Reexamining the DNA target selectivity of Scalloped

Genome

Volumn 53, Issue 8, 2010, Pages 575-584

  Garg, A ^a   Bell, J ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Drosophila; Scalloped; Selector proteins; Vestigial; Wings

Indexed keywords

DNA; DROSOPHILA PROTEIN; HYBRID PROTEIN; SCALLOPED PROTEIN, DROSOPHILA; TRANSACTIVATOR PROTEIN; TRANSCRIPTION FACTOR;

ANIMAL; ANIMAL EMBRYO; ARTICLE; BINDING SITE; DOWN REGULATION; DROSOPHILA MELANOGASTER; ENHANCER REGION; ENZYME SPECIFICITY; FORELIMB; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; PHYSIOLOGY; PRENATAL DEVELOPMENT; PROTEIN BINDING; TRANSCRIPTION INITIATION; TRANSGENIC ANIMAL;

ANIMALS; ANIMALS, GENETICALLY MODIFIED; BINDING SITES; DNA; DOWN-REGULATION; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; EMBRYO, NONMAMMALIAN; ENHANCER ELEMENTS, GENETIC; GENE EXPRESSION REGULATION, DEVELOPMENTAL; HERPES SIMPLEX VIRUS PROTEIN VMW65; PROTEIN BINDING; RECOMBINANT FUSION PROTEINS; SUBSTRATE SPECIFICITY; TRANSCRIPTION FACTORS; TRANSCRIPTIONAL ACTIVATION; WING;

EID: 77955523259     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G10-029     Document Type: Article

References (33)

