 2438 2444 10.1128/AEM.66.6.2438-2444.2000 1:CAS:528:DC%2BD3cXjvFWnsrs%3D
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2438-2444
    • Sheridan, P.P.1    Brenchley, J.E.2
  • 31
    • 55249118224 scopus 로고    scopus 로고
    • Advances in recovery of novel biocatalysts from metagenomes
    • 10.1159/000142892 1:CAS:528:DC%2BD1cXht12kurfK
    • HL Steele KE Jaeger R Daniel WR Streit 2009 Advances in recovery of novel biocatalysts from metagenomes J Mol Microbiol Biotechnol 16 25 37 10.1159/000142892 1:CAS:528:DC%2BD1cXht12kurfK
    • (2009) J Mol Microbiol Biotechnol , vol.16 , pp. 25-37
    • Steele, H.L.1    Jaeger, K.E.2    Daniel, R.3    Streit, W.R.4
  • 32
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • 10.1093/molbev/msm092 1:CAS:528:DC%2BD2sXpsVGrsL8%3D
    • K Tamura J Dudley M Nei S Kumar 2007 MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 Mol Biol Evol 24 1596 1599 10.1093/molbev/msm092 1:CAS:528:DC%2BD2sXpsVGrsL8%3D
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • 10.1093/nar/25.24.4876 1:CAS:528:DyaK1cXntFyntQ%3D%3D
    • JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4882 10.1093/nar/25.24.4876 1:CAS:528:DyaK1cXntFyntQ%3D%3D
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 34
    • 0028117834 scopus 로고
    • Characterization of a psychrotrophic Arthrobacter gene and its cold-active β-galactosidase
    • DE Timbur KR Gutshall P Prema JE Brenchley 1994 Characterization of a psychrotrophic Arthrobacter gene and its cold-active β-galactosidase Appl Environ Microbiol 60 4544 4552
    • (1994) Appl Environ Microbiol , vol.60 , pp. 4544-4552
    • Timbur, D.E.1    Gutshall, K.R.2    Prema, P.3    Brenchley, J.E.4


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