1. Bandura, J.L., and Edgar, B.A. 2008. Yorkie and Scalloped: part- ners in growth activation. Dev. Cell, 14(3): 315-316. doi:10.1016/j.devcel.2008.02.010. PMID:18331708.
2. Callaerts, P., Leng, S., Clements, J., Benassayag, C., Cribbs, D., Kang, Y.Y., et al. 2001. Drosophila Pax-6/eyeless is essential for normal adult brain structure and function. J. Neurobiol. 46(2): 73-88. doi:10.1002/1097-4695(20010205)46:2<73::AID-NEU10>3.0.CO;2-N. PMID:11153010.
3. Chan, S.K., and Mann, R.S. 1996. A structural model for a homeo- tic protein-extradenticle-DNA complex accounts for the choice of HOX protein in the heterodimer. Proc. Natl. Acad. Sci. U.S.A. 93(11): 5223-5228. doi:10.1073/pnas.93.11.5223. PMID: 8643557.
4. Chan, S.K., Popperl, H., Krumlauf, R., and Mann, R.S. 1996. An extradenticle-induced conformational change in a HOX protein overcomes an inhibitory function of the conserved hexapeptide motif. EMBO J. 15(10): 2476-2487. PMID:8665855.
5. Chang, C.P., Brocchieri, L., Shen, W.F., Largman, C., and Cleary, M.L. 1996. Pbx modulation of Hox homeodomain amino-terminal arms establishes different DNA-binding specificities across the Hox locus. Mol. Cell. Biol. 16(4): 1734-1745. PMID:8657149.
6. Chow, L., Berube, J., Fromont, A., and Bell, J.B. 2004. Ability of scalloped deletion constructs to rescue sd mutant wing pheno- types in Drosophila melanogaster. Genome, 47(5): 849-859. doi:10.1139/g04-060. PMID:15499399.
7. Cooper, T.A., and Ordahl, C.P. 1985. A single cardiac troponin T gene generates embryonic and adult isoforms via developmen- tally regulated alternate splicing. J. Biol. Chem. 260(20): 11140-11148. PMID:2993302.
8. Davidson, I., Xiao, J.H., Rosales, R., Staub, A., and Chambon, P. 1988. The HeLa cell protein TEF-1 binds specifically and coop- eratively to two SV40 enhancer motifs of unrelated sequence. Cell, 54(7): 931-942. doi:10.1016/0092-8674(88)90108-0. PMID:2843293.
9. Garg, A., Srivastava, A., Davis, M.M., O'Keefe, S.L., Chow, L., and Bell, J.B. 2007. Antagonizing Scalloped with a novel Vesti- gial construct reveals an important role for Scalloped in Droso- phila melanogaster leg, eye and optic lobe development. Genetics, 175(2): 659-669. doi:10.1534/genetics.106.063966. PMID:17110491.
10. Gorfinkiel, N., Morata, G., and Guerrero, I. 1997. The homeobox gene Distal-less induces ventral appendage development in Dro- sophila. Genes Dev. 11(17): 2259-2271. doi:10.1101/gad.11.17. 2259. PMID:9303541.
11. Guss, K.A., Nelson, C.E., Hudson, A., Kraus, M.E., and Carroll, S.B. 2001. Control of a genetic regulatory network by a selector gene. Science, 292(5519): 1164-1167. doi:10.1126/science. 1058312. PMID:11303087.
12. Halder, G., and Carroll, S.B. 2001. Binding of the Vestigial co- factor switches the DNA-target selectivity of the Scalloped se- lector protein. Development, 128(17): 3295-3305. PMID: 11546746.
13. Halder, G., Callaerts, P., and Gehring, W.J. 1995. Induction of ec- topic eyes by targeted expression of the eyeless gene in Droso- phila. Science, 267(5205): 1788-1792. doi:10.1126/science. 7892602. PMID:7892602.
14. Halder, G., Polaczyk, P., Kraus, M.E., Hudson, A., Kim, J., Laughon, A., and Carroll, S. 1998. The Vestigial and Scalloped proteins act together to directly regulate wing-specific gene ex- pression in Drosophila. Genes Dev. 12(24): 3900-3909. doi:10. 1101/gad.12.24.3900. PMID:9869643.
15. Jacquemin, P., Martial, J.A., and Davidson, I. 1997. Human TEF-5 is preferentially expressed in placenta and binds to multiple func- tional elements of the human chorionic somatomammotropin-B gene enhancer. J. Biol. Chem. 272(20): 12928-12937. doi:10. 1074/jbc.272.20.12928. PMID:9148898.
16. Kim, J., Sebring, A., Esch, J.J., Kraus, M.E., Vorwerk, K., Magee, J., and Carroll, S.B. 1996. Integration of positional signals and regulation of wing formation and identity by Drosophila vesti- gial gene. Nature, 382(6587): 133-138. doi:10.1038/382133a0. PMID:8700202.
17. Knoepfler, P.S., Lu, Q., and Kamps, M.P. 1996. Pbx1-Hox heterodimers bind DNA on inseparable half-sites that permit intrinsic DNA binding specificity of the Hox partner at nucleotides 3' to a TAAT motif. Nucleic Acids Res. 24(12): 2288-2294. doi:10.1093/nar/24.12.2288. PMID:8710498.
18. Liu, X., Grammont, M., and Irvine, K.D. 2000. Roles for scalloped and vestigial in regulating cell affinity and interactions between the wing blade and the wing hinge. Dev. Biol. 228(2): 287-303. doi:10.1006/dbio.2000.9939. PMID:11112330.
19. Lunde, K., Trimble, J.L., Guichard, A., Guss, K.A., Nauber, U., and Bier, E. 2003. Activation of the knirps locus links patterning to morphogenesis of the second wing vein in Drosophila. Development, 130(2): 235-248. doi:10.1242/dev.00207. PMID:12466192.
20. MacKay, J.O., Soanes, K.H., Srivastava, A., Simmonds, A., Brook, W.J., and Bell, J.B. 2003. An in vivo analysis of the vestigial gene in Drosophila melanogaster defines the domains required for Vg function. Genetics, 163(4): 1365-1373. PMID:12702681.
21. Molkentin, J.D., and Markham, B.E. 1994. An M-CAT binding fac- tor and an RSRF-related A-rich binding factor positively regu- late expression of the a-cardiac myosin heavy-chain gene in vivo. Mol. Cell. Biol. 14(8): 5056-5065. PMID:8035789.
22. Phelan, M.L., and Featherstone, M.S. 1997. Distinct HOX N-term- inal arm residues are responsible for specificity of DNA recog- nition by HOX monomers and HOX PBX heterodimers. J. Biol. Chem. 272(13): 8635-8643. doi:10.1074/jbc.272.13.8635. PMID:9079695.
23. Quiring, R., Walldorf, U., Kloter, U., and Gehring, W.J. 1994. Homology of the eyeless gene of Drosophila to the Small eye gene in mice and Aniridia in humans. Science, 265(5173): 785- 789. doi:10.1126/science.7914031. PMID:7914031.
24. Rubin, G.M., and Spradling, A.C. 1982. Genetic transformation of Drosophila with transposable element vectors. Science, 218(4570): 348-353. doi:10.1126/science.6289436. PMID: 6289436.
25. Ryoo, H.D., and Mann, R.S. 1999. The control of trunk Hox speci- ficity and activity by Extradenticle. Genes Dev. 13(13): 1704- 1716. doi:10.1101/gad.13.13.1704. PMID:10398683.
26. Shen, W.F., Chang, C.P., Rozenfeld, S., Sauvageau, G., Humphries, R.K., Lu, M., et al. 1996. Hox homeodomain proteins exhibit se- lective complex stabilities with Pbx and DNA. Nucleic Acids Res. 24(5): 898-906. doi:10.1093/nar/24.5.898. PMID:8600458.
27. Simmonds, A.J., Liu, X., Soanes, K.H., Krause, H.M., Irvine, K.D., and Bell, J.B. 1998. Molecular interactions between Vestigial and Scalloped promote wing formation in Drosophila. Genes Dev. 12(24): 3815-3820. doi:10.1101/gad.12.24.3815. PMID:9869635.
28. Vaudin, P., Delanoue, R., Davidson, I., Silber, J., and Zider, A. 1999. TONDU (TDU), a novel human protein related to the pro- duct of vestigial (vg) gene of Drosophila melanogaster interacts with vertebrate TEF factors and substitutes for Vg function in wing formation. Development, 126(21): 4807-4816. PMID:10518497.
29. Williams, J.A., Bell, J.B., and Carroll, S.B. 1991. Control of Dro- sophila wing and haltere development by the nuclear vestigial gene product. Genes Dev. 5(12b 12B): 2481-2495. doi:10.1101/ gad.5.12b.2481. PMID:1752439.
30. Wilson, D.S., and Desplan, C. 1999. Structural basis of Hox speci- ficity. Nat. Struct. Biol. 6(4): 297-300. doi:10.1038/7524.PMID:10201389.
31. Wu, S., Liu, Y., Zheng, Y., Dong, J., and Pan, D. 2008. The TEAD/TEF family protein Scalloped mediates transcriptional output of the Hippo growth-regulatory pathway. Dev. Cell, 14(3): 388-398. doi:10.1016/j.devcel.2008.01.007. PMID: 18258486.
32. Yagi, R., Chen, L.F., Shigesada, K., Murakami, Y., and Ito, Y. 1999. A WW domain-containing Yes-associated protein (YAP) is a novel transcriptional co-activator. EMBO J. 18(9): 2551- 2562. doi:10.1093/emboj/18.9.2551. PMID:10228168.
33. Zhang, L., Ren, F., Zhang, Q., Chen, Y., Wang, B., and Jiang, J. 2008. The TEAD/TEF family of transcription factor Scalloped mediates Hippo signaling in organ size control. Dev. Cell, 14(3): 377-387. doi:10.1016/j.devcel.2008.01.006. PMID:18258485.